CX300688

Overview
NameCX300688
Unique NameCX300688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length377
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT_CHLKE (ADP,ATP carrier protein OS=Chlorella kessleri PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 3.268e-46
Identity = 83/116 (71.55%), Postives = 100/116 (86.21%), Query Frame = 2
Query:   29 SFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKKEFGMFFLTNMASGG 376
            +F+ D  AGG +GA++KTA APIERVKL++QTQD+NP+IKSG+V RYTGI NCF RV  EQG+A+FWRGN  NV+RYFPTQAFNFAFKDTIKG+FPKYSPK +F  FF+ N+ASGG
Sbjct:   40 AFVKDLLAGGTAGAISKTAVAPIERVKLLLQTQDSNPMIKSGQVPRYTGIVNCFVRVSSEQGVASFWRGNLANVVRYFPTQAFNFAFKDTIKGLFPKYSPKTDFWRFFVVNLASGG 155          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT_CHLRE (ADP,ATP carrier protein OS=Chlamydomonas reinhardtii GN=ABT PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 7.814e-32
Identity = 70/117 (59.83%), Postives = 85/117 (72.65%), Query Frame = 2
Query:   29 SFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVAR-YTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKKEFGMFFLTNMASGG 376
            +F+VDF AGG+S AV+KTA APIERVKL+IQ QD   +IK G++A  Y GIG CF R  +E+G  + WRGN  NVIRYFPTQA NFAFKD  K MF  ++  KE+  +F  NMASGG
Sbjct:    7 NFMVDFLAGGLSAAVSKTAAAPIERVKLLIQNQDE--MIKQGRLASPYKGIGECFVRTVREEGFGSLWRGNTANVIRYFPTQALNFAFKDKFKRMF-GFNKDKEYWKWFAGNMASGG 120          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT_KLULA (ADP,ATP carrier protein OS=Kluyveromyces lactis GN=AAC PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 8.640e-31
Identity = 68/118 (57.63%), Postives = 85/118 (72.03%), Query Frame = 2
Query:   26 SSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKV-ARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKKEFGMFFLTNMASGG 376
            S+F +DF  GG+S AV+KTA APIERVKL+IQ QD   +IK G +  RYTGI  CF R   ++G+A+FWRGN  NVIRYFPTQA NFAFKD IK MF  +  ++ +  +F  N+ASGG
Sbjct:    8 SNFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDE--MIKQGSLDRRYTGIVECFKRTAADEGVASFWRGNTANVIRYFPTQALNFAFKDKIKAMF-GFKKEEGYAKWFAGNLASGG 122          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT1_GOSHI (ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.600e-30
Identity = 65/118 (55.08%), Postives = 83/118 (70.34%), Query Frame = 2
Query:   26 SSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVAR-YTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKKEFGMFFLTNMASGG 376
            SSF +DF  GG+S AV+KTA APIERVKL+IQ QD   +IKSG+++  Y GIG+CF R  +++G  + WRGN  NVIRYFPTQA NFAFKD  K +F     +  +  +F  N+ASGG
Sbjct:   84 SSFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDE--MIKSGRLSEPYKGIGDCFKRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGG 199          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT2_SOLTU (ADP,ATP carrier protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 7.314e-30
Identity = 67/125 (53.60%), Postives = 88/125 (70.40%), Query Frame = 2
Query:    5 EQKGPSASSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVAR-YTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKKEFGMFFLTNMASGG 376
            ++KG +A  F  DF  GG+S AV+KTA APIERVKL+IQ QD   +IK+G+++  Y GIG+CF+R  +++G AA WRGN  NVIRYFPTQA NFAFKD  K +F     +  +  +F  N+ASGG
Sbjct:   78 QEKGLAA--FATDFLMGGVSAAVSKTAAAPIERVKLLIQNQDE--MIKAGRLSEPYKGIGDCFSRTIKDEGFAALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGG 198          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT2_YEAST (ADP,ATP carrier protein 2 OS=Saccharomyces cerevisiae GN=AAC2 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 9.553e-30
Identity = 66/118 (55.93%), Postives = 85/118 (72.03%), Query Frame = 2
Query:   26 SSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVAR-YTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKKEFGMFFLTNMASGG 376
            S+FL+DF  GG+S AVAKTA +PIERVKL+IQ QD   ++K G + R Y GI +CF R   ++G+ +FWRGN  NVIRYFPTQA NFAFKD IK MF  +  ++ +  +F  N+ASGG
Sbjct:   21 SNFLIDFLMGGVSAAVAKTAASPIERVKLLIQNQDE--MLKQGTLDRKYAGILDCFKRTATQEGVISFWRGNTANVIRYFPTQALNFAFKDKIKAMF-GFKKEEGYAKWFAGNLASGG 135          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT_SCHPO (ADP,ATP carrier protein OS=Schizosaccharomyces pombe GN=anc1 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.248e-29
Identity = 64/118 (54.24%), Postives = 82/118 (69.49%), Query Frame = 2
Query:   26 SSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVA-RYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKKEFGMFFLTNMASGG 376
            S+F  DF  GG+S AV+KTA APIERVKL+IQ QD   +I++G+++ RY GIG CF R   E+G+ + WRGN  NV+RYFPTQA NFAFKD  K MF     +  +  +F  N+ASGG
Sbjct:   25 STFFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDE--MIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMFGYKKERDGYAKWFAGNLASGG 140          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT_ORYSJ (ADP,ATP carrier protein, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0718900 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.629e-29
Identity = 64/117 (54.70%), Postives = 84/117 (71.79%), Query Frame = 2
Query:   29 SFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVAR-YTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKKEFGMFFLTNMASGG 376
            +F++DF  GG+S AV+KTA APIERVKL+IQ QD   +IK+G+++  Y GIG+CF R  +++G A+ WRGN  NVIRYFPTQA NFAFKD  K +F     K  +  +F  N+ASGG
Sbjct:   81 NFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDE--MIKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFGGNLASGG 195          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT2_WHEAT (ADP,ATP carrier protein 2, mitochondrial OS=Triticum aestivum GN=ANT-G2 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.629e-29
Identity = 67/125 (53.60%), Postives = 86/125 (68.80%), Query Frame = 2
Query:    5 EQKGPSASSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVAR-YTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKKEFGMFFLTNMASGG 376
            E+KG    +F +DF  GG+S AV+KTA APIERVKL+IQ QD   +IK+G+++  Y GIG+CF R  +++G  + WRGN  NVIRYFPTQA NFAFKD  K MF     K  +  +F  N+ASGG
Sbjct:   24 EKKG--VKNFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDE--MIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRMFNFKKDKDGYWKWFGGNLASGG 144          
BLAST of CX300688 vs. ExPASy Swiss-Prot
Match: ADT1_WHEAT (ADP,ATP carrier protein 1, mitochondrial OS=Triticum aestivum GN=ANT-G1 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.629e-29
Identity = 67/125 (53.60%), Postives = 86/125 (68.80%), Query Frame = 2
Query:    5 EQKGPSASSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVAR-YTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKKEFGMFFLTNMASGG 376
            E+KG    +F +DF  GG+S AV+KTA APIERVKL+IQ QD   +IK+G+++  Y GIG+CF R  +++G  + WRGN  NVIRYFPTQA NFAFKD  K MF     K  +  +F  N+ASGG
Sbjct:   24 EKKG--VKNFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDE--MIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRMFNFKKDKDGYWKWFGGNLASGG 144          
The following BLAST results are available for this feature:
BLAST of CX300688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
ADT_CHLKE3.268e-4671.55ADP,ATP carrier protein OS=Chlorella kessleri PE=3... [more]
ADT_CHLRE7.814e-3259.83ADP,ATP carrier protein OS=Chlamydomonas reinhardt... [more]
ADT_KLULA8.640e-3157.63ADP,ATP carrier protein OS=Kluyveromyces lactis GN... [more]
ADT1_GOSHI5.600e-3055.08ADP,ATP carrier protein 1, mitochondrial OS=Gossyp... [more]
ADT2_SOLTU7.314e-3053.60ADP,ATP carrier protein, mitochondrial (Fragment) ... [more]
ADT2_YEAST9.553e-3055.93ADP,ATP carrier protein 2 OS=Saccharomyces cerevis... [more]
ADT_SCHPO1.248e-2954.24ADP,ATP carrier protein OS=Schizosaccharomyces pom... [more]
ADT_ORYSJ1.629e-2954.70ADP,ATP carrier protein, mitochondrial OS=Oryza sa... [more]
ADT2_WHEAT1.629e-2953.60ADP,ATP carrier protein 2, mitochondrial OS=Tritic... [more]
ADT1_WHEAT1.629e-2953.60ADP,ATP carrier protein 1, mitochondrial OS=Tritic... [more]

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Properties
Property NameValue
Genbank descriptionC08001B07SK PhyRootSw1 Citrus sinensis cDNA clone C08001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300688 ID=CX300688; Name=CX300688; organism=Citrus sinensis; type=EST; length=377bp
GTCTGAACAAAAAGGTCCAAGCGCTTCTAGTTTCCTTGTTGACTTCGCTG
CCGGAGGTATCTCTGGTGCCGTTGCCAAGACTGCCACCGCTCCTATTGAG
AGAGTCAAGTTGATCATCCAGACCCAGGATGCCAACCCTTTAATCAAGTC
CGGCAAGGTCGCCAGATACACCGGTATTGGCAACTGCTTCACCCGTGTGT
ACCAGGAGCAAGGTTTAGCTGCTTTCTGGCGTGGTAACTTCACCAACGTC
ATCCGTTATTTCCCTACCCAGGCTTTCAACTTCGCCTTCAAGGATACCAT
CAAGGGTATGTTCCCAAAGTACAGCCCAAAGAAGGAGTTCGGTATGTTCT
TCCTTACTAACATGGCTTCCGGTGGTC
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