CN181874
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181874 vs. ExPASy Swiss-Prot
Match: COPZ1_ARATH (Coatomer subunit zeta-1 OS=Arabidopsis thaliana GN=At1g60970 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.243e-51 Identity = 104/142 (73.24%), Postives = 116/142 (81.69%), Query Frame = -2 Query: 287 EAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXIVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 712 EAFEK+VFTKTQKTNARTE E+ LE N++VYKFVQDLHFFVTGGE+ENELILA+VL+G FDAV LLLR NVDK+EA I+DGGI+LETDANVIAGK +S D APLSEQTISQALATAREHLTRSL+K Sbjct: 36 EAFEKSVFTKTQKTNARTEVEVTALENNIVVYKFVQDLHFFVTGGEEENELILASVLEGLFDAVTLLLRSNVDKREALDNLDLIFLSFDEIIDGGIVLETDANVIAGKAGINSTDPNAPLSEQTISQALATAREHLTRSLMK 177
BLAST of CN181874 vs. ExPASy Swiss-Prot
Match: COPZ2_ORYSJ (Coatomer subunit zeta-2 OS=Oryza sativa subsp. japonica GN=COPZ2 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.321e-48 Identity = 100/141 (70.92%), Postives = 115/141 (81.56%), Query Frame = -2 Query: 287 AFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXIVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 709 AFEK+VFTKT KTNAR+EAEI + +G ++VYKFVQDLHFFVT G+DENELI+A VLQGF D+VGLLLRG+V+K+ A IVDGGIILETDAN IAGKVA+++VD AP SEQTISQALATAREHL RSLLK Sbjct: 42 AFEKSVFTKTLKTNARSEAEITLFDGYIVVYKFVQDLHFFVTAGDDENELIIANVLQGFSDSVGLLLRGDVEKRTALENLDLILLCIDEIVDGGIILETDANTIAGKVATNAVDGSAPFSEQTISQALATAREHLARSLLK 182
BLAST of CN181874 vs. ExPASy Swiss-Prot
Match: COPZ3_ARATH (Coatomer subunit zeta-3 OS=Arabidopsis thaliana GN=At4g08520 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.172e-46 Identity = 95/140 (67.86%), Postives = 110/140 (78.57%), Query Frame = -2 Query: 290 AFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXIVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLL 709 AFEK VF+KT KTNARTEAEI +LE N++VYKF QDLHFFVTGGE+ENEL+L++VLQGFFDAV LLLR NV+K EA +VD G++LETDANVIAGKVA S + LSEQT++QALATAREHL RSLL Sbjct: 41 AFEKYVFSKTSKTNARTEAEITLLESNIVVYKFAQDLHFFVTGGENENELVLSSVLQGFFDAVALLLRNNVEKMEALENLDLIFLCLDEMVDQGMVLETDANVIAGKVAMQSAEASGSLSEQTLTQALATAREHLARSLL 180
BLAST of CN181874 vs. ExPASy Swiss-Prot
Match: COPZ2_ARATH (Coatomer subunit zeta-2 OS=Arabidopsis thaliana GN=At3g09800 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 6.320e-46 Identity = 95/140 (67.86%), Postives = 109/140 (77.86%), Query Frame = -2 Query: 290 AFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXIVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLL 709 +FEK VF+KT KTNARTEAEI +L+ N+IVYKF QDLHFFVTGGE+ENELILA+VLQGFFDAV LLLR NV+K EA +VD G++LETD NVIAGKVA S + LSEQT++QALATAREHL RSLL Sbjct: 39 SFEKYVFSKTSKTNARTEAEITLLDSNIIVYKFAQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFLCLDEMVDQGVVLETDPNVIAGKVAMQSTEASGSLSEQTLTQALATAREHLARSLL 178
BLAST of CN181874 vs. ExPASy Swiss-Prot
Match: COPZ1_ORYSJ (Coatomer subunit zeta-1 OS=Oryza sativa subsp. japonica GN=COPZ1 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.246e-42 Identity = 87/140 (62.14%), Postives = 107/140 (76.43%), Query Frame = -2 Query: 290 AFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXIVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLL 709 AFEK+VF KTQK A EAEI M +G+++VYKF+QDLHFFVTGGE+ENELILA+VLQGF DAV ++LR NVDK+ A IVDGGI+LET+ +VIA KV++H ++ L+EQTI QAL TAREHLT+SLL Sbjct: 37 AFEKSVFVKTQKATAGAEAEIVMFDGHIVVYKFIQDLHFFVTGGEEENELILASVLQGFTDAVDIILRNNVDKRTALENLDLILLCLDEIVDGGIVLETEGSVIAEKVSAHGIEGATSLAEQTIVQALTTAREHLTKSLL 176
BLAST of CN181874 vs. ExPASy Swiss-Prot
Match: COPZ3_ORYSJ (Coatomer subunit zeta-3 OS=Oryza sativa subsp. japonica GN=Os01g0838800 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 8.273e-38 Identity = 79/140 (56.43%), Postives = 100/140 (71.43%), Query Frame = -2 Query: 293 EAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXIVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSL 712 +AFEK+VF KTQKT+ARTEAEI M + +VYKF+QDLHFFVTGG++ENELILA+VLQGF +A+ LLR V ++ A +VDGGI+LETDA I KV+ H ++ L+EQ +S ALATAREH RS+ Sbjct: 36 QAFEKSVFAKTQKTSARTEAEIVMFDSYFVVYKFIQDLHFFVTGGDEENELILASVLQGFSEAIDYLLRNKVHRRAALENLDLIFLCLDEVVDGGIVLETDAKAILEKVSGHGLEGSGSLTEQKLSSALATAREHFARSI 175
BLAST of CN181874 vs. ExPASy Swiss-Prot
Match: COPZ1_BOVIN (Coatomer subunit zeta-1 OS=Bos taurus GN=COPZ1 PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 1.978e-23 Identity = 64/142 (45.07%), Postives = 88/142 (61.97%), Query Frame = -2 Query: 287 EAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXIVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 712 +AFEK +F KT RT++EIA+LEG +VYK DL+F+V G ENEL+L TVL FD++ +LR NV+K+ IVDGG+ILE+D + +VA DV PL+EQT+SQ L +A+E + SLL+ Sbjct: 42 KAFEKNIFNKTH----RTDSEIALLEGLTVVYKSSIDLYFYVIGSSYENELMLMTVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRGEDV--PLTEQTVSQVLQSAKEQIKWSLLR 177
BLAST of CN181874 vs. ExPASy Swiss-Prot
Match: COPZ1_PONAB (Coatomer subunit zeta-1 OS=Pongo abelii GN=COPZ1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.518e-23 Identity = 63/142 (44.37%), Postives = 87/142 (61.27%), Query Frame = -2 Query: 287 EAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXIVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 712 +AFEK +F KT RT++EIA+LEG +VYK DL+F+V G ENEL+L VL FD++ +LR NV+K+ IVDGG+ILE+D + +VA DV PL+EQT+SQ L +A+E + SLL+ Sbjct: 42 KAFEKNIFNKTH----RTDSEIALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRGEDV--PLTEQTVSQVLQSAKEQIKWSLLR 177
BLAST of CN181874 vs. ExPASy Swiss-Prot
Match: COPZ1_MOUSE (Coatomer subunit zeta-1 OS=Mus musculus GN=Copz1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.518e-23 Identity = 63/142 (44.37%), Postives = 87/142 (61.27%), Query Frame = -2 Query: 287 EAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXIVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 712 +AFEK +F KT RT++EIA+LEG +VYK DL+F+V G ENEL+L VL FD++ +LR NV+K+ IVDGG+ILE+D + +VA DV PL+EQT+SQ L +A+E + SLL+ Sbjct: 42 KAFEKNIFNKTH----RTDSEIALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRGEDV--PLTEQTVSQVLQSAKEQIKWSLLR 177
BLAST of CN181874 vs. ExPASy Swiss-Prot
Match: COPZ1_HUMAN (Coatomer subunit zeta-1 OS=Homo sapiens GN=COPZ1 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.518e-23 Identity = 63/142 (44.37%), Postives = 87/142 (61.27%), Query Frame = -2 Query: 287 EAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXIVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 712 +AFEK +F KT RT++EIA+LEG +VYK DL+F+V G ENEL+L VL FD++ +LR NV+K+ IVDGG+ILE+D + +VA DV PL+EQT+SQ L +A+E + SLL+ Sbjct: 42 KAFEKNIFNKTH----RTDSEIALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRGEDV--PLTEQTVSQVLQSAKEQIKWSLLR 177 The following BLAST results are available for this feature:
BLAST of CN181874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181874 ID=CN181874; Name=CN181874; organism=Citrus sinensis; type=EST; length=713bpback to top |