CK938672
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938672 vs. ExPASy Swiss-Prot
Match: TDT_ARATH (Tonoplast dicarboxylate transporter OS=Arabidopsis thaliana GN=TDT PE=2 SV=2) HSP 1 Score: 317.005 bits (811), Expect = 6.704e-86 Identity = 166/237 (70.04%), Postives = 187/237 (78.90%), Query Frame = 1 Query: 55 MNGDHEAHPNSGDIKAPLLP---SHRQIQRSPSSHFTLKTIFTPNNFYILLGPLLCAVICVCVKLDGQ--ATSRNMLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQNLPEVPLQSTLVR----KYCKAVVLGVIYSAAVGGMSTL 738 MNG S D+K+PLLP + +R L+TIFTP N YI LGPLLCAV+C+CV L G T+RNMLGVL W+FAWWLTEAVPMPITSM PLFLFPLFGIS+AD VA+SYMDDVI+LVLGSFILALAVEHYNIH+RLALNIT++FC EP+N PLLLLGIC TTAFVSMWMHNVAAAV+MMPVATGILQ LP + +V K+ +AVVLGVIYSAAVGGMSTL Sbjct: 1 MNGGDVTVAGSDDLKSPLLPVVHNDEPFERQTVGQ-QLRTIFTPKNCYIALGPLLCAVVCLCVDLGGDETTTARNMLGVLVWMFAWWLTEAVPMPITSMTPLFLFPLFGISAADDVANSYMDDVISLVLGSFILALAVEHYNIHRRLALNITLVFCVEPLNAPLLLLGICATTAFVSMWMHNVAAAVMMMPVATGILQRLPSSSSTTEVVHPAVGKFSRAVVLGVIYSAAVGGMSTL 236
BLAST of CK938672 vs. ExPASy Swiss-Prot
Match: SDCS_STAAW (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MW2) GN=sdcS PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.209e-27 Identity = 61/161 (37.89%), Postives = 98/161 (60.87%), Query Frame = 1 Query: 265 MLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRKYCKAVVLGVIYSAAVGGMSTL 738 +L + W+ WW+TEA+P+ TS+ P+ L PL I + + V+ Y +D+I L LG FILA+A+E +N+H R+AL I L +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K+ K++VL + Y+ +GG+ TL Sbjct: 62 VLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSK---ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTL 219
BLAST of CK938672 vs. ExPASy Swiss-Prot
Match: SDCS_STAAS (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MSSA476) GN=sdcS PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.209e-27 Identity = 61/161 (37.89%), Postives = 98/161 (60.87%), Query Frame = 1 Query: 265 MLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRKYCKAVVLGVIYSAAVGGMSTL 738 +L + W+ WW+TEA+P+ TS+ P+ L PL I + + V+ Y +D+I L LG FILA+A+E +N+H R+AL I L +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K+ K++VL + Y+ +GG+ TL Sbjct: 62 VLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSK---ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTL 219
BLAST of CK938672 vs. ExPASy Swiss-Prot
Match: SDCS_STAAR (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MRSA252) GN=sdcS PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.209e-27 Identity = 61/161 (37.89%), Postives = 98/161 (60.87%), Query Frame = 1 Query: 265 MLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRKYCKAVVLGVIYSAAVGGMSTL 738 +L + W+ WW+TEA+P+ TS+ P+ L PL I + + V+ Y +D+I L LG FILA+A+E +N+H R+AL I L +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K+ K++VL + Y+ +GG+ TL Sbjct: 62 VLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSK---ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTL 219
BLAST of CK938672 vs. ExPASy Swiss-Prot
Match: SDCS_STAAN (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain N315) GN=sdcS PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.209e-27 Identity = 61/161 (37.89%), Postives = 98/161 (60.87%), Query Frame = 1 Query: 265 MLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRKYCKAVVLGVIYSAAVGGMSTL 738 +L + W+ WW+TEA+P+ TS+ P+ L PL I + + V+ Y +D+I L LG FILA+A+E +N+H R+AL I L +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K+ K++VL + Y+ +GG+ TL Sbjct: 62 VLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSK---ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTL 219
BLAST of CK938672 vs. ExPASy Swiss-Prot
Match: SDCS_STAAM (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sdcS PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.209e-27 Identity = 61/161 (37.89%), Postives = 98/161 (60.87%), Query Frame = 1 Query: 265 MLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRKYCKAVVLGVIYSAAVGGMSTL 738 +L + W+ WW+TEA+P+ TS+ P+ L PL I + + V+ Y +D+I L LG FILA+A+E +N+H R+AL I L +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K+ K++VL + Y+ +GG+ TL Sbjct: 62 VLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSK---ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTL 219
BLAST of CK938672 vs. ExPASy Swiss-Prot
Match: SDCS_STAAC (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain COL) GN=sdcS PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.209e-27 Identity = 61/161 (37.89%), Postives = 98/161 (60.87%), Query Frame = 1 Query: 265 MLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRKYCKAVVLGVIYSAAVGGMSTL 738 +L + W+ WW+TEA+P+ TS+ P+ L PL I + + V+ Y +D+I L LG FILA+A+E +N+H R+AL I L +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K+ K++VL + Y+ +GG+ TL Sbjct: 62 VLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSK---ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTL 219
BLAST of CK938672 vs. ExPASy Swiss-Prot
Match: SDCS_STAAB (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=sdcS PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.209e-27 Identity = 61/161 (37.89%), Postives = 98/161 (60.87%), Query Frame = 1 Query: 265 MLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRKYCKAVVLGVIYSAAVGGMSTL 738 +L + W+ WW+TEA+P+ TS+ P+ L PL I + + V+ Y +D+I L LG FILA+A+E +N+H R+AL I L +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K+ K++VL + Y+ +GG+ TL Sbjct: 62 VLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSK---ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTL 219
BLAST of CK938672 vs. ExPASy Swiss-Prot
Match: SDCS_STAA8 (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain NCTC 8325) GN=sdcS PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.209e-27 Identity = 61/161 (37.89%), Postives = 98/161 (60.87%), Query Frame = 1 Query: 265 MLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRKYCKAVVLGVIYSAAVGGMSTL 738 +L + W+ WW+TEA+P+ TS+ P+ L PL I + + V+ Y +D+I L LG FILA+A+E +N+H R+AL I L +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K+ K++VL + Y+ +GG+ TL Sbjct: 62 VLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSK---ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTL 219
BLAST of CK938672 vs. ExPASy Swiss-Prot
Match: SDCS_STAA3 (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain USA300) GN=sdcS PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.209e-27 Identity = 61/161 (37.89%), Postives = 98/161 (60.87%), Query Frame = 1 Query: 265 MLGVLAWVFAWWLTEAVPMPITSMAPLFLFPLFGISSADTVAHSYMDDVIALVLGSFILALAVEHYNIHKRLALNITILFCGEPMNPPLLLLGICGTTAFVSMWMHNVAAAVIMMPVATGILQ---NLPEVPLQSTLVRKYCKAVVLGVIYSAAVGGMSTL 738 +L + W+ WW+TEA+P+ TS+ P+ L PL I + + V+ Y +D+I L LG FILA+A+E +N+H R+AL I L +LLG T F+SM++ N AA +IM+P+ I++ +L E T ++K+ K++VL + Y+ +GG+ TL Sbjct: 62 VLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSK---ILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTL 219 The following BLAST results are available for this feature:
BLAST of CK938672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938672 ID=CK938672; Name=CK938672; organism=Citrus sinensis; type=EST; length=739bpback to top |