DC887599
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887599 vs. ExPASy Swiss-Prot
Match: IDI2_ARATH (Isopentenyl-diphosphate Delta-isomerase II OS=Arabidopsis thaliana GN=IPP2 PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.720e-60 Identity = 94/106 (88.68%), Postives = 100/106 (94.34%), Query Frame = -3 Query: 271 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 588 DEFTPLGR+LYKAPSDGKWGEHELDYLLFIVRDV V PNPDEVAE KYV+RE+LKEL++KADAGEEGLKLSPWFRLVVDNFL KWWDH+EKGTL E IDMKTIHKL Sbjct: 179 DEFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVKVQPNPDEVAEIKYVSREELKELVKKADAGEEGLKLSPWFRLVVDNFLMKWWDHVEKGTLVEAIDMKTIHKL 284 HSP 2 Score: 49.6766 bits (117), Expect = 1.720e-60 Identity = 24/27 (88.89%), Postives = 26/27 (96.30%), Query Frame = -2 Query: 599 LIEENALGVRNAAQRKLLDELGICAED 679 LI++NALGVRNAAQRKLLDELGI AED Sbjct: 149 LIQDNALGVRNAAQRKLLDELGIVAED 175
BLAST of DC887599 vs. ExPASy Swiss-Prot
Match: IDI1_CAMAC (Isopentenyl-diphosphate Delta-isomerase I OS=Camptotheca acuminata GN=IPI1 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 2.929e-60 Identity = 93/106 (87.74%), Postives = 101/106 (95.28%), Query Frame = -3 Query: 271 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 588 D+F PLGRILYKAPSDGKWGEHELDYLLFIVRDV+VNPNPDEVA+ KYV R+QLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDH+EKGT++E DMK+IHKL Sbjct: 129 DQFIPLGRILYKAPSDGKWGEHELDYLLFIVRDVNVNPNPDEVADIKYVTRDQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVEKGTMHEAADMKSIHKL 234 HSP 2 Score: 48.1358 bits (113), Expect = 2.929e-60 Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = -2 Query: 599 LIEENALGVRNAAQRKLLDELGICAED 679 LI+ENALG RNAAQRKLLDELGI AED Sbjct: 99 LIKENALGARNAAQRKLLDELGIPAED 125
BLAST of DC887599 vs. ExPASy Swiss-Prot
Match: IDI2_CLABR (Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia breweri GN=IPI2 PE=3 SV=2) HSP 1 Score: 203.756 bits (517), Expect = 3.812e-60 Identity = 94/106 (88.68%), Postives = 102/106 (96.23%), Query Frame = -3 Query: 271 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 588 DEFTPL R+LYKAPSDGKWGEHELDYLLFIVRDV+V+PNPDEVAE KYVNREQLKELL+KADAGEEGLKLSPWFRLVVDNFL KWWDH+EKGTL+E +DMK+IHKL Sbjct: 181 DEFTPLSRMLYKAPSDGKWGEHELDYLLFIVRDVAVHPNPDEVAEIKYVNREQLKELLKKADAGEEGLKLSPWFRLVVDNFLPKWWDHVEKGTLSEAVDMKSIHKL 286 HSP 2 Score: 47.7506 bits (112), Expect = 3.812e-60 Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = -2 Query: 599 LIEENALGVRNAAQRKLLDELGICAED 679 LI+EN LGVRNAAQRKLLDELGI AED Sbjct: 151 LIDENNLGVRNAAQRKLLDELGIPAED 177
BLAST of DC887599 vs. ExPASy Swiss-Prot
Match: IDI2_CAMAC (Isopentenyl-diphosphate Delta-isomerase II OS=Camptotheca acuminata GN=IPI2 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.871e-59 Identity = 89/107 (83.18%), Postives = 101/107 (94.39%), Query Frame = -3 Query: 268 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKLT 588 D+F PLGR+LYKAPSDGKWGEHELDYLLFI+RDV+V+PNPDEVA+ KYVN++QLK+LLRK DAGEEGLKLSPWFRLVV+NFLFKWWDH+EKGTL + DMKTIHKLT Sbjct: 203 DQFIPLGRMLYKAPSDGKWGEHELDYLLFIIRDVNVHPNPDEVADVKYVNQDQLKDLLRKVDAGEEGLKLSPWFRLVVENFLFKWWDHVEKGTLQDATDMKTIHKLT 309 HSP 2 Score: 49.6766 bits (117), Expect = 1.871e-59 Identity = 24/27 (88.89%), Postives = 26/27 (96.30%), Query Frame = -2 Query: 599 LIEENALGVRNAAQRKLLDELGICAED 679 L++ENALGVRNAAQRKLLDELGI AED Sbjct: 173 LVDENALGVRNAAQRKLLDELGIPAED 199
BLAST of DC887599 vs. ExPASy Swiss-Prot
Match: IDI2_CLAXA (Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia xantiana GN=IPI2 PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 1.872e-59 Identity = 92/106 (86.79%), Postives = 100/106 (94.34%), Query Frame = -3 Query: 271 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 588 DEFTP+ R+LYKAPSDGKWGEHELDYLLFIVRDV ++PNPDEVA+ KYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL KWWDH+EKGTL+E +DMKTIH L Sbjct: 185 DEFTPVSRMLYKAPSDGKWGEHELDYLLFIVRDVGIHPNPDEVADIKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLPKWWDHVEKGTLSEAVDMKTIHNL 290 HSP 2 Score: 47.7506 bits (112), Expect = 1.872e-59 Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = -2 Query: 599 LIEENALGVRNAAQRKLLDELGICAED 679 LI+EN LGVRNAAQRKLLDELGI AED Sbjct: 155 LIDENNLGVRNAAQRKLLDELGIPAED 181
BLAST of DC887599 vs. ExPASy Swiss-Prot
Match: IDI1_ARATH (Isopentenyl-diphosphate Delta-isomerase I OS=Arabidopsis thaliana GN=IPP1 PE=2 SV=2) HSP 1 Score: 194.512 bits (493), Expect = 1.003e-57 Identity = 87/106 (82.08%), Postives = 98/106 (92.45%), Query Frame = -3 Query: 271 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 588 DEFTPLGR+LYKAPSDGKWGEHE+DYLLFIVRDV + PNPDEVAE KYV+RE+LKEL++KADAG+E +KLSPWFRLVVDNFL KWWDH+EKGT+ E DMKTIHKL Sbjct: 128 DEFTPLGRMLYKAPSDGKWGEHEVDYLLFIVRDVKLQPNPDEVAEIKYVSREELKELVKKADAGDEAVKLSPWFRLVVDNFLMKWWDHVEKGTITEAADMKTIHKL 233 HSP 2 Score: 48.9062 bits (115), Expect = 1.003e-57 Identity = 24/27 (88.89%), Postives = 24/27 (88.89%), Query Frame = -2 Query: 599 LIEENALGVRNAAQRKLLDELGICAED 679 LIEEN LGVRNAAQRKL DELGI AED Sbjct: 98 LIEENVLGVRNAAQRKLFDELGIVAED 124
BLAST of DC887599 vs. ExPASy Swiss-Prot
Match: IDI1_CLABR (Isopentenyl-diphosphate Delta-isomerase I OS=Clarkia breweri GN=IPI1 PE=2 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 2.893e-57 Identity = 87/106 (82.08%), Postives = 98/106 (92.45%), Query Frame = -3 Query: 271 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 588 D+F PL RILYKAPSDGKWGEHELDYLLFI+RDV+++PNPDEVAE KY+NR+ LKELLRKADA EEG+KLSPWFRLVVDNFLFKWWDH+EKG+L + DMKTIHKL Sbjct: 182 DQFIPLSRILYKAPSDGKWGEHELDYLLFIIRDVNLDPNPDEVAEVKYMNRDDLKELLRKADAEEEGVKLSPWFRLVVDNFLFKWWDHVEKGSLKDAADMKTIHKL 287 HSP 2 Score: 48.521 bits (114), Expect = 2.893e-57 Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = -2 Query: 599 LIEENALGVRNAAQRKLLDELGICAED 679 LI+EN LGVRNAAQRKLLDELGI AED Sbjct: 152 LIDENCLGVRNAAQRKLLDELGIPAED 178
BLAST of DC887599 vs. ExPASy Swiss-Prot
Match: IDI1_MESAU (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mesocricetus auratus GN=IDI1 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.272e-31 Identity = 55/106 (51.89%), Postives = 84/106 (79.25%), Query Frame = -3 Query: 271 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 588 +E L RI YKA SDG WGEHE+DY+LF+ ++V++NP+P+E+ Y YV++E+LKEL++KA +GE +KL+PWF+++VD FLFKWWD+L L++ +D + IH++ Sbjct: 126 NEMHYLTRIYYKAQSDGIWGEHEIDYILFLKKNVTLNPDPNEIKSYCYVSKEELKELVKKAASGE--VKLTPWFKIIVDTFLFKWWDNLNH--LSQFVDHEKIHRM 227 HSP 2 Score: 31.187 bits (69), Expect = 1.272e-31 Identity = 16/34 (47.06%), Postives = 22/34 (64.71%), Query Frame = -2 Query: 578 LIEENALGVRNAAQRKLLDELGICAEDXXXXXVH 679 L E +A+GV+ AAQR+L ELGI E+ +H Sbjct: 96 LEENDAIGVKRAAQRRLKAELGIPLEEVDPNEMH 129
BLAST of DC887599 vs. ExPASy Swiss-Prot
Match: IDI1_MACFA (Isopentenyl-diphosphate Delta-isomerase 1 OS=Macaca fascicularis GN=IDI1 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 4.764e-31 Identity = 53/106 (50.00%), Postives = 82/106 (77.36%), Query Frame = -3 Query: 271 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 588 +E L RI YKA SDG WGEHE+DY+LF+ ++V++NP+P+E+ + YV++E+LKELL+KA GE +K++PWF+++ + FLFKWWD+L LN+ +D + IH++ Sbjct: 126 EEINYLTRIHYKAQSDGIWGEHEIDYILFVRKNVTLNPDPNEIKSFCYVSKEELKELLKKAANGE--IKITPWFQIIAETFLFKWWDNLNH--LNQFVDHEKIHRM 227 HSP 2 Score: 32.3426 bits (72), Expect = 4.764e-31 Identity = 17/27 (62.96%), Postives = 20/27 (74.07%), Query Frame = -2 Query: 599 LIEENALGVRNAAQRKLLDELGICAED 679 L E +ALGVR AAQR+L ELGI E+ Sbjct: 96 LEENDALGVRRAAQRRLKAELGIPLEE 122
BLAST of DC887599 vs. ExPASy Swiss-Prot
Match: IDI1_MOUSE (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mus musculus GN=Idi1 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.370e-30 Identity = 54/112 (48.21%), Postives = 84/112 (75.00%), Query Frame = -3 Query: 271 LKMCQFDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 606 L+ +E L RI YKA SDG WGEHE+DY+LF+ ++V++NP+P+E+ Y YV++E+++E+L+KA +GE +KL+PWF+++ D FLFKWWD+L L+ +D + IH+L Sbjct: 120 LEEVDLNEMDYLTRIYYKAQSDGIWGEHEVDYILFLRKNVTLNPDPNEIKSYCYVSKEEVREILKKAASGE--IKLTPWFKIIADTFLFKWWDNLNH--LSPFVDHEKIHRL 227 HSP 2 Score: 30.8018 bits (68), Expect = 1.370e-30 Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = -2 Query: 599 LIEENALGVRNAAQRKLLDELGICAED 679 L E NA+GV+ AA+R+L ELGI E+ Sbjct: 96 LEENNAIGVKRAAKRRLKAELGIPLEE 122 The following BLAST results are available for this feature:
BLAST of DC887599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887599 ID=DC887599; Name=DC887599; organism=Citrus sinensis; type=EST; length=680bpback to top |