CN189170
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189170 vs. ExPASy Swiss-Prot
Match: SKP1B_ARATH (SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.218e-67 Identity = 127/171 (74.27%), Postives = 142/171 (83.04%), Query Frame = 2 Query: 35 MSSEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKD-------------DKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 508 MS+ +KITLKSSDGE FE++E VALESQTIKHM+EDDC D IPLPNVTS ILSKVIEYCK+HVEA + S+++DLKTWD++F+KVDQ TLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDF+P+EEEEVRRENQWAFE Sbjct: 1 MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYCKRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
BLAST of CN189170 vs. ExPASy Swiss-Prot
Match: SKP1A_ARATH (SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.489e-65 Identity = 123/159 (77.36%), Postives = 138/159 (86.79%), Query Frame = 2 Query: 41 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDK---STEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 508 S KKI LKSSDGE+FEVEE VALESQTI HMVEDDC D +PLPNVTS IL+KVIEYCK+HVEA + + + +++DDLK WDADF+K+DQ TLF+LILAANYLNIK LLDLTCQTVADMIKGKTPEEIR TFNIKNDF+P+EEEEVRRENQWAFE Sbjct: 2 SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
BLAST of CN189170 vs. ExPASy Swiss-Prot
Match: ASK4_ARATH (SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 3.552e-59 Identity = 113/160 (70.62%), Postives = 134/160 (83.75%), Query Frame = 2 Query: 41 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGS---GDKKDDKSTE-DDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 508 ++K I LKSSDGE+FE+EE VA++SQTIKHM+EDDCAD IPLPNVT IL+KVIEYCKKHVEA + GDK S E D+LK WD++FVKVDQ TLFDLILAANYLNI GLLDLTC+ VAD ++GKTPE++R FNIKND++P+EE EVR EN+WAFE Sbjct: 4 TKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163
BLAST of CN189170 vs. ExPASy Swiss-Prot
Match: ASK3_ARATH (SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 3.007e-58 Identity = 112/160 (70.00%), Postives = 132/160 (82.50%), Query Frame = 2 Query: 41 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGS---GDKKDDKSTED-DLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 508 ++K I LKSSDGE+FEVEE VA+ESQTIKHM+EDDC D IPLPNVT IL+KVIEYCKKHVEA + GDK STE+ +LKTWD DFVKVD TLFDL+ AANYLNI GLLDLTC+ VAD ++GKTP ++R+ FNIKND++P+EE EVR EN+WAFE Sbjct: 4 TKKMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163
BLAST of CN189170 vs. ExPASy Swiss-Prot
Match: ASK11_ARATH (SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.307e-53 Identity = 105/156 (67.31%), Postives = 123/156 (78.85%), Query Frame = 2 Query: 41 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 508 S K I L SSDG++FEVEE VA++SQTI HMVEDDC IPL NV S IL KVIEYCKKH + + +E+DL WD F+ ++Q+T+F+LILAANYLNIK LLDLTCQTVADMIKGKTPEEIR TFNI+NDF+P+EEE VR+ENQWAFE Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKHHV-----DEANPISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
BLAST of CN189170 vs. ExPASy Swiss-Prot
Match: ASK12_ARATH (SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 6.488e-53 Identity = 105/157 (66.88%), Postives = 123/157 (78.34%), Query Frame = 2 Query: 41 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKK-HVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 508 S K I L SSDG++FEVEE VA++SQTI HMVEDDC IPL NV S IL KVIEYCKK HV+ + +E+DL WD F+ ++Q+T+F+LILAANYLNIK L DLTCQTVADMIKGKTPEEIR TFNI+NDF+P+EEE VR+ENQWAFE Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKYHVDEAN------PISEEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
BLAST of CN189170 vs. ExPASy Swiss-Prot
Match: ASK13_ARATH (SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.141e-50 Identity = 97/156 (62.18%), Postives = 122/156 (78.21%), Query Frame = 2 Query: 47 KKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVKV--DQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 508 K + L SSDGE+F+VEE VA++SQTI HM+EDDC +P+ NVT ILSKVIEYCKKHV + S ++ ++D+LK WDA+F+K +TLFD++LAANYLNIK LLDL CQTVADMI GK P+EIR I+NDF+P+EEEE+R+ENQWAFE Sbjct: 3 KMVMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKHVVSDSPTEE----SKDELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTVADMITGKKPDEIRALLGIENDFTPEEEEEIRKENQWAFE 154
BLAST of CN189170 vs. ExPASy Swiss-Prot
Match: ASK14_ARATH (SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 6.285e-48 Identity = 98/157 (62.42%), Postives = 119/157 (75.80%), Query Frame = 2 Query: 41 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVK-VDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 508 S KI L SSDGE+FEVEE VA + + ++HM+EDDC T +PL NVT ILS V+EYCKKHV D++S D+ KTWD +F+K DQ T+F L+LAANYLNIKGLLDL+ QTVAD IK KTPEEIR+ FNI+NDF+P+EE VR+EN WAFE Sbjct: 2 SSNKIVLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCKKHVV-------DEES--DEFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNIENDFTPEEEAAVRKENAWAFE 149
BLAST of CN189170 vs. ExPASy Swiss-Prot
Match: ASK10_ARATH (SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.829e-47 Identity = 97/157 (61.78%), Postives = 114/157 (72.61%), Query Frame = 2 Query: 41 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKH-VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 508 S KKI LKSSDG +FEVEE A + QTI HM EDDC D IPLP VT IL VIEYC KH V+A + +++DLK WD +F++ Q+T+FDLI+AANYLNIK LLDL CQTVADMIK T E RK FNI+ND++ +EEE VRRENQW FE Sbjct: 2 STKKIILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCNKHHVDAAN------PCSDEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVADMIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQWGFE 152
BLAST of CN189170 vs. ExPASy Swiss-Prot
Match: ASK15_ARATH (SKP1-like protein 15 OS=Arabidopsis thaliana GN=ASK15 PE=2 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 2.388e-47 Identity = 97/166 (58.43%), Postives = 120/166 (72.29%), Query Frame = 2 Query: 41 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGD--------KKDDKSTEDDLKTWDADFVK-VDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEE-VRRENQWAFE 508 S KI L SSDGE+F+VEE VA + Q +KH++EDDC IPL NVT ILS V+EYCKKHV+ D KK D + +L WDA+F+K +D T+F LILAANYLN++GLL LTCQTVAD IK KTPEE+R+ FNI+NDF+ +EEEE +R+EN WAFE Sbjct: 2 SSNKIVLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCKKHVDDVVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNIDMETIFKLILAANYLNVEGLLGLTCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAFE 167 The following BLAST results are available for this feature:
BLAST of CN189170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189170 ID=CN189170; Name=CN189170; organism=Citrus sinensis; type=EST; length=682bpback to top |