DN135274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTM_ARATH (Threonyl-tRNA synthetase, mitochondrial OS=Arabidopsis thaliana GN=THRRS PE=2 SV=3) HSP 1 Score: 382.489 bits (981), Expect = 1.186e-105 Identity = 183/227 (80.62%), Postives = 202/227 (88.99%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 +VRSYRELP+RLADFGVLHRNEASGAL+GLTRVRRFQQDDAHIFC Q+K EV+GVLEFIDY Y++FGFTYELKLSTRPEKYLGDL TW+KAEA L EA+ FGKP +NEGDGAFYGPKIDI+VSDA+ RKFQCATLQLDFQLP RFNL Y+AEDEAK RPVMIHRA+LGSVERMFAILLEHYKGKWPFW+SPRQAIVCP+S SQ YA +V+ I AG+YVD Sbjct: 417 RVRSYRELPMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKGEVQGVLEFIDYVYKVFGFTYELKLSTRPEKYLGDLETWDKAEADLKEAIEAFGKPLVLNEGDGAFYGPKIDITVSDAMNRKFQCATLQLDFQLPIRFNLEYAAEDEAKKSRPVMIHRAVLGSVERMFAILLEHYKGKWPFWISPRQAIVCPISEKSQQYAEKVQKQIKDAGFYVD 643
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTC_ARATH (Probable threonyl-tRNA synthetase, cytoplasmic OS=Arabidopsis thaliana GN=At1g17960 PE=2 SV=2) HSP 1 Score: 323.168 bits (827), Expect = 8.540e-88 Identity = 156/221 (70.59%), Postives = 181/221 (81.90%), Query Frame = 2 Query: 38 ELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 +LP+R+A+FGVLHRNE SGAL G+TRVRRF QDDAHIFCR Q+++EV+GVL+FIDY YRIFGFTYEL LSTRP+ ++GDL TW KAE L +AL++FGKPW I EGDGAFYGPKIDI+VSDA RKFQCAT+QLDFQLP F L Y +E + + E PVMIH A+LGS+ERMFAILLEHYKG WPFWLSPRQAIVC +S YA QV+ I GYYVD Sbjct: 169 KLPIRMAEFGVLHRNEDSGALGGMTRVRRFVQDDAHIFCRVDQVEEEVKGVLDFIDYVYRIFGFTYELTLSTRPKDHIGDLETWAKAENDLEKALDDFGKPWVIKEGDGAFYGPKIDITVSDARNRKFQCATIQLDFQLPACFKLKYLSE-KNEMEAPVMIHSAVLGSIERMFAILLEHYKGIWPFWLSPRQAIVCSLSEDCSSYAKQVQKQINEVGYYVD 388
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTC_RAT (Threonyl-tRNA synthetase, cytoplasmic OS=Rattus norvegicus GN=Tars PE=2 SV=1) HSP 1 Score: 308.916 bits (790), Expect = 1.667e-83 Identity = 146/225 (64.89%), Postives = 175/225 (77.78%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 RS+RELPLRLADFGVLHRNE SGALTGLTRVRRFQQDDAHIFC QI+DE++G L+F+ Y +FGF+++L LSTRPEK+LGD+ W +AE L +LNEFG+ W++N GDGAFYGPKIDI + DA+ R QCAT+QLDFQLP RFNL Y + D +RPV++HRAILGSVERM AIL E+Y GKWPFWLSPRQ +V PV YA +VR + A + VD Sbjct: 397 RSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWELNPGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQEFHDAKFMVD 621
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTC_HUMAN (Threonyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=TARS PE=1 SV=3) HSP 1 Score: 308.916 bits (790), Expect = 1.667e-83 Identity = 145/225 (64.44%), Postives = 175/225 (77.78%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 RS+RELPLRLADFGVLHRNE SGALTGLTRVRRFQQDDAHIFC QI+DE++G L+F+ Y +FGF+++L LSTRPEK+LGD+ W++AE L +LNEFG+ W++N GDGAFYGPKIDI + DA+ R QCAT+QLDFQLP RFNL Y + D +RPV++HRAILGSVERM AIL E+Y GKWPFWLSPRQ +V PV YA +VR + A + D Sbjct: 425 RSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMAD 649
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTC_MOUSE (Threonyl-tRNA synthetase, cytoplasmic OS=Mus musculus GN=Tars PE=1 SV=2) HSP 1 Score: 307.375 bits (786), Expect = 4.849e-83 Identity = 145/225 (64.44%), Postives = 174/225 (77.33%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 RS+RELPLRLADFGVLHRNE SGALTGLTRVRRFQQDDAHIFC QI+DE++G L+F+ Y +FGF+++L LSTRPEK+LGD+ W +AE L +LNEFG+ W++N GDGAFYGPKIDI + DA+ R QCAT+QLDFQLP RFNL Y + D +RPV++HRAILGSVERM AIL E+Y GKWPFWLSPRQ +V PV YA +VR + A + D Sbjct: 424 RSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWELNPGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMAD 648
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTC_YEAST (Threonyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=THS1 PE=1 SV=2) HSP 1 Score: 306.22 bits (783), Expect = 1.080e-82 Identity = 144/227 (63.44%), Postives = 177/227 (77.97%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDE--AKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 RSYRELP R+ADFGV+HRNE SGAL+GLTRVRRFQQDDAHIFC QI+ E+ + F+ Y Y +FGF ++++LSTRPEKY+G + TW+ AE+ L AL ++G W+IN GDGAFYGPKIDI +SDAL+R QCAT+QLDFQLP+RF L + ++D+ ERPVMIHRAILGSVERM AIL EH+ GKWPFWLSPRQ +V PV Q YA VR+ ++ AG+Y D Sbjct: 432 RSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTHDQIESEIENIFNFLQYIYGVFGFEFKMELSTRPEKYVGKIETWDAAESKLESALKKWGGNWEINAGDGAFYGPKIDIMISDALRRWHQCATIQLDFQLPNRFELEFKSKDQDSESYERPVMIHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNKLHDAGFYAD 658
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTC_BOVIN (Threonyl-tRNA synthetase, cytoplasmic OS=Bos taurus GN=TARS PE=2 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.411e-82 Identity = 144/225 (64.00%), Postives = 175/225 (77.78%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 RS+RELPLR+ADFGVLHRNE SGALTGLTRVRRFQQDDAHIFC QI+DE++G L+F+ Y IFGF+++L LSTRPEK+LGD+ W +AE L +LN+FG+ W++N GDGAFYGPKIDI + DA+ R QCAT+QLDFQLP RFNL + + D ++PV+IHRAILGSVERM AIL E+Y GKWPFWLSPRQ +V PV YA +VR + A + VD Sbjct: 425 RSWRELPLRVADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSIFGFSFKLNLSTRPEKFLGDIEVWNQAEKQLENSLNDFGEKWELNPGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKKPVIIHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHNAKFMVD 649
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTC2_XENTR (Probable threonyl-tRNA synthetase 2, cytoplasmic OS=Xenopus tropicalis GN=tarsl2 PE=2 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 2.407e-82 Identity = 142/225 (63.11%), Postives = 174/225 (77.33%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 RS+RELPLR ADFGVLHRNE SG L+GLTRVRRFQQDDAHIFC QI++E+ G L+F+ Y++FGFT++L LSTRPE YLG++ W +AE L +LN+FG+PW++N GDGAFYGPKIDI + DA+ R QCAT+QLDFQLP RFNL Y ++D +RPV+IHRAILGSVERM AIL E+Y GKWPFWLSPRQ +V PV YA QV ++ AG+ + Sbjct: 516 RSWRELPLRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTMDQIQEEMNGCLQFLQSVYKVFGFTFQLHLSTRPENYLGEIEIWNEAEKQLESSLNQFGEPWKLNPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAILCENYGGKWPFWLSPRQVMVIPVGPSCDEYAQQVCKDVFEAGFMAE 740
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTC_CAEEL (Threonyl-tRNA synthetase, cytoplasmic OS=Caenorhabditis elegans GN=trs-1 PE=2 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 5.362e-82 Identity = 143/225 (63.56%), Postives = 180/225 (80.00%), Query Frame = 2 Query: 29 SYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAY-RIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 +Y ELP R ADFGVLHRNE SGALTGLTRVRRFQQDDAHIFCR+ QI +E++ L+F++YAY ++FGFT++L LSTRPE +LG++ TW+KAEA LT ALN G+ W +N GDGAFYGPKIDI++ DALKR FQCAT+QLDFQLP++F+L Y +++ + +RPVMIHRA+LGSVERM AIL E Y GKWPFWLSPRQ + V + YA V+ I+ AG+ ++ Sbjct: 425 TYNELPFRFADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRQDQISEEIKQCLDFLEYAYEKVFGFTFKLNLSTRPEGFLGNIETWDKAEADLTNALNASGRKWVLNPGDGAFYGPKIDITIQDALKRNFQCATIQLDFQLPNQFDLSY-FDEKGEKQRPVMIHRAVLGSVERMTAILTESYGGKWPFWLSPRQCKIITVHESVRDYANDVKKQIFEAGFEIE 648
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTC1_DICDI (Probable threonyl-tRNA synthetase 1, cytoplasmic OS=Dictyostelium discoideum GN=thrS1 PE=3 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 3.475e-81 Identity = 145/226 (64.16%), Postives = 176/226 (77.88%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAK-TERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 RSYRELPLR ADFGVLHRNE +GALTGLTRVR+FQQDDAHIFC I+DE+ L F+ Y Y IFGF + L+LSTRP+ +LG++A W+ AEA+L +ALN+FGKPW++N DGAFYGPKIDI ++D LKR QCAT+QLDFQLP RF+L Y ++D A+ +RPV+IHRAILGSVERM AIL+EH GKWP W+SPRQAIV V+ Y +V I AG+Y D Sbjct: 419 RSYRELPLRFADFGVLHRNELAGALTGLTRVRKFQQDDAHIFCTTEMIEDEINSCLGFMQYVYGIFGFEFGLELSTRPDNFLGEIAQWDIAEASLEKALNKFGKPWKLNPKDGAFYGPKIDIHITDCLKRSHQCATIQLDFQLPIRFDLEYQSDDAAELKKRPVIIHRAILGSVERMMAILIEHTGGKWPLWVSPRQAIVVTVNKTHNEYGQKVCKEISDAGFYCD 644 The following BLAST results are available for this feature:
BLAST of DN135274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135274 ID=DN135274; Name=DN135274; organism=Citrus sinensis; type=EST; length=701bpback to top |