CX043567
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.754e-49 Identity = 115/231 (49.78%), Postives = 141/231 (61.04%), Query Frame = -2 Query: 187 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXXXXXXXXXXXLSXXXXXXXXXXQLNHDWNSSNVHLMQTLTN----SSYQ----------MGGGSGEEDEDTPTGHRANALLPAWMLRHLH 837 LLKKAHEISVLCDAEV LIVFSTKGKLFEY+ DSCMER+LERYERY +AERQL + G+WTLE++KLKAR+EVLQRNQKH++GEDL L++KELQ++E Q+DS LK IRSRKNQLM +SIS ++ NH+ NSS L Q L + +YQ GG S ++ G N ++P WMLRHL+ Sbjct: 28 LLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERLLERYERYSFAERQLVPTDHTSPGSWTLEHAKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVAQQNQWDQQ----NHEINSSTFVLPQQLDSPHLGEAYQNTNVVDNGEVEGGNSSQQQ-----GAANNTVMPQWMLRHLN 249
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 4.449e-47 Identity = 112/219 (51.14%), Postives = 138/219 (63.01%), Query Frame = -2 Query: 196 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXXXXXXXXXXXLSXXXXXXXXXXQLNHDWNSSNVHLMQTLTNSS-----YQMGGGSGEEDEDTPTGHRANALLPAWMLR 837 LLKKAHEISVLCDAEVALIVFS+KGKLFEYSTDSCMERILERY+RY Y+++QL ++ + NW LE++KLKAR+EVL++N+++FMGEDL LSLKELQS+E Q+D+ +K IRSRKNQ M +SIS QL NSS+V L Q SS ++GG +G T N+LLPAWMLR Sbjct: 28 LLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESIS------ALQKKDKALQDHNNSLLKKIKEREKKTGQQEGQLVQCSNSSSVLLPQYCVTSSRDGFVERVGGENGGASSLT----EPNSLLPAWMLR 236
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.295e-46 Identity = 91/125 (72.80%), Postives = 111/125 (88.80%), Query Frame = -2 Query: 463 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 837 LLKKAHEISVLCDAEVAL+VFS KGKLFEYSTDSCME+ILERYERY YAERQL A E + N NW++EY++LKA++E+L+RNQ+H++GEDL +S KELQ++EQQ+D+ LK IRSRKNQLM SI+ Sbjct: 28 LLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSIN 152
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 186.808 bits (473), Expect = 1.295e-46 Identity = 90/125 (72.00%), Postives = 112/125 (89.60%), Query Frame = -2 Query: 463 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 837 LLKKAHEISVLCDAEVAL+VFS KGKLFEYSTDSCME+ILERYERY YAERQL A E + N NW++EY++LKA++E+L+RNQ+H++GEDL +S KELQ++EQQ+D+ LK IR+RKNQLM +SI+ Sbjct: 28 LLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESIN 152
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.919e-46 Identity = 93/125 (74.40%), Postives = 107/125 (85.60%), Query Frame = -2 Query: 463 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 837 LLKKAHEISVLCDAEV LIVFSTKGKLFEY+ DSCMERILERYERY +AE+QL + +WTLE+ KLKAR+EVLQRNQKH++GEDL LS+KELQ++E Q+DS LK IRSRKNQLM +SIS Sbjct: 28 LLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERILERYERYSFAEKQLVPTDHTSPVSWTLEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESIS 152
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.425e-46 Identity = 104/214 (48.60%), Postives = 133/214 (62.15%), Query Frame = -2 Query: 196 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXXXXXXXXXXXLSXXXXXXXXXXQLNHDWNSSNVHLMQTLTNSSYQMGGGSGEEDEDTPTGHRANALLPAWMLR 837 LLKKAHEISVLCDAEVAL++FS+KGKLFEYSTDSCME+ILERY+RY Y+++QL +I + NW LE++KLKAR+EVL++N+++FMGEDL LSLKELQS+E Q+ + +K IRSRKNQ M +SIS + NSS + LT+S G E+E + N+LLPAWMLR Sbjct: 28 LLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESIS-----ALQKKDKVLQDHNNALLKKIKEREKNTVHQEVQLIQCSNNSSILQPQYCLTSSRDGFVGRVEGENEGASSLAEPNSLLPAWMLR 236
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.431e-45 Identity = 107/226 (47.35%), Postives = 135/226 (59.73%), Query Frame = -2 Query: 187 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSISXXXXXXXXXXXXXXXXXXXXXXXXXXLSXXXXXXXXXXQLNHDWNSS---------NVHLMQTLTNSSYQMGGGSGEEDEDTPTGHRANALLPAWMLRHLH 837 LLKKAHEISVLCDAEV LIVFSTKGKLFEY+TDSCMER+LERYERY +AE+QL + G+WTLE +KLKAR+EVLQRN+K ++GEDL L++KELQ++E Q+ S LK IRSRKNQLM +SIS + NH+ NSS + HL + N++ G + G N ++P WM+RHL+ Sbjct: 28 LLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSCMERLLERYERYSFAEKQLVPTDHTSPGSWTLENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVEQQNQWDQQ----NHEINSSTFVLPQQLDSPHLGEASQNTNVVDNGEVEGGNSSQXQGAANNTVMPQWMVRHLN 249
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 2.285e-43 Identity = 86/125 (68.80%), Postives = 107/125 (85.60%), Query Frame = -2 Query: 463 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 837 LLKKA+EISVLCDAEVALI+FSTKGKL+EY+TDSCM++ILERYERY YAE+ L + E + GNW EY KLKA++E +Q+ QKH MGEDL L+LKELQ +EQQ+++ LK IRSRK+QLML+SI+ Sbjct: 28 LLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESIN 152
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.649e-43 Identity = 85/125 (68.00%), Postives = 107/125 (85.60%), Query Frame = -2 Query: 463 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 837 LLKKA+EISVLCDAEVALI+FSTKGKL++Y+TDSCM++ILERYERY YAE+ L + E + GNW EY KLKA++E +Q+ QKH MGEDL L+LKELQ +EQQ+++ LK IRSRK+QLML+SI+ Sbjct: 28 LLKKANEISVLCDAEVALIIFSTKGKLYKYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESIN 152
BLAST of CX043567 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 172.94 bits (437), Expect = 1.934e-42 Identity = 84/127 (66.14%), Postives = 111/127 (87.40%), Query Frame = -2 Query: 463 LLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNG--NWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 837 LLKKA EISVLCDAEV+LIVFS KGKLFEYS++SCME++LERYERY YAERQL A + N NW++EYS+LKA++E+L+RNQ+H++GE+L +SLK+LQ++EQQ+++ LK IRSRKNQLM +S++ Sbjct: 28 LLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLN 154 The following BLAST results are available for this feature:
BLAST of CX043567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043567 ID=CX043567; Name=CX043567; organism=Citrus sinensis; type=EST; length=838bpback to top |