CN189077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189077 vs. ExPASy Swiss-Prot
Match: SND1_RAT (Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus GN=Snd1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.557e-14 Identity = 58/172 (33.72%), Postives = 87/172 (50.58%), Query Frame = -3 Query: 88 EKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSST--PPLAQLCSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXLHVTLVAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDIQSDDED 597 EKVES K VFYIDYGN+E++P +L + P+ S+ P A + A+I++P ED +A + + N+ VE +S HVTL D++ + +V+EGL VE RK + Q + QE AK+AR+ +W+YGD ++DD D Sbjct: 750 EKVESPA-KVHVFYIDYGNREILPSTRLGALPPAFSTRVLPAQATEYAFAFIQVPQDEDAR-TDAVDSVVRDIQNTQCLLN--VEHLSASCP-----------HVTLQFADSKGDVGLGLVKEGLVMVEVRKE---KQFQKVITEYLNAQESAKSARLNLWRYGDFRADDAD 903
BLAST of CN189077 vs. ExPASy Swiss-Prot
Match: SND1_MOUSE (Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus GN=Snd1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.557e-14 Identity = 58/172 (33.72%), Postives = 87/172 (50.58%), Query Frame = -3 Query: 88 EKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSST--PPLAQLCSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXLHVTLVAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDIQSDDED 597 EKVES K VFYIDYGN+E++P +L + P+ S+ P A + A+I++P ED +A + + N+ VE +S HVTL D++ + +V+EGL VE RK + Q + QE AK+AR+ +W+YGD ++DD D Sbjct: 751 EKVESPA-KVHVFYIDYGNREILPSTRLGTLPPAFSTRVLPAQATEYAFAFIQVPQDEDAR-TDAVDSVVRDIQNTQCLLN--VEHLSASCP-----------HVTLQFADSKGDVGLGLVKEGLVMVEVRKE---KQFQKVITEYLNAQESAKSARLNLWRYGDFRADDAD 904
BLAST of CN189077 vs. ExPASy Swiss-Prot
Match: SND1_HUMAN (Staphylococcal nuclease domain-containing protein 1 OS=Homo sapiens GN=SND1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.557e-14 Identity = 56/172 (32.56%), Postives = 88/172 (51.16%), Query Frame = -3 Query: 88 EKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSS--TPPLAQLCSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXLHVTLVAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDIQSDDED 597 EKVES K VFYIDYGN+E++P +L + P+ S+ P A + A+I++P +D+ +A + + N+ + L+ S HVTL D++ + +V+EGL VE RK + Q + QE AK+AR+ +W+YGD ++DD D Sbjct: 751 EKVESPA-KIHVFYIDYGNREVLPSTRLGTLSPAFSTRVLPAQATEYAFAFIQVPQ-DDDARTDAVDSVVRDIQNT----QCLLNVEHLS---------AGCPHVTLQFADSKGDVGLGLVKEGLVMVEVRK---EKQFQKVITEYLNAQESAKSARLNLWRYGDFRADDAD 904
BLAST of CN189077 vs. ExPASy Swiss-Prot
Match: SND1_PONAB (Staphylococcal nuclease domain-containing protein 1 OS=Pongo abelii GN=SND1 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 8.564e-14 Identity = 56/172 (32.56%), Postives = 88/172 (51.16%), Query Frame = -3 Query: 88 EKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSS--TPPLAQLCSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXLHVTLVAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDIQSDDED 597 EKVES K VFYIDYGN+E++P +L + P+ S+ P A + A+I++P +D+ +A + + N+ + L+ S HVTL D++ + +V+EGL VE RK + Q + QE AK+AR+ +W+YGD ++DD D Sbjct: 751 EKVESPA-KIHVFYIDYGNREVLPSTRLGTLPPAFSTRVLPAQATEYAFAFIQVPQ-DDDARTDAVDSVVRDIQNT----QCLLNVEHLS---------AGCPHVTLQFADSKGDVGLGLVKEGLVMVEVRK---EKQFQKVITEYLNAQESAKSARLNLWRYGDFRADDAD 904
BLAST of CN189077 vs. ExPASy Swiss-Prot
Match: SND1_BOVIN (Staphylococcal nuclease domain-containing protein 1 OS=Bos taurus GN=SND1 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.461e-13 Identity = 57/172 (33.14%), Postives = 87/172 (50.58%), Query Frame = -3 Query: 88 EKVESVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSST--PPLAQLCSLAYIKIPALEDEYGPEAAEFLNEHTYNSSNEFRALVEERDSSXXXXXXXXXXXXLHVTLVAVDAEISINTLMVQEGLARVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDIQSDDED 597 EKVES K VFYIDYGN+E++P +L + P+ S+ P A + A+I++P ED +A + + N+ + L+ S HVTL D++ + +V+EGL VE RK + Q + QE AK+AR+ +W+YGD ++DD D Sbjct: 751 EKVESPA-KVHVFYIDYGNREILPSTRLGTLPPAFSTRVLPAQATEYAFAFIQVPQDEDAR-TDAVDSVVRDIQNT----QCLLNVEHLSAGCP---------HVTLQFADSKGDVGLGLVKEGLVMVEVRKE---KQFQKVITEYLNAQESAKSARLNLWRYGDFRADDAD 904 The following BLAST results are available for this feature:
BLAST of CN189077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189077 ID=CN189077; Name=CN189077; organism=Citrus sinensis; type=EST; length=626bpback to top |