CK939299
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK939299 vs. ExPASy Swiss-Prot
Match: RL24_PRUAV (60S ribosomal protein L24 OS=Prunus avium GN=RPL24 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 2.212e-40 Identity = 83/104 (79.81%), Postives = 87/104 (83.65%), Query Frame = 2 Query: 2 KCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIXXXXXXXXXXXXXVTSKSKTQ 313 KCKRYFHNRLKPSKLTWT+MYRKQHKKDIA EAVKK+RR+TKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERI VT K+Q Sbjct: 37 KCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVTKSQKSQ 140
BLAST of CK939299 vs. ExPASy Swiss-Prot
Match: RL24_CICAR (60S ribosomal protein L24 OS=Cicer arietinum GN=RPL24 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 2.070e-38 Identity = 79/102 (77.45%), Postives = 86/102 (84.31%), Query Frame = 2 Query: 2 KCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIXXXXXXXXXXXXXVTSKSK 307 KCKRYFHNRLKPSKLTWT+M+RKQHKKD A EAVKK+RR+TKKPYSRSIVGATLEVIQK+RTEKPEVRDAAREAALREIKERI V SK++ Sbjct: 37 KCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVASKAQ 138
BLAST of CK939299 vs. ExPASy Swiss-Prot
Match: RL24_HORVU (60S ribosomal protein L24 OS=Hordeum vulgare GN=RPL24 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 7.867e-38 Identity = 78/104 (75.00%), Postives = 84/104 (80.77%), Query Frame = 2 Query: 2 KCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIXXXXXXXXXXXXXVTSKSKTQ 313 KCKRYFHNRLKP+KL WT+MYRKQHKKDI AEA KK+RR+TKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAALREIKERI VT K+Q Sbjct: 37 KCKRYFHNRLKPAKLCWTAMYRKQHKKDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVTKSQKSQ 140
BLAST of CK939299 vs. ExPASy Swiss-Prot
Match: RL242_ARATH (60S ribosomal protein L24-2 OS=Arabidopsis thaliana GN=RPL24B PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 8.698e-37 Identity = 73/83 (87.95%), Postives = 79/83 (95.18%), Query Frame = 2 Query: 2 KCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERI 250 KCKRYFHN+LKPSKL WT+MYRKQHKKD A EAVK++RR+TKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAALREIKERI Sbjct: 37 KCKRYFHNKLKPSKLAWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERI 119
BLAST of CK939299 vs. ExPASy Swiss-Prot
Match: RL241_ARATH (60S ribosomal protein L24-1 OS=Arabidopsis thaliana GN=RPL24A PE=1 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 1.136e-36 Identity = 73/83 (87.95%), Postives = 79/83 (95.18%), Query Frame = 2 Query: 2 KCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERI 250 KCKRYFHN+LKPSKL WT+MYRKQHKKD A EAVK++RR+TKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAALREIKERI Sbjct: 37 KCKRYFHNKLKPSKLCWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERI 119
BLAST of CK939299 vs. ExPASy Swiss-Prot
Match: RL24_NEUCR (60S ribosomal protein L24 OS=Neurospora crassa GN=rpl-24 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.222e-14 Identity = 40/82 (48.78%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 2 KCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKER 247 K + F R P ++ WT +YR+QHKK I+ E KK+ R T K R+IVGA+LEVI++RR+ +PE R AAR AA++E K + Sbjct: 35 KSESLFLQRKNPRRIAWTVLYRRQHKKGISEEVAKKRSRRTVKA-QRAIVGASLEVIKERRSMRPEARSAARLAAIKESKAK 115
BLAST of CK939299 vs. ExPASy Swiss-Prot
Match: RL24B_SCHPO (60S ribosomal protein L24-B OS=Schizosaccharomyces pombe GN=rpl24b PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.596e-14 Identity = 39/82 (47.56%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 2 KCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKER 247 K + F R P +L+WT +YR+ HKK I+ E KK+ R T K + R IVGA L+VI+++R ++PEVR AAR AAL++ K++ Sbjct: 35 KSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEKRNQRPEVRAAARAAALKQRKDK 115
BLAST of CK939299 vs. ExPASy Swiss-Prot
Match: RL24A_SCHPO (60S ribosomal protein L24-A OS=Schizosaccharomyces pombe GN=rpl24a PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.596e-14 Identity = 39/82 (47.56%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 2 KCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKER 247 K + F R P +L+WT +YR+ HKK I+ E KK+ R T K + R IVGA L+VI+++R ++PEVR AAR AAL++ K++ Sbjct: 35 KSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEKRNQRPEVRAAARAAALKQRKDK 115
BLAST of CK939299 vs. ExPASy Swiss-Prot
Match: RL24_DEBHA (60S ribosomal protein L24 OS=Debaryomyces hansenii GN=RPL24 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.723e-14 Identity = 38/81 (46.91%), Postives = 56/81 (69.14%), Query Frame = 2 Query: 2 KCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKE 244 K FH R P +++WT +YR+QHKK I+ E+ K++ R T K R+IVGA+LE+I++RR++KP R AAR+ L + KE Sbjct: 35 KSASLFHQRKNPRRISWTVLYRRQHKKGISEESAKRRTRKTVK-NQRAIVGASLELIKERRSQKPSDRKAARDVKLAKDKE 114
BLAST of CK939299 vs. ExPASy Swiss-Prot
Match: RL24_DROME (60S ribosomal protein L24 OS=Drosophila melanogaster GN=RpL24 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 7.922e-14 Identity = 38/82 (46.34%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 2 KCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKER 247 KC+R + + P K+TWT +YR++H+K I EA KK+ R T+K + R+IVGA+L I +R KPEVR A R+ A++ KE+ Sbjct: 35 KCERSYLMKRNPRKVTWTVLYRRKHRKGIEEEASKKRTRRTQK-FQRAIVGASLAEILAKRNMKPEVRKAQRDQAIKVAKEQ 115 The following BLAST results are available for this feature:
BLAST of CK939299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939299 ID=CK939299; Name=CK939299; organism=Citrus sinensis; type=EST; length=475bpback to top |