CK939315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK939315 vs. ExPASy Swiss-Prot
Match: RS12_HORVU (40S ribosomal protein S12 OS=Hordeum vulgare GN=RPS12 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.258e-42 Identity = 80/92 (86.96%), Postives = 89/92 (96.74%), Query Frame = 1 Query: 1 AKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCAVVKDFGEESDGLNVVQQHIKS 276 AK IEKHAAQLCVLAEDC+QPDYVKLVKALCA+HNV L+TVPSAKTLGEWAGLCKID+EGKARKVVGCSC VVKD+GEES+GLN+VQQ++KS Sbjct: 51 AKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKVVGCSCIVVKDYGEESEGLNIVQQYVKS 142
BLAST of CK939315 vs. ExPASy Swiss-Prot
Match: RS122_ARATH (40S ribosomal protein S12-2 OS=Arabidopsis thaliana GN=RPS12C PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 7.635e-40 Identity = 75/93 (80.65%), Postives = 85/93 (91.40%), Query Frame = 1 Query: 1 AKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCAVVKDFGEESDGLNVVQQHIKSH 279 AK+IEK AQLCVLAEDCNQPDYVKLVKALCADH++ LLTVPSAKTLGEWAGLCKIDSEG ARKVVGCSC V+KDFGEE+ LN+V++H+ S+ Sbjct: 52 AKLIEKRNAQLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVIKDFGEETTALNIVKKHLDSN 144
BLAST of CK939315 vs. ExPASy Swiss-Prot
Match: RS121_ARATH (40S ribosomal protein S12-1 OS=Arabidopsis thaliana GN=RPS12A PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 2.456e-38 Identity = 76/92 (82.61%), Postives = 81/92 (88.04%), Query Frame = 1 Query: 1 AKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCAVVKDFGEESDGLNVVQQHIKS 276 AK+IEK AQL VLAEDCNQPDYVKLVKALCADH V LLTVPSAKTLGEWAGLCKIDSEG ARKVVGCSC VVKDFGEE+ L++V +HI S Sbjct: 52 AKLIEKRVAQLVVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVVKDFGEETTALSIVNKHIAS 143
BLAST of CK939315 vs. ExPASy Swiss-Prot
Match: RS12_ORENI (40S ribosomal protein S12 OS=Oreochromis niloticus GN=rps12 PE=2 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 3.009e-28 Identity = 55/92 (59.78%), Postives = 72/92 (78.26%), Query Frame = 1 Query: 1 AKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCAVVKDFGEESDGLNVVQQHIKS 276 AK ++K A LCVLA +C++P YVKLV+ALCA+H ++L+ V K LGEW GLCKID EGK RKVVGCSC VVKD+G+ES +V++++ KS Sbjct: 39 AKALDKRQAHLCVLAANCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFKS 130
BLAST of CK939315 vs. ExPASy Swiss-Prot
Match: RS12_CYAPA (40S ribosomal protein S12 OS=Cyanophora paradoxa GN=RPS12 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.133e-28 Identity = 54/91 (59.34%), Postives = 72/91 (79.12%), Query Frame = 1 Query: 1 AKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCAVVKDFGEESDGLNVVQQHIK 273 AK +++ +AQLCVLA + N+P Y +LV+ALCA+H ++L+ VP K LGEW GLCKID EGKARKVVGCSCAV+ FGEES+ V+ +++K Sbjct: 44 AKALDQRSAQLCVLAANVNEPAYTRLVEALCAEHGINLIKVPENKQLGEWVGLCKIDKEGKARKVVGCSCAVITKFGEESEARQVLMEYLK 134
BLAST of CK939315 vs. ExPASy Swiss-Prot
Match: RS12_PIG (40S ribosomal protein S12 OS=Sus scrofa GN=RPS12 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 6.704e-28 Identity = 54/91 (59.34%), Postives = 71/91 (78.02%), Query Frame = 1 Query: 1 AKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCAVVKDFGEESDGLNVVQQHIK 273 AK ++K A LCVLA +C++P YVKLV+ALCA+H ++L+ V K LGEW GLCKID EGK RKVVGCSC VVKD+G+ES +V++++ K Sbjct: 39 AKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
BLAST of CK939315 vs. ExPASy Swiss-Prot
Match: RS12_HUMAN (40S ribosomal protein S12 OS=Homo sapiens GN=RPS12 PE=1 SV=3) HSP 1 Score: 123.25 bits (308), Expect = 6.704e-28 Identity = 54/91 (59.34%), Postives = 71/91 (78.02%), Query Frame = 1 Query: 1 AKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCAVVKDFGEESDGLNVVQQHIK 273 AK ++K A LCVLA +C++P YVKLV+ALCA+H ++L+ V K LGEW GLCKID EGK RKVVGCSC VVKD+G+ES +V++++ K Sbjct: 39 AKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
BLAST of CK939315 vs. ExPASy Swiss-Prot
Match: RS12_CHICK (40S ribosomal protein S12 OS=Gallus gallus GN=RPS12 PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 6.704e-28 Identity = 54/91 (59.34%), Postives = 71/91 (78.02%), Query Frame = 1 Query: 1 AKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCAVVKDFGEESDGLNVVQQHIK 273 AK ++K A LCVLA +C++P YVKLV+ALCA+H ++L+ V K LGEW GLCKID EGK RKVVGCSC VVKD+G+ES +V++++ K Sbjct: 39 AKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
BLAST of CK939315 vs. ExPASy Swiss-Prot
Match: RS12_BOVIN (40S ribosomal protein S12 OS=Bos taurus GN=RPS12 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 6.704e-28 Identity = 54/91 (59.34%), Postives = 71/91 (78.02%), Query Frame = 1 Query: 1 AKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCAVVKDFGEESDGLNVVQQHIK 273 AK ++K A LCVLA +C++P YVKLV+ALCA+H ++L+ V K LGEW GLCKID EGK RKVVGCSC VVKD+G+ES +V++++ K Sbjct: 39 AKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
BLAST of CK939315 vs. ExPASy Swiss-Prot
Match: RS12_XENLA (40S ribosomal protein S12 OS=Xenopus laevis GN=rps12 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 9.680e-27 Identity = 53/91 (58.24%), Postives = 70/91 (76.92%), Query Frame = 1 Query: 1 AKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCAVVKDFGEESDGLNVVQQHIK 273 AK ++K A LCVLA +C++P YVKLV+ALCA+ ++L+ V K LGEW GLCKID EGK RKVVGCSC VVKD+G+ES +V++++ K Sbjct: 39 AKALDKRQAHLCVLASNCDEPMYVKLVEALCAEPQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129 The following BLAST results are available for this feature:
BLAST of CK939315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939315 ID=CK939315; Name=CK939315; organism=Citrus sinensis; type=EST; length=510bpback to top |