CK938947
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938947 vs. ExPASy Swiss-Prot
Match: RL30_LUPLU (60S ribosomal protein L30 OS=Lupinus luteus GN=RPL30 PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 3.683e-50 Identity = 92/101 (91.09%), Postives = 100/101 (99.01%), Query Frame = 1 Query: 115 HESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 417 HESINNRLALVMKSGKYTLGYKTVL+SLRSSKGKLI+++NNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKY+RV CLSI+DPGDSDIIK+LPG+ Sbjct: 11 HESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKTLPGD 111
BLAST of CK938947 vs. ExPASy Swiss-Prot
Match: RL30_EUPES (60S ribosomal protein L30 OS=Euphorbia esula GN=RPL30 PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 4.073e-49 Identity = 91/102 (89.22%), Postives = 99/102 (97.06%), Query Frame = 1 Query: 115 HESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGEH 420 HESIN+RLALVMKSGK+TLGYKTVL SLRS+KGKLI+++NNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRV CLSIID GDSDIIKS+PG+H Sbjct: 11 HESINSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDAGDSDIIKSIPGDH 112
BLAST of CK938947 vs. ExPASy Swiss-Prot
Match: RL302_ARATH (60S ribosomal protein L30-2 OS=Arabidopsis thaliana GN=RPL30B PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 9.073e-49 Identity = 90/101 (89.11%), Postives = 98/101 (97.03%), Query Frame = 1 Query: 115 HESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 417 HE IN+RLALVMKSGKYTLGYK+VL+SLR SKGKLIL+S NCPPLR+SEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSI+DPGDSDIIKS+PG+ Sbjct: 11 HEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGD 111
BLAST of CK938947 vs. ExPASy Swiss-Prot
Match: RL301_ARATH (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana GN=RPL30A PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.185e-48 Identity = 91/101 (90.10%), Postives = 99/101 (98.02%), Query Frame = 1 Query: 115 HESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 417 HE IN+RLALVMKSGKYTLGYK+VL+SLRSSKGKLIL+S+NCPPLR+SEIEYYAMLAKVGVHHYN NNVDLGTACGKYFRVSCLSI+DPGDSDIIKSLPG+ Sbjct: 11 HEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGD 111
BLAST of CK938947 vs. ExPASy Swiss-Prot
Match: RL303_ARATH (60S ribosomal protein L30-3 OS=Arabidopsis thaliana GN=RPL30C PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 2.640e-48 Identity = 90/101 (89.11%), Postives = 99/101 (98.02%), Query Frame = 1 Query: 115 HESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 417 HE IN+RLALVMKSGKYTLGYK+VL+SLRSSKGKLIL+S+NCPPLR+SEIEYYAMLAKVGVH YNGNNVDLGTACGKYFRVSCLSI+DPGDSDIIK+LPG+ Sbjct: 11 HEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGD 111
BLAST of CK938947 vs. ExPASy Swiss-Prot
Match: RL30_MAIZE (60S ribosomal protein L30 OS=Zea mays GN=RPL30 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.038e-44 Identity = 83/100 (83.00%), Postives = 95/100 (95.00%), Query Frame = 1 Query: 118 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 417 ++INN+L LVMKSGKYTLGYKTVLR+LR+SK KL++++NNCPPLRKSEIEYYAMLAKV VHH++GNNVDLGTACGKYFRV CLSIIDPGDSDIIK+ PGE Sbjct: 12 DNINNKLQLVMKSGKYTLGYKTVLRTLRNSKSKLVIIANNCPPLRKSEIEYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTTPGE 111
BLAST of CK938947 vs. ExPASy Swiss-Prot
Match: RL30_ORYSJ (60S ribosomal protein L30 OS=Oryza sativa subsp. japonica GN=RPL30 PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 4.361e-43 Identity = 81/96 (84.38%), Postives = 92/96 (95.83%), Query Frame = 1 Query: 118 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKS 405 ++INN+L LVMKSGKYTLGYKTVLR+LR+SK KL+++SNNCPPLRKSEIEYYAMLAKV VHH++GNNVDLGTACGKYFRV CLSIIDPGDSDIIK+ Sbjct: 12 DNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEIEYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKT 107
BLAST of CK938947 vs. ExPASy Swiss-Prot
Match: RL30_WHEAT (60S ribosomal protein L30 OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 3.125e-41 Identity = 78/96 (81.25%), Postives = 90/96 (93.75%), Query Frame = 1 Query: 118 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKS 405 E+INN+L LVMKSGKYTLGYKTVL++LRSS GKLI+L+NNCPPLRKSEIE YAMLAK+ VHH++GNNVDLGTACGKY+RV CLSI+DPGDSDII + Sbjct: 12 ENINNKLQLVMKSGKYTLGYKTVLKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVDLGTACGKYYRVCCLSILDPGDSDIIST 107
BLAST of CK938947 vs. ExPASy Swiss-Prot
Match: RL30_RAT (60S ribosomal protein L30 OS=Rattus norvegicus GN=Rpl30 PE=3 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 6.517e-39 Identity = 73/98 (74.49%), Postives = 86/98 (87.76%), Query Frame = 1 Query: 118 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP 411 ESIN+RL LVMKSGKY LGYK L+ +R K KL++L+NNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of CK938947 vs. ExPASy Swiss-Prot
Match: RL30_OPHHA (60S ribosomal protein L30 OS=Ophiophagus hannah GN=RPL30 PE=3 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 6.517e-39 Identity = 73/98 (74.49%), Postives = 86/98 (87.76%), Query Frame = 1 Query: 118 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP 411 ESIN+RL LVMKSGKY LGYK L+ +R K KL++L+NNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109 The following BLAST results are available for this feature:
BLAST of CK938947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938947 ID=CK938947; Name=CK938947; organism=Citrus sinensis; type=EST; length=578bpback to top |