CN185607
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185607 vs. ExPASy Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2) HSP 1 Score: 373.629 bits (958), Expect = 6.875e-103 Identity = 174/217 (80.18%), Postives = 198/217 (91.24%), Query Frame = -1 Query: 144 EYHYQTLKSNVDMLKLIQLGLTFSDENGNLPTCGTD-KYCVWQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGELMMSSGIVLSDSMHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSSSLEKYAGVLYGLGVENGQNTH 791 EYHY+TLK+NV++LK+IQLGLTFSDE GNLPTCGTD KYC+WQFNFREFD+ DI+A DSIELL+QSGI+F KNNE GID+ RF EL+MSSGIVL++++HWVTFHSGYDFGYLLKLLTCQNLP+TQ FF +I +YFP VYDIKHLMKFCNSLHGGLNKLAELL+VERVGICHQAGSDSLLT+ TFRKL+ENFF S+EKY+GVLYGLGVENGQ H Sbjct: 59 EYHYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLTSCTFRKLQENFFIGSMEKYSGVLYGLGVENGQIVH 275
BLAST of CN185607 vs. ExPASy Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1) HSP 1 Score: 370.548 bits (950), Expect = 5.820e-102 Identity = 173/213 (81.22%), Postives = 195/213 (91.55%), Query Frame = -1 Query: 153 EYHYQTLKSNVDMLKLIQLGLTFSDENGNLPTCGTDKYCVWQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGELMMSSGIVLSDSMHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSSSLEKYAGVLYGLGVENGQ 791 +YHY+TLK+NV++LK+IQLGLTFS+E GNLPTCGTDKYC+WQFNFREFD++ DIFA DSIELLKQSGI+ KN GID+ RF EL+MSSGIVL++++HWVTFHSGYDFGYLLKLLTCQNLPD+Q +FF LI +YFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLT+ TFRKLKENFF L KY+GVLYGLGVENGQ Sbjct: 59 DYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTSCTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271
BLAST of CN185607 vs. ExPASy Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1) HSP 1 Score: 340.117 bits (871), Expect = 8.424e-93 Identity = 158/215 (73.49%), Postives = 186/215 (86.51%), Query Frame = -1 Query: 147 EYHYQTLKSNVDMLKLIQLGLTFSDENGNLPTCGTDKYCVWQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGELMMSSGIVLSDSMHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSSSLEKYAGVLYGLGVENGQNT 791 + +Y+TLK NVD+LKLIQ+GLTFSDENGNLPTCGTDK+C+WQFNFREF++ EDI+A++SIELL+Q GI+F KN E GID +RFGELMMSSGIVL+D++ WVTFH GYDFGYL+KLLTC+ LP Q +FF L+ +YFPTVYDIKHLM FCN L GGLN+LAEL+ VERVGICHQAGSDSLLT +FRKLKE +F S EKY GVLYGLGVE+G T Sbjct: 59 DLNYRTLKENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCGIDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRKLKERYFPGSTEKYTGVLYGLGVEDGTTT 273
BLAST of CN185607 vs. ExPASy Swiss-Prot
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=2 SV=1) HSP 1 Score: 294.278 bits (752), Expect = 5.301e-79 Identity = 140/208 (67.31%), Postives = 171/208 (82.21%), Query Frame = -1 Query: 171 YEYHYQTLKSNVDMLKLIQLGLTFSDENGNLPTCGTDKYCVWQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGELMMSSGIVLSDSMHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSSSLEKYAGVLYGL 794 YEY+Y TLK+NV+MLKLIQLGLT SDE GNLPTCGT+K C+WQFNFREF+V D+FA DSIELL++S I+ KNNE G+DA RF EL+M SG+VL+D +HWVTFH GYDFGYLLKLL+ + LP+ +FF+ + +FP VYDIK+LM FC +L+GGL K+AELL V+RVGI HQAGSDSLLT TF K+KE FF+ SL KY+G L+GL Sbjct: 68 YEYNYDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELLRKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPEEISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLRTFIKMKEFFFTGSLLKYSGFLFGL 275
BLAST of CN185607 vs. ExPASy Swiss-Prot
Match: CNOT7_DANRE (CCR4-NOT transcription complex subunit 7 OS=Danio rerio GN=cnot7 PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 2.024e-62 Identity = 121/232 (52.16%), Postives = 167/232 (71.98%), Query Frame = -1 Query: 120 EYHYQTLKSNVDMLKLIQLGLTFSDENGNLPTCGTDKYCVWQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGELMMSSGIVLSDSMHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSSSLE--KYAGVLYGLG-----VENGQ-NTH*KKGEKRE 791 +Y YQ L+ NVD+LK+IQLGLTF +E G P GT WQFNF+ F++ ED++A DSIELL SGI F K+ E GI+ M F EL+M+SG+VL + + W++FHSGYDFGYL+K+L+ LPD +V+FF ++R++FP +YD+K+LMK C +L GGL ++AE LE+ER+G HQAGSDSLLT F K++E FF ++ KY G LYGLG V+NG N + ++ K++ Sbjct: 59 DYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETMYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSKLPDEEVDFFEILRLFFPIIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGSGSSYVQNGTGNAYEEEANKQQ 285
BLAST of CN185607 vs. ExPASy Swiss-Prot
Match: CNOT7_MOUSE (CCR4-NOT transcription complex subunit 7 OS=Mus musculus GN=Cnot7 PE=1 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 4.508e-62 Identity = 118/219 (53.88%), Postives = 160/219 (73.06%), Query Frame = -1 Query: 156 EYHYQTLKSNVDMLKLIQLGLTFSDENGNLPTCGTDKYCVWQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGELMMSSGIVLSDSMHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSSSLE--KYAGVLYGLG-----VENG 791 +Y YQ L+ NVD+LK+IQLGLTF +E G P GT WQFNF+ F++ ED++A DSIELL SGI F K+ E GI+ F EL+M+SG+VL + + W++FHSGYDFGYL+K+LT NLP+ +++FF ++R++FP +YD+K+LMK C +L GGL ++AE LE+ER+G HQAGSDSLLT F K++E FF ++ KY G LYGLG V+NG Sbjct: 59 DYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGSGSSYVQNG 272
BLAST of CN185607 vs. ExPASy Swiss-Prot
Match: CNOT7_HUMAN (CCR4-NOT transcription complex subunit 7 OS=Homo sapiens GN=CNOT7 PE=1 SV=3) HSP 1 Score: 238.039 bits (606), Expect = 4.508e-62 Identity = 118/219 (53.88%), Postives = 160/219 (73.06%), Query Frame = -1 Query: 156 EYHYQTLKSNVDMLKLIQLGLTFSDENGNLPTCGTDKYCVWQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGELMMSSGIVLSDSMHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSSSLE--KYAGVLYGLG-----VENG 791 +Y YQ L+ NVD+LK+IQLGLTF +E G P GT WQFNF+ F++ ED++A DSIELL SGI F K+ E GI+ F EL+M+SG+VL + + W++FHSGYDFGYL+K+LT NLP+ +++FF ++R++FP +YD+K+LMK C +L GGL ++AE LE+ER+G HQAGSDSLLT F K++E FF ++ KY G LYGLG V+NG Sbjct: 59 DYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGSGSSYVQNG 272
BLAST of CN185607 vs. ExPASy Swiss-Prot
Match: CNOT7_CHICK (CCR4-NOT transcription complex subunit 7 OS=Gallus gallus GN=CNOT7 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 4.508e-62 Identity = 118/219 (53.88%), Postives = 160/219 (73.06%), Query Frame = -1 Query: 156 EYHYQTLKSNVDMLKLIQLGLTFSDENGNLPTCGTDKYCVWQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGELMMSSGIVLSDSMHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSSSLE--KYAGVLYGLG-----VENG 791 +Y YQ L+ NVD+LK+IQLGLTF +E G P GT WQFNF+ F++ ED++A DSIELL SGI F K+ E GI+ F EL+M+SG+VL + + W++FHSGYDFGYL+K+LT NLP+ +++FF ++R++FP +YD+K+LMK C +L GGL ++AE LE+ER+G HQAGSDSLLT F K++E FF ++ KY G LYGLG V+NG Sbjct: 59 DYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGSGSSYVQNG 272
BLAST of CN185607 vs. ExPASy Swiss-Prot
Match: CNOT7_BOVIN (CCR4-NOT transcription complex subunit 7 OS=Bos taurus GN=CNOT7 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 4.508e-62 Identity = 118/219 (53.88%), Postives = 160/219 (73.06%), Query Frame = -1 Query: 156 EYHYQTLKSNVDMLKLIQLGLTFSDENGNLPTCGTDKYCVWQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGELMMSSGIVLSDSMHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSSSLE--KYAGVLYGLG-----VENG 791 +Y YQ L+ NVD+LK+IQLGLTF +E G P GT WQFNF+ F++ ED++A DSIELL SGI F K+ E GI+ F EL+M+SG+VL + + W++FHSGYDFGYL+K+LT NLP+ +++FF ++R++FP +YD+K+LMK C +L GGL ++AE LE+ER+G HQAGSDSLLT F K++E FF ++ KY G LYGLG V+NG Sbjct: 59 DYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGSGSSYVQNG 272
BLAST of CN185607 vs. ExPASy Swiss-Prot
Match: CNOT7_XENLA (CCR4-NOT transcription complex subunit 7 OS=Xenopus laevis GN=cnot7 PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.004e-61 Identity = 118/219 (53.88%), Postives = 158/219 (72.15%), Query Frame = -1 Query: 156 EYHYQTLKSNVDMLKLIQLGLTFSDENGNLPTCGTDKYCVWQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGELMMSSGIVLSDSMHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSSSLE--KYAGVLYGLG-----VENG 791 +Y YQ L+ NVD+LK+IQLGLTF +E G P GT WQFNF+ F++ ED++A DSIELL SGI F K+ E GI+ F EL M+SG+VL + + W++FHSGYDFGYL+K+LT NLP+ + +FF ++R++FP +YD+K+LMK C +L GGL ++AE LE+ER+G HQAGSDSLLT F K++E FF ++ KY G LYGLG V+NG Sbjct: 59 DYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEVEQDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGSGSSYVQNG 272 The following BLAST results are available for this feature:
BLAST of CN185607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185607 ID=CN185607; Name=CN185607; organism=Citrus sinensis; type=EST; length=800bpback to top |