CN185319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185319 vs. ExPASy Swiss-Prot
Match: BH004_ARATH (Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 9.757e-47 Identity = 97/148 (65.54%), Postives = 119/148 (80.41%), Query Frame = -3 Query: 288 KASLLGDAISYINELRTKLQSAESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMEALKELDLEVNHASMSVVNDLMIQQATVKMGSRFYTQEQLKNVLAAKVGD 731 KASLLGDAISYI+EL++KLQ AESDKE+LQK++ + KE AG K S +Q+ +S LI+++++VKIIGWDAMIRIQ SK+NHP AK MEALKELDLEVNHAS+SVVNDLMIQQATVKMG++F+TQ+QLK L KVG+ Sbjct: 447 KASLLGDAISYISELKSKLQKAESDKEELQKQIDVMNKE-AGNAKSSVKDRKCLNQE------SSVLIEMEVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATVKMGNQFFTQDQLKVALTEKVGE 587 HSP 2 Score: 25.7942 bits (55), Expect = 9.757e-47 Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = -2 Query: 727 AVVPNVSKMDKS 762 AVVPNVSKMDK+ Sbjct: 437 AVVPNVSKMDKA 448
BLAST of CN185319 vs. ExPASy Swiss-Prot
Match: ATR2_ARATH (Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 2.539e-44 Identity = 89/148 (60.14%), Postives = 111/148 (75.00%), Query Frame = -3 Query: 288 KASLLGDAISYINELRTKLQSAESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMEALKELDLEVNHASMSVVNDLMIQQATVKMGSRFYTQEQLKNVLAAKVGD 731 KASLLGDAISYINEL++KLQ AESDKE++QK+L + KE G G ++ + + I+++I+VKIIGWD MIR+Q KK+HP A+ MEALKELDLEVNHAS+SVVNDLMIQQATVKMGS+F+ +QLK L KVG+ Sbjct: 446 KASLLGDAISYINELKSKLQQAESDKEEIQKKLDGMSKE---GNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQQATVKMGSQFFNHDQLKVALMTKVGE 590 HSP 2 Score: 25.7942 bits (55), Expect = 2.539e-44 Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = -2 Query: 727 AVVPNVSKMDKS 762 AVVPNVSKMDK+ Sbjct: 436 AVVPNVSKMDKA 447
BLAST of CN185319 vs. ExPASy Swiss-Prot
Match: RAP1_ARATH (Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 7.927e-43 Identity = 89/147 (60.54%), Postives = 112/147 (76.19%), Query Frame = -3 Query: 291 KASLLGDAISYINELRTKLQSAESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMEALKELDLEVNHASMSVVNDLMIQQATVKMGSRFYTQEQLKNVLAAKVG 731 KASLLGDAI+YINEL++K+ ES+K ++ +L VK ELAG + G D+ S + K + ++IEVKIIGWDAMIR++SSK+NHPAA+LM AL +L+LEVNHASMSVVNDLMIQQATVKMG R YTQEQL+ L +K+G Sbjct: 483 KASLLGDAIAYINELKSKVVKTESEKLQIKNQLEEVKLELAGRKASASGG------DMSSSCSSIKPVGMEIEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATVKMGFRIYTQEQLRASLISKIG 623 HSP 2 Score: 25.7942 bits (55), Expect = 7.927e-43 Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = -2 Query: 727 AVVPNVSKMDKS 762 AVVPNVSKMDK+ Sbjct: 473 AVVPNVSKMDKA 484
BLAST of CN185319 vs. ExPASy Swiss-Prot
Match: BH028_ARATH (Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.124e-27 Identity = 69/147 (46.94%), Postives = 100/147 (68.03%), Query Frame = -3 Query: 294 KASLLGDAISYINELRTKLQSAESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKLIDLDIEVKII-GWDAMIRIQSSKKNHPAAKLMEALKELDLEVNHASMSVVNDLMIQQATVKMGSRFYTQEQLKNVLAAKV 731 K SLL DA+ YINEL++K ++ E +K ++ + +K E+AG ++ PS + K S + IEVKI+ DAM+R++S K +HP A+LM AL +L+LEVNHAS+SV+NDLMIQQA VKMG R Y QE+L+++L +K+ Sbjct: 374 KTSLLEDAVCYINELKSKAENVELEKHAIEIQFNELK-EIAG---QRNAIPSVCKYEEKASEM------MKIEVKIMESDDAMVRVESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQQANVKMGLRIYKQEELRDLLMSKI 510 HSP 2 Score: 25.7942 bits (55), Expect = 1.124e-27 Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = -2 Query: 727 AVVPNVSKMDKS 762 AVVPNVSKMDK+ Sbjct: 364 AVVPNVSKMDKT 375
BLAST of CN185319 vs. ExPASy Swiss-Prot
Match: BH014_ARATH (Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 9.912e-18 Identity = 51/148 (34.46%), Postives = 85/148 (57.43%), Query Frame = -3 Query: 306 RWTKASLLGDAISYINELRTKLQSAESDKEDLQKELASVKKELAGGGKDSHSGPSTSDQDLKMSNHASKL---IDLDIEVKIIGWDAMIRIQSSKKNHPAAKLMEALKELDLEVNHASMSVVNDLMIQQATVKMGSRFYTQEQLKNVL 740 R KASLL DA+SYI L++K+ +DL+ E+ +K +S S S S + +++ SK DL+++VKI+G +A+IR+Q+ NHP + LM AL E+D V HA+ S ++ +M+Q V + ++++L+ L Sbjct: 277 RMDKASLLSDAVSYIESLKSKI-------DDLETEIKKMKMTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGSDLEVQVKIVGEEAIIRVQTENVNHPTSALMSALMEMDCRVQHANASRLSQVMVQDVVVLVPEGLRSEDRLRTTL 417 HSP 2 Score: 21.9422 bits (45), Expect = 9.912e-18 Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = -2 Query: 727 AVVPNVSKMDKS 762 A+VP VS+MDK+ Sbjct: 270 AIVPKVSRMDKA 281 The following BLAST results are available for this feature:
BLAST of CN185319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185319 ID=CN185319; Name=CN185319; organism=Citrus sinensis; type=EST; length=763bpback to top |