DC887468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887468 vs. ExPASy Swiss-Prot
Match: PUB33_ARATH (U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 4.636e-41 Identity = 82/166 (49.40%), Postives = 109/166 (65.66%), Query Frame = -3 Query: 148 SFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVA------------EERPVPSFFLCPILQEIMHDPQVAADGFTYEGKAIRDWLENGRETSPMTNLRLSHLHLTPNHALRHAIQDWL 609 SFG+I+L+LLTGR + ++ EV+ A+ G L+ +LDPLAGDWP A +L L L+CCE RPD+ + + LE + + E R P +F+CPI QE+M DP VAADGFTYE +AIR WL++ +TSPMTN++LSH L NHALR AIQ+WL Sbjct: 665 SFGIILLRLLTGRPALRISNEVKYALDNGTLNDLLDPLAGDWPFVQAEQLARLALRCCETVSENRPDLGTEVWRVLEPMRASSGGSSSFHLGRNEHRIAPPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHALRSAIQEWL 830
BLAST of DC887468 vs. ExPASy Swiss-Prot
Match: PUB32_ARATH (U-box domain-containing protein 32 OS=Arabidopsis thaliana GN=PUB32 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.887e-34 Identity = 75/166 (45.18%), Postives = 103/166 (62.05%), Query Frame = -3 Query: 151 SFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL----------VKELEQLHVAEE---RPVPSFFLCPILQEIMHDPQVAADGFTYEGKAIRDWLENGRETSPMTNLRLSHLHLTPNHALRHAIQDW 609 +FG+I+LQLLT R G+ +V+ A+ +S++LD AGDWP ++L ++ ++CC+ RPD+ L V E A + R PS +LCPI QE+M DP +AADGFTYE +AIR+WL NG +TSPMTNL++ +L PNHAL AIQDW Sbjct: 636 AFGIILLQLLTRRPVSGILRDVKCALENDNISAVLDNSAGDWPVARGKKLANVAIRCCKKNPMNRPDLAVVLRFIDRMKAPEVPSSETSSYANQNVPRRPPSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALHLAIQDW 801
BLAST of DC887468 vs. ExPASy Swiss-Prot
Match: PUB34_ARATH (U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 7.927e-33 Identity = 74/162 (45.68%), Postives = 95/162 (58.64%), Query Frame = -3 Query: 151 SFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERPV---------PSFFLCPILQEIMHDPQVAADGFTYEGKAIRDWLENGRETSPMTNLRLSHLHLTPNHALRHAIQDW 609 +FG+IILQLLT R P G+ V AV G L+ +LD DWP L +GL+C E R+RPD+ ++ L++L V PS + CPIL+EIM +P++AADGFTYE KAI WLE SP+T +L H LTPNH LR AI+DW Sbjct: 630 AFGIIILQLLTARNPSGIVPAVENAVKKGTLTEMLDKSVTDWPLAETEELARIGLKCAEFRCRDRPDLKSEVIPVLKRLVETANSKVKKEGSNLRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWLEK-HNISPVTRQKLDHFKLTPNHTLRSAIRDW 790
BLAST of DC887468 vs. ExPASy Swiss-Prot
Match: PUB51_ARATH (U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51 PE=2 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 4.071e-29 Identity = 66/169 (39.05%), Postives = 102/169 (60.36%), Query Frame = -3 Query: 151 SFGLIILQLLTGRLPVGLAGEVRRAV--SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH--------------VAEERPVPSFFLCPILQEIMHDPQVAADGFTYEGKAIRDWLENGRETSPMTNLRLSHLHLTPNHALRHAIQDW 609 +FG+I+LQL+T R +GLA + +A+ GK + ILD AGDWP A+ +V +GL+C E+ R+RPD+ ++ LE+L + P+ F CPI +++M +P VA+DG+TYE +AI++WL+ + SPMT+L L PNH+L AI++W Sbjct: 623 AFGIILLQLVTARSAMGLAHSIEKALRDQTGKFTEILDKTAGDWPVKEAKEMVMIGLRCAEMRKRDRPDLGKEILPVLERLKEVASIARNMFADNLIDHHHNAPTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQKNHK-SPMTDLPFPSDSLLPNHSLLSAIKEW 790
BLAST of DC887468 vs. ExPASy Swiss-Prot
Match: PUB53_ARATH (Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana GN=PUB53 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.944e-29 Identity = 69/166 (41.57%), Postives = 100/166 (60.24%), Query Frame = -3 Query: 151 SFGLIILQLLTGRLPVGLAGEVRRAVSCG---KLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERP----------VPSFFLCPILQEIMHDPQVAADGFTYEGKAIRDWLENGRETSPMTNLRLSHLHLTPNHALRHAIQDW 609 +FG+IILQLLTG+ + L V A+ +L ILD AG+WP R+L L LQC EL ++RPD+ ++ LE L ++ PS F CP+L+++M +P +AADG+TY+ +AI +W+EN R TSP+TN L +++L PNH L AI +W Sbjct: 650 AFGMIILQLLTGQQAMALTYTVETAMENNNDDELIQILDEKAGNWPIEETRQLAALALQCTELRSKDRPDLEDQILPVLESLKKVADKARNSLSAAPSQPPSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWMENHR-TSPVTNSPLQNVNLLPNHTLYAAIVEW 814
BLAST of DC887468 vs. ExPASy Swiss-Prot
Match: PUB50_ARATH (Putative U-box domain-containing protein 50 OS=Arabidopsis thaliana GN=PUB50 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.470e-26 Identity = 71/180 (39.44%), Postives = 100/180 (55.56%), Query Frame = -3 Query: 142 SFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSI--LDPLAGDWPTFVARRLVDLGLQCCELYGRERPDI-TPSLVKELEQLHV---------------------AEERPVPSFFLCPILQEIMHDPQVAADGFTYEGKAIRDWLENGRETSPMTNLRLSHLHLTPNHALRHAIQDWLCK 609 +FG+++L LLTGR GL +A+S + S + LD AG WP +A+ L ++C + D T +++EL ++ + +PS F+CPILQE+M +P VAADGF+YE +AI++WL G +TSPMTNLRL + LTPNH LR IQDW K Sbjct: 583 AFGVLLLHLLTGRNWHGLL----KAMSMNQTSILRDLDQTAGKWPLELAKEFGALAVKCSSVNRGGNMDFSTKEIMEELGKIREKADEFKTKGGYEEATNSNMDEGDPNDIPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDTSPMTNLRLDYQMLTPNHTLRSLIQDWHSK 758
BLAST of DC887468 vs. ExPASy Swiss-Prot
Match: PUB35_ARATH (U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 5.502e-26 Identity = 67/164 (40.85%), Postives = 95/164 (57.93%), Query Frame = -3 Query: 151 SFGLIILQLLTGRLPVGLAGEVRRAV-SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERPVPSF----------FLCPILQEIMHDPQVAADGFTYEGKAIRDWLENGRETSPMTNLRLSHLHLTPNHALRHAIQDW 609 SFG+I+LQLLT + + L V A+ S + ILD AG+WP R L L L C EL G++RPD+ ++ LE L E+ SF F+CP+L+++M++P VAADG+TY+ AI +WL+ TSPMT+ L +L PN+ L AI +W Sbjct: 669 SFGMILLQLLTAKPAIALTHFVESAMDSNDEFLKILDQKAGNWPIEETRELAALALCCTELRGKDRPDLKDQILPALENLKKVAEKARNSFSGVSTQPPTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKE-HNTSPMTDSPLHSKNLLPNYTLYTAIMEW 831
BLAST of DC887468 vs. ExPASy Swiss-Prot
Match: PUB52_ARATH (U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.385e-26 Identity = 62/164 (37.80%), Postives = 96/164 (58.54%), Query Frame = -3 Query: 151 SFGLIILQLLTGRLPVGLAGEVRRAVSC-GKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERPV----------PSFFLCPILQEIMHDPQVAADGFTYEGKAIRDWLENGRETSPMTNLRLSHLHLTPNHALRHAIQDW 609 S G++ILQL+T + + + V A+ + +ILD AG WP R L LGL C E+ R+RPD+ ++ LE+L ++ PS F+CP+L+ +M++P VAADG+TY+ +AI +WL ++TSP+TNL L + +L N+ L AI +W Sbjct: 678 SLGVVILQLITAKPAIAITHMVEEAIGDDAEFMAILDKKAGSWPISDTRELAALGLCCTEMRRRDRPDLKDQIIPALERLRKVADKAQNLLSRTPSGPPSHFICPLLKGVMNEPCVAADGYTYDREAIEEWLRQ-KDTSPVTNLPLPNKNLIANYTLYSAIMEW 840
BLAST of DC887468 vs. ExPASy Swiss-Prot
Match: PUB55_ARATH (Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana GN=PUB55 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.019e-24 Identity = 47/70 (67.14%), Postives = 61/70 (87.14%), Query Frame = -3 Query: 148 RPVPSFFLCPILQEIMHDPQVAADGFTYEGKAIRDWLENGRETSPMTNLRLSHLHLTPNHALRHAIQDWL 357 R PS+F+CPI QE+M +P+VAADGFTYE +++R+WL+NG ETSPMTNL+L+H +L PNHALR AIQ+WL Sbjct: 495 RQPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALRSAIQEWL 564
BLAST of DC887468 vs. ExPASy Swiss-Prot
Match: PUB36_ARATH (U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36 PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.392e-21 Identity = 47/81 (58.02%), Postives = 55/81 (67.90%), Query Frame = -3 Query: 148 KELEQLHVAEERPVPSFFLCPILQEIMHDPQVAADGFTYEGKAIRDWLENGRETSPMTNLRLSHLHLTPNHALRHAIQDWL 390 +E E+ + R P +F+CPI +IM DP VAADGFTYEG+AI W E G ETSPM N RL H L PN ALR AIQ+WL Sbjct: 340 REEEEASTSNHREPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLALRSAIQEWL 420 The following BLAST results are available for this feature:
BLAST of DC887468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887468 ID=DC887468; Name=DC887468; organism=Citrus sinensis; type=EST; length=611bpback to top |