CX043605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM11_CUCSA (Glutamyl-tRNA reductase 1, chloroplastic OS=Cucumis sativus GN=HEMA1 PE=2 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 3.431e-71 Identity = 133/148 (89.86%), Postives = 141/148 (95.27%), Query Frame = -2 Query: 388 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQK 831 VYNVDDLKEVVAANKEDRLRKAMEAQ+II+EESKQF AWRDSLETVPTIKKLRAYAERIR AEL+KCLSKMGDDI KKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTL ETLENMHALNRMF LET+ ++ EQK+RAK+EQNQK Sbjct: 405 VYNVDDLKEVVAANKEDRLRKAMEAQSIITEESKQFEAWRDSLETVPTIKKLRAYAERIRTAELEKCLSKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSLETEIAVLEQKIRAKVEQNQK 552
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM11_ARATH (Glutamyl-tRNA reductase 1, chloroplastic OS=Arabidopsis thaliana GN=HEMA1 PE=2 SV=2) HSP 1 Score: 248.054 bits (632), Expect = 4.798e-65 Identity = 124/148 (83.78%), Postives = 135/148 (91.22%), Query Frame = -2 Query: 388 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQK 831 VYNVDDLKEVVAANKEDR+RKAMEAQ II+EES QF AWRDSLETVPTIKKLRAYAERIRVAEL+KC+SKMGDDI+KKT RAVDDLSRGIVN+ LHGPMQHLRCDGSDSRTL ETLENMHALNRM+GLE D + E+K++A EQ QK Sbjct: 398 VYNVDDLKEVVAANKEDRMRKAMEAQTIITEESTQFEAWRDSLETVPTIKKLRAYAERIRVAELEKCMSKMGDDINKKTTRAVDDLSRGIVNRFLHGPMQHLRCDGSDSRTLSETLENMHALNRMYGLEKD--ILEEKLKAMAEQQQK 543
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM12_HORVU (Glutamyl-tRNA reductase 2 (Fragment) OS=Hordeum vulgare GN=HEMA2 PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 3.218e-61 Identity = 112/148 (75.68%), Postives = 137/148 (92.57%), Query Frame = -2 Query: 391 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDD-ISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQ 831 VYNVDDLKEVV ANKEDR+RKAMEAQAII++E K+F AWRDSLETVPTIKKLR+YA+RIR +ELDKCL K+G+D ++KKTRR++++LS GIVNKLLHGP+QHLRCDGSDSRTLDETL+NMHALNRMF L+T+ ++ EQK++AK+E+ Q Sbjct: 317 VYNVDDLKEVVEANKEDRVRKAMEAQAIITQELKRFEAWRDSLETVPTIKKLRSYADRIRASELDKCLQKIGEDNLNKKTRRSIEELSTGIVNKLLHGPLQHLRCDGSDSRTLDETLDNMHALNRMFNLDTEKAVLEQKIKAKVEKTQ 464
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_ORYSJ (Glutamyl-tRNA reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os10g0502400 PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.597e-60 Identity = 111/148 (75.00%), Postives = 136/148 (91.89%), Query Frame = -2 Query: 391 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDD-ISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQ 831 VYNVDDLKEVV ANKEDRLRKAMEAQ II++E K+F AWRDSLETVPTIKKLR+YA+RIR +EL+KCL K+G+D ++KK RR++++LS GIVNKLLHGP+QHLRCDGSDSRTLDETLENMHALNRMF L+T+ ++ EQK++AK+E++Q Sbjct: 389 VYNVDDLKEVVEANKEDRLRKAMEAQTIITQELKRFEAWRDSLETVPTIKKLRSYADRIRASELEKCLQKIGEDALTKKMRRSIEELSTGIVNKLLHGPLQHLRCDGSDSRTLDETLENMHALNRMFSLDTEKAIIEQKIKAKVEKSQ 536
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_ORYSI (Glutamyl-tRNA reductase, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_033071 PE=2 SV=2) HSP 1 Score: 233.032 bits (593), Expect = 1.597e-60 Identity = 111/148 (75.00%), Postives = 136/148 (91.89%), Query Frame = -2 Query: 391 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDD-ISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQ 831 VYNVDDLKEVV ANKEDRLRKAMEAQ II++E K+F AWRDSLETVPTIKKLR+YA+RIR +EL+KCL K+G+D ++KK RR++++LS GIVNKLLHGP+QHLRCDGSDSRTLDETLENMHALNRMF L+T+ ++ EQK++AK+E++Q Sbjct: 389 VYNVDDLKEVVEANKEDRLRKAMEAQTIITQELKRFEAWRDSLETVPTIKKLRSYADRIRASELEKCLQKIGEDSLTKKMRRSIEELSTGIVNKLLHGPLQHLRCDGSDSRTLDETLENMHALNRMFSLDTEKAIIEQKIKAKVEKSQ 536
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM12_CUCSA (Glutamyl-tRNA reductase 2, chloroplastic OS=Cucumis sativus GN=HEMA2 PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.597e-60 Identity = 113/153 (73.86%), Postives = 131/153 (85.62%), Query Frame = -2 Query: 388 LKLHGVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQK 846 L+ V+NVDDLKEVVAANKEDRL+K EAQ+II EE +F AWRDSLETVPTIKK RAY ERIR AELDKCLSKMG+DI KK + A++DLS GI NKLLHGP+QHLRCDG+DSRTLDE L+NMHA+NRMF LETD S+ E+K+RAK+E+ QK Sbjct: 390 LETVSVFNVDDLKEVVAANKEDRLKKVQEAQSIIGEEINKFEAWRDSLETVPTIKKFRAYVERIRAAELDKCLSKMGEDIPKKKKVAINDLSLGIANKLLHGPIQHLRCDGNDSRTLDEILQNMHAINRMFDLETDLSVLEEKIRAKVERGQK 542
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM11_HORVU (Glutamyl-tRNA reductase 1, chloroplastic OS=Hordeum vulgare GN=HEMA1 PE=1 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 6.070e-60 Identity = 110/148 (74.32%), Postives = 135/148 (91.22%), Query Frame = -2 Query: 391 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDD-ISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQ 831 VYNVDDLKEVV ANKEDR+RKAMEAQ II++E K+F AWRDSLETVPTIKKLR+YA+RIR +EL+KCL K+G+D ++KK RR++++LS GIVNKLLHGP+QHLRCDGSDSRTLDETLENMHALNRMF L+T+ ++ EQK++AK+E+ Q Sbjct: 379 VYNVDDLKEVVEANKEDRVRKAMEAQTIITQELKRFEAWRDSLETVPTIKKLRSYADRIRASELEKCLQKIGEDNLNKKMRRSIEELSTGIVNKLLHGPLQHLRCDGSDSRTLDETLENMHALNRMFSLDTEKAVLEQKIKAKVEKTQ 526
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM13_HORVU (Glutamyl-tRNA reductase 3, chloroplastic OS=Hordeum vulgare GN=HEMA3 PE=2 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.352e-59 Identity = 108/148 (72.97%), Postives = 134/148 (90.54%), Query Frame = -2 Query: 391 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDD-ISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQ 831 VYNVDDLKEVV ANKEDRLRKAMEAQ IISEE K+F AWRDS+ETVPTIKKLR+YA+R+R +ELDKCL K+G+D ++KK RR+++ LS GIVN+LLHGP+QHLRCDG+D+RTLDETLENMHALNRMFGL+T+ ++ EQK++ K+E+ + Sbjct: 385 VYNVDDLKEVVEANKEDRLRKAMEAQTIISEELKRFEAWRDSMETVPTIKKLRSYADRVRASELDKCLQKIGEDALTKKMRRSIEQLSTGIVNRLLHGPLQHLRCDGTDNRTLDETLENMHALNRMFGLDTEKAVMEQKIKTKVEKQK 532
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM12_ARATH (Glutamyl-tRNA reductase 2, chloroplastic OS=Arabidopsis thaliana GN=HEMA2 PE=2 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 3.117e-56 Identity = 108/145 (74.48%), Postives = 126/145 (86.90%), Query Frame = -2 Query: 397 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQ 831 V+NVDDLKEVVAANKEDR+RKAM+AQAII++ESK F AWRDSLETVPTIKKLR Y ERI AE++K L KMG D++KK R+ VDDL RGIVNKLLHGPMQHLRCDG+DSRTL ETL+NM ALNRM+GL D + E+K+RAK+E+ Sbjct: 387 VFNVDDLKEVVAANKEDRVRKAMDAQAIITDESKHFEAWRDSLETVPTIKKLRGYTERIIAAEIEKSLPKMGIDMNKKMRKTVDDLIRGIVNKLLHGPMQHLRCDGNDSRTLSETLDNMQALNRMYGL--DAEILEEKIRAKVEK 529
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_TRIEI (Glutamyl-tRNA reductase OS=Trichodesmium erythraeum (strain IMS101) GN=hemA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.409e-24 Identity = 59/132 (44.70%), Postives = 83/132 (62.88%), Query Frame = -2 Query: 433 YNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTS 828 +NVDDLK VVA N+E R + AMEA+ ++ EE + F W SLETVPTI LR E IR EL+K LS++G + ++K + ++ L+RGIVNK+LH PM LR + ++ M L +F LE++ S Sbjct: 299 FNVDDLKAVVAQNRESRRQMAMEAEVLLEEEVEAFDVWWKSLETVPTINSLRQKIETIREQELEKALSRLGSEFAEKHQEVIEALTRGIVNKILHDPMVQLRA----QQDIEARRHAMETLQLLFNLESEMS 426 The following BLAST results are available for this feature:
BLAST of CX043605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 105
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043605 ID=CX043605; Name=CX043605; organism=Citrus sinensis; type=EST; length=850bpback to top |