DC900384
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900384 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 4.318e-64 Identity = 116/140 (82.86%), Postives = 128/140 (91.43%), Query Frame = 3 Query: 3 INSLPD--RKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSP 416 INS+ + RKTYASRT+FFY+K G LRPLAIELSLPPT S +NK +YTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWL THASMEPYIIAT+RQLS+MHP+YKLLHPHMRYTLEINA AR+SLINGGGIIE+ F+P Sbjct: 497 INSIKEDPRKTYASRTIFFYSKNGALRPLAIELSLPPTAES-ENKFVYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLRTHASMEPYIIATNRQLSTMHPVYKLLHPHMRYTLEINARARKSLINGGGIIESCFTP 635
BLAST of DC900384 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 201.445 bits (511), Expect = 1.441e-51 Identity = 92/139 (66.19%), Postives = 115/139 (82.73%), Query Frame = 3 Query: 3 INSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTR-SSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSP 416 IN++ RK YA+RT+FF +AG L+P+AIELSLPP + P+ + T +DAT++W+W LAKAHV SNDAGVHQLVNHWL THA+MEP+I+A HR +S+MHPI+KLLHPHMRYTLEINALARQSLIN G+IE+ F+P Sbjct: 495 INAIDGRKAYATRTIFFLTEAGTLKPIAIELSLPPAKPGEPRPSKVLTPPYDATSNWLWMLAKAHVSSNDAGVHQLVNHWLRTHATMEPFILAAHRHMSAMHPIFKLLHPHMRYTLEINALARQSLINADGVIESCFTP 633
BLAST of DC900384 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 7.905e-50 Identity = 93/147 (63.27%), Postives = 116/147 (78.91%), Query Frame = 3 Query: 3 INSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPEGCHGASLS 443 IN+L RK YA+RT+FF + G L+P+AIELSLPP ++K + T DAT++W+W+LAKAHV SNDAGVHQLVNHWL THA +EP+I+A HRQLS+MHPI+KLL PHMRYTLEINALARQSLI+ G+IE F+ G +G +S Sbjct: 501 INALDGRKAYATRTIFFLTRLGTLKPVAIELSLPPHGPKHRSKRVLTPPVDATSNWMWQLAKAHVSSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINALARQSLISADGVIEGGFT-AGAYGMEMS 646
BLAST of DC900384 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 194.897 bits (494), Expect = 1.348e-49 Identity = 91/139 (65.47%), Postives = 111/139 (79.86%), Query Frame = 3 Query: 3 INSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPP-TRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSP 416 IN+ RK Y +R VFF AG L+P+AIEL LPP T + K ++T DAT++W+W+LAKAHVCSNDAGVHQL+NHWL THA MEP+IIA HRQ+S+MHPI+KLL PHMRYTL+INALARQ LING G+IE+ F+P Sbjct: 481 INAQDGRKAYGTRAVFFLTAAGTLKPIAIELCLPPMTDGCKRAKRVFTPPADATSNWLWQLAKAHVCSNDAGVHQLINHWLRTHACMEPFIIAAHRQMSAMHPIFKLLKPHMRYTLKINALARQILINGDGVIESGFTP 619
BLAST of DC900384 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 7.399e-48 Identity = 87/136 (63.97%), Postives = 105/136 (77.21%), Query Frame = 3 Query: 3 INSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASF 410 + LPD Y SRTVFF + G L PLAIEL+ P + + PQ K +THG DAT W+WKLAKAHV ++D G HQLV+HWL THA +EPYIIAT+RQLS MHP+Y+LLHPH RYT+EINALAR++LIN GIIE +F Sbjct: 479 VRELPDTTLYGSRTVFFLSDEGTLMPLAIELTRPQSPTKPQWKRAFTHGSDATESWLWKLAKAHVLTHDTGYHQLVSHWLRTHACVEPYIIATNRQLSRMHPVYRLLHPHFRYTMEINALAREALINADGIIEEAF 614
BLAST of DC900384 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 2.153e-47 Identity = 92/148 (62.16%), Postives = 117/148 (79.05%), Query Frame = 3 Query: 3 INSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQ-NKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPEGCHGASLS 443 IN+L RK YA+RT+ F + G L+P+AIELSLP SS Q +K + T DAT++W+W+LAKAHV SNDAGVHQLVNHWL THA +EP+I+A HRQLS+MHPI+KLL PHMRYTLEINA+ARQ+LI+ G+IE+ F+ G +G +S Sbjct: 507 INALDGRKAYATRTILFLTRLGTLKPIAIELSLPSQSSSNQKSKRVVTPPVDATSNWMWQLAKAHVGSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINAVARQTLISADGVIESCFT-AGQYGLEIS 653
BLAST of DC900384 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 8.181e-47 Identity = 85/138 (61.59%), Postives = 105/138 (76.09%), Query Frame = 3 Query: 3 INSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSP 416 + L + YASRT+FF + LRP+AIEL+ PP + PQ K ++T G+DAT+ W+W LAK H S+DAG HQL++HWL THA EPYIIA +RQLS+MHPIY+LLHPH RYT+EINA ARQSL+NGGGIIE F P Sbjct: 477 VRELNNTTLYASRTLFFLSDDSTLRPVAIELTCPPNINKPQWKQVFTPGYDATSCWLWNLAKTHAISHDAGYHQLISHWLRTHACTEPYIIAANRQLSAMHPIYRLLHPHFRYTMEINARARQSLVNGGGIIETCFWP 614
BLAST of DC900384 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 2.085e-42 Identity = 80/139 (57.55%), Postives = 100/139 (71.94%), Query Frame = 3 Query: 3 INSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPE 419 I SL Y SRT+FF G LR LAIEL+ P + S PQ + ++T D T W+W++AKAHV ++DAG H+L+ HWL TH ++EPYIIA +RQLS MHPIY+LLHPH RYT+ INALAR LI+ GIIE SFSP+ Sbjct: 521 IRSLKHTTMYGSRTIFFLTDDGTLRLLAIELTRPASPSQPQWRQVFTPSTDTTKSWLWRMAKAHVRAHDAGHHELITHWLRTHCAVEPYIIAANRQLSEMHPIYQLLHPHFRYTMRINALARSRLISAAGIIELSFSPQ 659
BLAST of DC900384 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 2.723e-42 Identity = 80/140 (57.14%), Postives = 100/140 (71.43%), Query Frame = 3 Query: 3 INSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDA--TTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSP 416 + L Y SR +FF G LRP+AIEL+ P ++ PQ + ++T G D T W+W+LAKAH+ ++DAGVHQLV+HWL THA EPYIIA +RQLS MHP+Y+LLHPH R+T+EINA AR LIN GGIIE SF P Sbjct: 508 VRKLDGTTLYGSRALFFLTADGTLRPIAIELTRPKSKKKPQWRQVFTPGCDGSVTGSWLWQLAKAHILAHDAGVHQLVSHWLRTHACTEPYIIAANRQLSQMHPVYRLLHPHFRFTMEINAQARAMLINAGGIIEGSFVP 647
BLAST of DC900384 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 7.924e-42 Identity = 80/139 (57.55%), Postives = 101/139 (72.66%), Query Frame = 3 Query: 3 INSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPE 419 I SL Y SRTVFF G L+ LAIEL+ P + S PQ + ++T DAT W+W++AKAHV ++DAG H+L+ HWL TH ++EPYIIA +RQLS MHPIY+LL PH RYT+ INA AR +LI+ GGIIE SFSP+ Sbjct: 504 IRSLDHTTMYGSRTVFFLTDDGTLQLLAIELTRPASPSQPQWRQVFTPSTDATMSWLWRMAKAHVRAHDAGHHELITHWLRTHCAVEPYIIAANRQLSEMHPIYQLLRPHFRYTMRINARARSALISAGGIIERSFSPQ 642 The following BLAST results are available for this feature:
BLAST of DC900384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900384 ID=DC900384; Name=DC900384; organism=Citrus sinensis; type=EST; length=458bpback to top |