CN185807
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185807 vs. ExPASy Swiss-Prot
Match: PATL1_ARATH (Patellin-1 OS=Arabidopsis thaliana GN=PATL1 PE=1 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 2.469e-44 Identity = 85/131 (64.89%), Postives = 106/131 (80.92%), Query Frame = -3 Query: 398 KSKFVFSGPSKFAETLFKYIAPEQVPVQYGGLSREGEQEFTTTDPVTEVVVKPASKYTVEIPVTERSILVWELRVLGWDVSYGAEFVPSAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDNQ 790 +SK V +GPSK A+T+FKYIAPEQVPV+YGGLS++ T + +TE +VKPA+ YT+E+P +E L WELRVLG DVSYGA+F P+ EGSY VIVSKTRK+ TDEPVI D+FK+GEPGK+V+TIDNQ Sbjct: 432 RSKMVLAGPSKSADTIFKYIAPEQVPVKYGGLSKDTP---LTEETITEAIVKPAANYTIELPASEACTLSWELRVLGADVSYGAQFEPTTEGSYAVIVSKTRKIGSTDEPVITDSFKVGEPGKIVITIDNQ 559
BLAST of CN185807 vs. ExPASy Swiss-Prot
Match: PATL2_ARATH (Patellin-2 OS=Arabidopsis thaliana GN=PATL2 PE=1 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 2.730e-43 Identity = 90/131 (68.70%), Postives = 102/131 (77.86%), Query Frame = -3 Query: 398 KSKFVFSGPSKFAETLFKYIAPEQVPVQYGGLSREGEQEFTTTDPVTEVVVKPASKYTVEIPVTERSILVWELRVLGWDVSYGAEFVPSAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDNQ 790 +SK V SGPSK AET+FKY+APE VPV+YGGLS++ FT D VTE VVK SKYT+++P TE S L WELRVLG DVSYGA+F PS E SYTVIVSK RKV TDEPVI D+FK E GKVV+TIDNQ Sbjct: 540 RSKMVLSGPSKSAETIFKYVAPEVVPVKYGGLSKDSP--FTVEDGVTEAVVKSTSKYTIDLPATEGSTLSWELRVLGADVSYGAQFEPSNEASYTVIVSKNRKVGLTDEPVITDSFKASEAGKVVITIDNQ 668
BLAST of CN185807 vs. ExPASy Swiss-Prot
Match: PATL3_ARATH (Patellin-3 OS=Arabidopsis thaliana GN=PATL3 PE=1 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 9.087e-39 Identity = 77/133 (57.89%), Postives = 101/133 (75.94%), Query Frame = -3 Query: 401 KSKFVFSGPSKFAETLFKYIAPEQVPVQYGGLSREG---EQEFTTTDPVTEVVVKPASKYTVEIPVTERSILVWELRVLGWDVSYGAEFVPSAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDN 790 KSK VF+GPS+ AETLFKYI+PEQVPVQYGGLS + +F+ D +E+ VKP +K TVEI + E+ LVWE+RV GW+VSY AEFVP + +YTV++ K RK+ P+DEPV+ +FK+ E GKV+LT+DN Sbjct: 341 KSKLVFAGPSRSAETLFKYISPEQVPVQYGGLSVDPCDCNPDFSLEDSASEITVKPGTKQTVEIIIYEKCELVWEIRVTGWEVSYKAEFVPEEKDAYTVVIQKPRKMRPSDEPVLTHSFKVNELGKVLLTVDN 473
BLAST of CN185807 vs. ExPASy Swiss-Prot
Match: PATL5_ARATH (Patellin-5 OS=Arabidopsis thaliana GN=PATL5 PE=1 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 3.818e-37 Identity = 75/133 (56.39%), Postives = 98/133 (73.68%), Query Frame = -3 Query: 401 KSKFVFSGPSKFAETLFKYIAPEQVPVQYGGLSREG---EQEFTTTDPVTEVVVKPASKYTVEIPVTERSILVWELRVLGWDVSYGAEFVPSAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDN 790 KSK VF+GPS+ AETL KYI+PE VPVQYGGLS + +FT D TE+ VKP +K TVEI V E+ +VWE+RV+GW+VSYGAEFVP + YTVI+ K RK+ +E V+ +FK+GE G+++LT+DN Sbjct: 516 KSKLVFAGPSRSAETLLKYISPEHVPVQYGGLSVDNCECNSDFTHDDIATEITVKPTTKQTVEIIVYEKCTIVWEIRVVGWEVSYGAEFVPENKEGYTVIIQKPRKMTAKNELVVSHSFKVGEVGRILLTVDN 648
BLAST of CN185807 vs. ExPASy Swiss-Prot
Match: PATL4_ARATH (Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 1.007e-29 Identity = 67/131 (51.15%), Postives = 91/131 (69.47%), Query Frame = -3 Query: 401 KSKFVFSGPSKFAETLFKYIAPEQVPVQYGGLSREGEQEFTTTDPVTEVVVKPASKYTVEIPVTE-RSILVWELRVLGWDVSYGAEFVPSAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDN 790 KSKFV + P+K ETL KYI +++PVQYGG + EF+ + V+EVVVKP S T+EIP E LVW++ VLGW+V+Y EFVP+ EG+YTVIV K +K+ + P I ++FK + GK+VLT+DN Sbjct: 392 KSKFVVARPAKVRETLLKYIPADELPVQYGGFKTVDDTEFSN-ETVSEVVVKPGSSETIEIPAPETEGTLVWDIAVLGWEVNYKEEFVPTEEGAYTVIVQKVKKMGANEGP-IRNSFKNSQAGKIVLTVDN 520
BLAST of CN185807 vs. ExPASy Swiss-Prot
Match: PATL6_ARATH (Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.755e-26 Identity = 58/131 (44.27%), Postives = 84/131 (64.12%), Query Frame = -3 Query: 401 KSKFVFSGPSKFAETLFKYIAPEQVPVQYGGLSREGEQEFTTTDPVTEVVVKPASKYTVEIPVTE-RSILVWELRVLGWDVSYGAEFVPSAEGSYTVIVSKTRKVAPTDEPVICDTFKIGEPGKVVLTIDN 790 KSKFV S AETL+K+I PE +PVQYGGLSR + + P +E +K K ++I E + + W++ V GWD+ Y AEFVP+AE SY ++V K +K+ TDE +C++F E GK++L++DN Sbjct: 258 KSKFVMSKEGNAAETLYKFIRPEDIPVQYGGLSRPTDSQNGPPKPASEFSIKGGEKVNIQIEGIEGGATITWDIVVGGWDLEYSAEFVPNAEESYAIVVEKPKKMKATDE-AVCNSFTTVEAGKLILSVDN 387 The following BLAST results are available for this feature:
BLAST of CN185807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185807 ID=CN185807; Name=CN185807; organism=Citrus sinensis; type=EST; length=798bpback to top |