CK939274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK939274 vs. ExPASy Swiss-Prot
Match: TNPO1_MOUSE (Transportin-1 OS=Mus musculus GN=Tnpo1 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.355e-13 Identity = 31/85 (36.47%), Postives = 53/85 (62.35%), Query Frame = 3 Query: 9 IRDDTEKEDAFRGLCAMVKANPSGALSSLVFMCRAIASWHEIRSEELHNEVCQVLHGYKQMLRNGAWDQCMSALEPPVKDKLSKY 263 IRD+ EK+ AFRG+C M+ NPSG + +F C A+ASW + ++L + C++LHG+K + + W + P+K++L+ + Sbjct: 812 IRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVASWINPK-DDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAF 895
BLAST of CK939274 vs. ExPASy Swiss-Prot
Match: TNPO1_HUMAN (Transportin-1 OS=Homo sapiens GN=TNPO1 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.355e-13 Identity = 31/85 (36.47%), Postives = 53/85 (62.35%), Query Frame = 3 Query: 9 IRDDTEKEDAFRGLCAMVKANPSGALSSLVFMCRAIASWHEIRSEELHNEVCQVLHGYKQMLRNGAWDQCMSALEPPVKDKLSKY 263 IRD+ EK+ AFRG+C M+ NPSG + +F C A+ASW + ++L + C++LHG+K + + W + P+K++L+ + Sbjct: 812 IRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVASWINPK-DDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAF 895
BLAST of CK939274 vs. ExPASy Swiss-Prot
Match: TNPO1_BOVIN (Transportin-1 OS=Bos taurus GN=TNPO1 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.355e-13 Identity = 31/85 (36.47%), Postives = 53/85 (62.35%), Query Frame = 3 Query: 9 IRDDTEKEDAFRGLCAMVKANPSGALSSLVFMCRAIASWHEIRSEELHNEVCQVLHGYKQMLRNGAWDQCMSALEPPVKDKLSKY 263 IRD+ EK+ AFRG+C M+ NPSG + +F C A+ASW + ++L + C++LHG+K + + W + P+K++L+ + Sbjct: 812 IRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVASWINPK-DDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAF 895
BLAST of CK939274 vs. ExPASy Swiss-Prot
Match: TNPO2_HUMAN (Transportin-2 OS=Homo sapiens GN=TNPO2 PE=1 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12 Identity = 30/85 (35.29%), Postives = 50/85 (58.82%), Query Frame = 3 Query: 9 IRDDTEKEDAFRGLCAMVKANPSGALSSLVFMCRAIASWHEIRSEELHNEVCQVLHGYKQMLRNGAWDQCMSALEPPVKDKLSKY 263 IRD+ EK+ AFRG+C M+ NP G + +F C A+ASW + ++L + ++LHG+K + W Q P +K++L+ + Sbjct: 811 IRDNEEKDSAFRGICMMIGVNPGGVVQDFIFFCDAVASWVSPK-DDLRDMFYKILHGFKDQVGEDNWQQFSEQFPPLLKERLAAF 894
BLAST of CK939274 vs. ExPASy Swiss-Prot
Match: TNPO2_MOUSE (Transportin-2 OS=Mus musculus GN=Tnpo2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12 Identity = 30/85 (35.29%), Postives = 50/85 (58.82%), Query Frame = 3 Query: 9 IRDDTEKEDAFRGLCAMVKANPSGALSSLVFMCRAIASWHEIRSEELHNEVCQVLHGYKQMLRNGAWDQCMSALEPPVKDKLSKY 263 IRD+ EK+ AFRG+C M+ NP G + +F C A+ASW + ++L + ++LHG+K + W Q P +K++L+ + Sbjct: 801 IRDNEEKDSAFRGICMMIGVNPGGVVQDFIFFCDAVASWVSPK-DDLRDMFYKILHGFKDQVGEENWQQFSEQFPPLLKERLAAF 884 The following BLAST results are available for this feature:
BLAST of CK939274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939274 ID=CK939274; Name=CK939274; organism=Citrus sinensis; type=EST; length=699bpback to top |