DN135096
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN135096 vs. ExPASy Swiss-Prot
Match: PSB2A_ARATH (Proteasome subunit beta type-2-A OS=Arabidopsis thaliana GN=PBD1 PE=1 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 3.754e-71 Identity = 130/153 (84.97%), Postives = 142/153 (92.81%), Query Frame = 3 Query: 54 MECVFGLVGDGFTILVADTSAVHSILVLKSNEDKIMVLDSHKLIAGSGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 512 MECVFGLVG+GF I+ ADTSAVHSIL+ K+NEDKIMVLDSHKL+A SGEPGDRVQFTE++QKNVSLY+FRNGIPLTTAAAANFTRGELATALRK+PY VNIL+AGYD E+G SLYYIDYIATLHKVDK AFGYGSYFSLS MDRH+ S MSVE Sbjct: 1 MECVFGLVGNGFAIVAADTSAVHSILLHKNNEDKIMVLDSHKLVAASGEPGDRVQFTEYVQKNVSLYKFRNGIPLTTAAAANFTRGELATALRKNPYSVNILMAGYDDESGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVE 153
BLAST of DN135096 vs. ExPASy Swiss-Prot
Match: PSB2B_ARATH (Proteasome subunit beta type-2-B OS=Arabidopsis thaliana GN=PBD2 PE=1 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 1.427e-70 Identity = 129/153 (84.31%), Postives = 140/153 (91.50%), Query Frame = 3 Query: 54 MECVFGLVGDGFTILVADTSAVHSILVLKSNEDKIMVLDSHKLIAGSGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 512 MECVFGLVG+GF I+ ADTSAVHSIL+ K+ EDKIM LDSHKL+A SGEPGDRVQFTE++QKNVSLYQFRNGIPL+TAAAANFTRGELATALRK+PY VNIL+AGYDKE G SLYYIDYIATLHKVDK AFGYGSYFSLS MDRH+ S MSVE Sbjct: 1 MECVFGLVGNGFAIVAADTSAVHSILLHKNKEDKIMTLDSHKLVAASGEPGDRVQFTEYVQKNVSLYQFRNGIPLSTAAAANFTRGELATALRKNPYSVNILMAGYDKEAGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVE 153
BLAST of DN135096 vs. ExPASy Swiss-Prot
Match: PSB2_ORYSJ (Proteasome subunit beta type-2 OS=Oryza sativa subsp. japonica GN=PBD1 PE=2 SV=2) HSP 1 Score: 234.958 bits (598), Expect = 1.581e-61 Identity = 113/153 (73.86%), Postives = 130/153 (84.97%), Query Frame = 3 Query: 54 MECVFGLVGDGFTILVADTSAVHSILVLKSNEDKIMVLDSHKLIAGSGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 512 MECV G+VG F ++ ADTSAV SILV K++EDK+MVLDSHKL+ SGEPGDRVQFTEFIQKN+ LYQFRN IPL+TAA ANFTRGELATALRK+PY VN+LLAGYD + G SLYYIDYIAT HK++K AFGYGSYF LS+MD+ + MSVE Sbjct: 1 MECVIGVVGRDFAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYYIDYIATFHKIEKGAFGYGSYFCLSLMDKLYRPDMSVE 153
BLAST of DN135096 vs. ExPASy Swiss-Prot
Match: PSB2_DICDI (Proteasome subunit beta type-2 OS=Dictyostelium discoideum GN=psmB2 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 2.624e-40 Identity = 78/156 (50.00%), Postives = 107/156 (68.59%), Query Frame = 3 Query: 54 MECVFGLVGDGFTILVADTSAVHSILVLKSNEDKIMVLDSHKLIAGSGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKET---GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 512 ME + G + +AD+S HSI+ +K +EDKI+ +D HKL+ +GE GDRVQFTE+I KN+ LY RN P++T AAANF R ELAT++R PY +N++LAGYDKE G SLYY+DY+ +L K++ GY SYF L ++DRH +S+E Sbjct: 1 METLLAFKVKGGVLCLADSSVNHSIVKMKDDEDKILEIDGHKLLLSAGEAGDRVQFTEYISKNIKLYSLRNSYPMSTPAAANFIRNELATSIRSHPYSINLILAGYDKEVEDGGTSLYYMDYLGSLQKLNFGCHGYASYFLLGLLDRHHKCDLSLE 156
BLAST of DN135096 vs. ExPASy Swiss-Prot
Match: PSB2_NEUCR (Probable proteasome subunit beta type-2 OS=Neurospora crassa GN=15E6.60 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.152e-34 Identity = 74/154 (48.05%), Postives = 102/154 (66.23%), Query Frame = 3 Query: 54 MECVFGLVGDGFTILVADTSAVHSILVLKSNEDKIMVLDSHKLIAGSGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSV 509 M + G+ G FTI+ A +A+ +LK+++DK L+ H L+A SGE GD VQF E+ Q N LY RNG L+ +A ANF RGELAT+LR + PY VN+LL G D T PSLY++DY+A+L KV AA GY Y+ LS++D+H H +++ Sbjct: 1 MYVLLGITGKDFTIIAASKAAMRGATILKASDDKTRSLNKHTLMAFSGEAGDTVQFAEYTQANAQLYSMRNGTDLSPSALANFVRGELATSLRSRKPYNVNLLLGGVDPITHKPSLYWLDYLASLAKVPYAAHGYAQYYCLSILDKHHHPDITL 154
BLAST of DN135096 vs. ExPASy Swiss-Prot
Match: PSB2_RAT (Proteasome subunit beta type-2 OS=Rattus norvegicus GN=Psmb2 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 6.260e-34 Identity = 72/154 (46.75%), Postives = 103/154 (66.88%), Query Frame = 3 Query: 54 MECVFGLVGDGFTILVADTSAVHSILVLKSNEDKIMVLDSHKLIAGSGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 512 ME + G+ G + ++ +D A +I+ +K + DK+ + L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E Sbjct: 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRE 154
BLAST of DN135096 vs. ExPASy Swiss-Prot
Match: PSB2_MOUSE (Proteasome subunit beta type-2 OS=Mus musculus GN=Psmb2 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 6.260e-34 Identity = 72/154 (46.75%), Postives = 103/154 (66.88%), Query Frame = 3 Query: 54 MECVFGLVGDGFTILVADTSAVHSILVLKSNEDKIMVLDSHKLIAGSGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 512 ME + G+ G + ++ +D A +I+ +K + DK+ + L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E Sbjct: 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRE 154
BLAST of DN135096 vs. ExPASy Swiss-Prot
Match: PSB2_HUMAN (Proteasome subunit beta type-2 OS=Homo sapiens GN=PSMB2 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 6.260e-34 Identity = 72/154 (46.75%), Postives = 103/154 (66.88%), Query Frame = 3 Query: 54 MECVFGLVGDGFTILVADTSAVHSILVLKSNEDKIMVLDSHKLIAGSGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 512 ME + G+ G + ++ +D A +I+ +K + DK+ + L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E Sbjct: 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRE 154
BLAST of DN135096 vs. ExPASy Swiss-Prot
Match: PSB2_BOVIN (Proteasome subunit beta type-2 OS=Bos taurus GN=PSMB2 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.068e-33 Identity = 72/154 (46.75%), Postives = 103/154 (66.88%), Query Frame = 3 Query: 54 MECVFGLVGDGFTILVADTSAVHSILVLKSNEDKIMVLDSHKLIAGSGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 512 ME + G+ G + ++ +D A +I+ +K + DK+ + L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS++DR++ +S E Sbjct: 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRE 154
BLAST of DN135096 vs. ExPASy Swiss-Prot
Match: PSB2_SCHPO (Probable proteasome subunit beta type-2 OS=Schizosaccharomyces pombe GN=SPAC31A2.04c PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.885e-30 Identity = 66/155 (42.58%), Postives = 100/155 (64.52%), Query Frame = 3 Query: 54 MECVFGLVGDGFTILVADTSAVHSILVLKSNEDKIMVLDSHKLIAGSGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVE 512 ME + + G F + + +SAV I VLK ++DK +L+SH L+ GE GD F E+I N+SLY R+ + L+ A A+FTR +LAT+LR + PY VNILLAGY+ G P L+++DY+AT +V A GY S++ LS+ DR++ ++++ Sbjct: 1 MESLLAVQGQDFVLTASSSSAVRGITVLKPDDDKSQILNSHNLMLYCGEAGDTTNFAEYIAANISLYTLRHNLNLSPEATASFTRKQLATSLRSRKPYQVNILLAGYETNLGKPELFWLDYLATCVRVPYACQGYSSFYCLSIFDRYYKPDLTID 155 The following BLAST results are available for this feature:
BLAST of DN135096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135096 ID=DN135096; Name=DN135096; organism=Citrus sinensis; type=EST; length=514bpback to top |