DC887588
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: SKP1B_ARATH (SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 2.809e-43 Identity = 89/131 (67.94%), Postives = 97/131 (74.05%), Query Frame = -2 Query: 217 NGIPLPNVTGKILAKVVEYCKKHVEVPA---TQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 600 NGIPLPNVT KIL+KV+EYCK+HVE T +EDLK+WD++F+KVDQ TLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP ENQWAFE Sbjct: 41 NGIPLPNVTSKILSKVIEYCKRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: SKP1A_ARATH (SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.394e-42 Identity = 86/128 (67.19%), Postives = 97/128 (75.78%), Query Frame = -2 Query: 217 NGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 600 NG+PLPNVT KILAKV+EYCK+HVE A++ ++DLK+WD DF+K+DQATLF+LILAANYLNIK LLDLTCQTVADMIKGKTPEEIR TFNIKNDFTP ENQWAFE Sbjct: 40 NGVPLPNVTSKILAKVIEYCKRHVEAAASK-------AEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: ASK4_ARATH (SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.929e-37 Identity = 78/128 (60.94%), Postives = 91/128 (71.09%), Query Frame = -2 Query: 217 NGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 600 NGIPLPNVTG ILAKV+EYCKKHVE A ++LK+WD++FVKVDQ TLFDLILAANYLNI GLLDLTC+ VAD ++GKTPE++R FNIKND+TP EN+WAFE Sbjct: 42 NGIPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSAE------NDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: ASK3_ARATH (SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.651e-35 Identity = 75/128 (58.59%), Postives = 87/128 (67.97%), Query Frame = -2 Query: 217 NGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 600 NGIPLPNVTG ILAKV+EYCKKHVE A +LK+WD DFVKVD TLFDL+ AANYLNI GLLDLTC+ VAD ++GKTP ++R+ FNIKND+TP EN+WAFE Sbjct: 42 NGIPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSTE------NHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: ASK11_ARATH (SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.273e-35 Identity = 77/128 (60.16%), Postives = 87/128 (67.97%), Query Frame = -2 Query: 217 NGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 600 +GIPL NV KIL KV+EYCKKH A EEDL +WD F+ ++Q+T+F+LILAANYLNIK LLDLTCQTVADMIKGKTPEEIR TFNI+NDFTP ENQWAFE Sbjct: 40 DGIPLANVESKILVKVIEYCKKHHVDEANP---------------ISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: ASK12_ARATH (SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.058e-34 Identity = 76/129 (58.91%), Postives = 86/129 (66.67%), Query Frame = -2 Query: 217 NGIPLPNVTGKILAKVVEYCKK-HVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 600 +GIPL NV KIL KV+EYCKK HV+ EEDL WD F+ ++Q+T+F+LILAANYLNIK L DLTCQTVADMIKGKTPEEIR TFNI+NDFTP ENQWAFE Sbjct: 40 DGIPLANVESKILVKVIEYCKKYHVD----------------EANPISEEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: ASK9_ARATH (SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 6.492e-32 Identity = 71/128 (55.47%), Postives = 85/128 (66.41%), Query Frame = -2 Query: 217 NGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 600 NGIPLPNVTGKILA V+EYC KH V A ++DLK WD +F++ D +T+FDLI AANYLNIK L DL CQTVA++IKG TPE+IR+ FNI+ND TP EN+WAFE Sbjct: 41 NGIPLPNVTGKILAMVIEYCNKH-HVDAANPCS--------------DDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVAEIIKGNTPEQIREFFNIENDLTPEEEAAIRRENKWAFE 153
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: SKP1_XENLA (S-phase kinase-associated protein 1 OS=Xenopus laevis GN=skp1 PE=1 SV=3) HSP 1 Score: 132.88 bits (333), Expect = 1.224e-30 Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = -2 Query: 217 IPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 594 +PLPNV IL KV+++C H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT ENQW E Sbjct: 45 VPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: SKP1_RAT (S-phase kinase-associated protein 1 OS=Rattus norvegicus GN=Skp1 PE=2 SV=3) HSP 1 Score: 132.88 bits (333), Expect = 1.224e-30 Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = -2 Query: 217 IPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 594 +PLPNV IL KV+++C H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT ENQW E Sbjct: 45 VPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: SKP1_PONAB (S-phase kinase-associated protein 1 OS=Pongo abelii GN=SKP1 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.224e-30 Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = -2 Query: 217 IPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 594 +PLPNV IL KV+++C H + P + +D+ WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT ENQW E Sbjct: 45 VPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT--------DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162 The following BLAST results are available for this feature:
BLAST of DC887588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887588 ID=DC887588; Name=DC887588; organism=Citrus sinensis; type=EST; length=601bpback to top |