CN185790
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: HAT22_ARATH (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana GN=HAT22 PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 1.014e-45 Identity = 89/127 (70.08%), Postives = 96/127 (75.59%), Query Frame = -1 Query: 328 KRQAWARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXQPLYMHMPAATLTMCPSCERIGGGIADGN--------SKGPFPMGTKPHCYSPFTNPSAAC 684 ++QA ARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRL QP YMHMPAATLTMCPSCER+GGG G+ +KG F + TKP Y+PFTNPSAAC Sbjct: 152 QKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKALKLSQPFYMHMPAATLTMCPSCERLGGGGVGGDTTAVDEETAKGAFSIVTKPRFYNPFTNPSAAC 278 HSP 2 Score: 26.9498 bits (58), Expect = 1.014e-45 Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = -3 Query: 665 KQHSTLNPKQKASLGK 712 K HSTLNPKQK +L + Sbjct: 143 KLHSTLNPKQKQALAR 158
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: HAT9_ARATH (Homeobox-leucine zipper protein HAT9 OS=Arabidopsis thaliana GN=HAT9 PE=2 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 1.292e-42 Identity = 86/136 (63.24%), Postives = 95/136 (69.85%), Query Frame = -1 Query: 328 KRQAWARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXQPLYMHMPAATLTMCPSCERIGGG----------------IADGN-SKGPFPMGTKPHCYSPFTNPSAAC 684 ++Q ARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETL DEN RL QP YMHMPA+TLT CPSCERIGGG I DG+ +KG F + +KPH ++PFTNPSAAC Sbjct: 139 QKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLADENIRLQKEIQELKTLKLTQPFYMHMPASTLTKCPSCERIGGGGGGNGGGGGGSGATAVIVDGSTAKGAFSISSKPHFFNPFTNPSAAC 274 HSP 2 Score: 26.5646 bits (57), Expect = 1.292e-42 Identity = 11/16 (68.75%), Postives = 12/16 (75.00%), Query Frame = -3 Query: 665 KQHSTLNPKQKASLGK 712 K HSTLNPKQK L + Sbjct: 130 KDHSTLNPKQKQVLAR 145
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSJ (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica GN=HOX27 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 6.411e-35 Identity = 68/118 (57.63%), Postives = 81/118 (68.64%), Query Frame = -1 Query: 331 KRQAWARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXQPLYMHMPAATLTMCPSCERIGGGIADGNSKGPFPMGTKPHCYSPFTNPSAA 684 ++ A A+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE+LK+CCETLT+ENRRLH +P YMH+PA TL+MCPSCER+ A ++ P SP P+AA Sbjct: 200 QKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELAELRALKTARPFYMHLPATTLSMCPSCERVASNPATASTSAP------AAATSPAAAPTAA 311 HSP 2 Score: 30.0314 bits (66), Expect = 6.411e-35 Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = -3 Query: 665 KQHSTLNPKQKASLGK 712 K+HSTLNPKQK +L K Sbjct: 191 KEHSTLNPKQKVALAK 206
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSI (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica GN=HOX27 PE=2 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 6.411e-35 Identity = 68/118 (57.63%), Postives = 81/118 (68.64%), Query Frame = -1 Query: 331 KRQAWARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXQPLYMHMPAATLTMCPSCERIGGGIADGNSKGPFPMGTKPHCYSPFTNPSAA 684 ++ A A+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE+LK+CCETLT+ENRRLH +P YMH+PA TL+MCPSCER+ A ++ P SP P+AA Sbjct: 200 QKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELAELRALKTARPFYMHLPATTLSMCPSCERVASNPATASTSAP------AAATSPAAAPTAA 311 HSP 2 Score: 30.0314 bits (66), Expect = 6.411e-35 Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = -3 Query: 665 KQHSTLNPKQKASLGK 712 K+HSTLNPKQK +L K Sbjct: 191 KEHSTLNPKQKVALAK 206
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSJ (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. japonica GN=HOX19 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 4.090e-34 Identity = 77/142 (54.23%), Postives = 88/142 (61.97%), Query Frame = -1 Query: 328 KRQAWARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLH----------------XXXXXXXXXXXXQPLYMHMPAATLTMCPSCERIGGG-------IADGNSKGPFPMGTKPHCYSPFTNPSAAC 684 ++ A A+QLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLK+CCETLT+ENRRL P YM +PAATLT+CPSCER+GG ADG GP T H ++PFT+ SAAC Sbjct: 153 QKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRALKFAPPPPSSAAHQPSPAPPAPFYMQLPAATLTICPSCERVGGPASAAKVVAADGTKAGP-GRTTTHHFFNPFTH-SAAC 292 HSP 2 Score: 28.8758 bits (63), Expect = 4.090e-34 Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = -3 Query: 665 KQHSTLNPKQKASLGK 712 ++HSTLNPKQK +L K Sbjct: 144 REHSTLNPKQKVALAK 159
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSI (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. indica GN=HOX19 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 4.090e-34 Identity = 77/142 (54.23%), Postives = 88/142 (61.97%), Query Frame = -1 Query: 328 KRQAWARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLH----------------XXXXXXXXXXXXQPLYMHMPAATLTMCPSCERIGGG-------IADGNSKGPFPMGTKPHCYSPFTNPSAAC 684 ++ A A+QLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLK+CCETLT+ENRRL P YM +PAATLT+CPSCER+GG ADG GP T H ++PFT+ SAAC Sbjct: 153 QKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRALKFAPPPPSSAAHQPSPAPPAPFYMQLPAATLTICPSCERVGGPASAAKVVAADGTKAGP-GRTTTHHFFNPFTH-SAAC 292 HSP 2 Score: 28.8758 bits (63), Expect = 4.090e-34 Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = -3 Query: 665 KQHSTLNPKQKASLGK 712 ++HSTLNPKQK +L K Sbjct: 144 REHSTLNPKQKVALAK 159
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSJ (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica GN=HOX11 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.375e-33 Identity = 65/118 (55.08%), Postives = 77/118 (65.25%), Query Frame = -1 Query: 331 KRQAWARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXQPLYMHMPAATLTMCPSCERIGGGIADGNSKGPFPMGTKPHCYSPFTNPSAA 684 ++ A A+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE+LK+CCETLT+ENRRL P YMH+PA TL+MCPSCER+ A + T +P + AA Sbjct: 203 QKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCERVASNSAPATASSAATSSTAAPPAAPSSGGIAA 320 HSP 2 Score: 29.6462 bits (65), Expect = 3.375e-33 Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = -3 Query: 665 KQHSTLNPKQKASLGK 712 K+HSTLNPKQK +L K Sbjct: 194 KEHSTLNPKQKLALAK 209
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSI (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica GN=HOX11 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.390e-33 Identity = 65/118 (55.08%), Postives = 77/118 (65.25%), Query Frame = -1 Query: 331 KRQAWARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXQPLYMHMPAATLTMCPSCERIGGGIADGNSKGPFPMGTKPHCYSPFTNPSAA 684 ++ A A+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE+LK+CCETLT+ENRRL P YMH+PA TL+MCPSCER+ A + T +P + AA Sbjct: 116 QKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCERVASNSAPATASSAATSSTAAPPAAPSSGGIAA 233 HSP 2 Score: 29.6462 bits (65), Expect = 3.390e-33 Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = -3 Query: 665 KQHSTLNPKQKASLGK 712 K+HSTLNPKQK +L K Sbjct: 107 KEHSTLNPKQKLALAK 122
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSJ (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. japonica GN=HOX15 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 3.029e-31 Identity = 71/129 (55.04%), Postives = 80/129 (62.02%), Query Frame = -1 Query: 328 KRQAWARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXQPLYMHM------PAATLTMCPSCERIGGGIADGNSKGPFP----MGTKPHCYSPFTNPSAAC 684 ++ A A+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE LK+CCETLT+ENRRLH M PAATL++CPSCER+ A G S T PH +SPF SAAC Sbjct: 120 QKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEENRRLHRELQQLRALTHSTAAGFFMATTLPVPAATLSICPSCERLATAAAAGASPTAAADRTNKPTAPHLFSPFAK-SAAC 247 HSP 2 Score: 30.0314 bits (66), Expect = 3.029e-31 Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = -3 Query: 665 KQHSTLNPKQKASLGK 712 K+HSTLNPKQK +L K Sbjct: 111 KEHSTLNPKQKVALAK 126
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSI (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. indica GN=HOX15 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.134e-30 Identity = 71/133 (53.38%), Postives = 81/133 (60.90%), Query Frame = -1 Query: 328 KRQAWARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXQPLYMHM------PAATLTMCPSCERIGGGIADGNSKGPFPMG--------TKPHCYSPFTNPSAAC 684 ++ A A+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE LK+CCETLT+ENRRLH M PAATL++CPSCER+ A + G P T PH +SPF SAAC Sbjct: 120 QKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEENRRLHRELQQLRALTHSTAAGFFMATTLPVPAATLSICPSCERLATAAA---AAGASPTAAADRTNKPTAPHLFSPFAK-SAAC 248 HSP 2 Score: 30.0314 bits (66), Expect = 1.134e-30 Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = -3 Query: 665 KQHSTLNPKQKASLGK 712 K+HSTLNPKQK +L K Sbjct: 111 KEHSTLNPKQKVALAK 126 The following BLAST results are available for this feature:
BLAST of CN185790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185790 ID=CN185790; Name=CN185790; organism=Citrus sinensis; type=EST; length=714bpback to top |