FC921792
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921792 vs. ExPASy Swiss-Prot
Match: IDH3_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial OS=Arabidopsis thaliana GN=IDH3 PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 1.210e-45 Identity = 88/121 (72.73%), Postives = 107/121 (88.43%), Query Frame = 3 Query: 9 RSLPILKQILSKSSDQCSPFLTPTRSVTYMPRPGDGAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEVHGDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNMQLRRELD 371 RS+ I ++L+ SPF + +RS+TYMPRPGDGAPR VTL+PGDGIGPLVTGAVEQVMEAMHAPV+FE+ EV G+M++VPEEVI+S+K+NKVCL+GGLATP+GGGVSSLNMQLR+ELD Sbjct: 4 RSVSIFNRLLANPP---SPFTSLSRSITYMPRPGDGAPRTVTLIPGDGIGPLVTGAVEQVMEAMHAPVHFERYEVLGNMRKVPEEVIESVKRNKVCLKGGLATPVGGGVSSLNMQLRKELD 121
BLAST of FC921792 vs. ExPASy Swiss-Prot
Match: IDH1_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial OS=Arabidopsis thaliana GN=IDH1 PE=1 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 8.671e-44 Identity = 86/121 (71.07%), Postives = 102/121 (84.30%), Query Frame = 3 Query: 9 RSLPILKQILSKSSDQCSPFLTPTRSVTYMPRPGDGAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEVHGDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNMQLRRELD 371 RSL +LK + ++ TRSVTYMPRPGDGAPRAVTL+PGDGIGPLVT AVEQVMEAMHAP++FEK +VHG+M RVP EV++SI+KNKVCL+GGL TP+GGGVSSLN+QLR+ELD Sbjct: 4 RSLTLLKNLARNANGSG----IQTRSVTYMPRPGDGAPRAVTLIPGDGIGPLVTNAVEQVMEAMHAPIFFEKYDVHGEMSRVPPEVMESIRKNKVCLKGGLKTPVGGGVSSLNVQLRKELD 120
BLAST of FC921792 vs. ExPASy Swiss-Prot
Match: IDH2_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial OS=Arabidopsis thaliana GN=IDH2 PE=1 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 1.808e-41 Identity = 83/121 (68.60%), Postives = 98/121 (80.99%), Query Frame = 3 Query: 9 RSLPILKQILSKSSDQCSPFLTPTRSVTYMPRPGDGAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEVHGDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNMQLRRELD 371 +S +LK + S +S TRSVTYMPRPGDG PR VTL+PGDG+GPLVT AV+QVMEAMHAPVYFE EVHGDMK +PE +++SIKKNKVCL+GGL TP+GGGVSSLN+ LR+ELD Sbjct: 4 QSFSLLKNLRSIASGS----KIQTRSVTYMPRPGDGKPRPVTLIPGDGVGPLVTNAVQQVMEAMHAPVYFEPFEVHGDMKSLPEGLLESIKKNKVCLKGGLKTPVGGGVSSLNVNLRKELD 120
BLAST of FC921792 vs. ExPASy Swiss-Prot
Match: IDH2_SCHPO (Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial OS=Schizosaccharomyces pombe GN=idh2 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.350e-12 Identity = 34/82 (41.46%), Postives = 57/82 (69.51%), Query Frame = 3 Query: 129 VTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEVHGDMKR----VPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNMQLRR 362 VT++ GDGIGP + +VE++ +A P+ +E+ +V+ +K +P++ +S++KNKV L+G LATP+G G S+N+ LRR Sbjct: 48 VTMIAGDGIGPEIAQSVERIFKAAKVPIEWERVKVYPILKNGTTTIPDDAKESVRKNKVALKGPLATPIGKGHVSMNLTLRR 129
BLAST of FC921792 vs. ExPASy Swiss-Prot
Match: IDHA_DICDI (Isocitrate dehydrogenase [NAD] regulatory subunit A, mitochondrial OS=Dictyostelium discoideum GN=idhA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.303e-12 Identity = 36/78 (46.15%), Postives = 56/78 (71.79%), Query Frame = 3 Query: 129 VTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEVHGDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNMQLRR 362 VTL+PGDGIGP ++ +V++V A+ AP+ +E V + + +EVI+SI KNK+ L+G ++TP+G G SLN+ LR+ Sbjct: 26 VTLIPGDGIGPEISESVKRVFSAVKAPIEWETVVVDANTG-ISKEVIESISKNKIGLKGPISTPIGTGHQSLNLGLRK 102
BLAST of FC921792 vs. ExPASy Swiss-Prot
Match: IDH3A_CAEEL (Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Caenorhabditis elegans GN=F43G9.1 PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 3.928e-12 Identity = 37/93 (39.78%), Postives = 57/93 (61.29%), Query Frame = 3 Query: 102 RPGDGAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEV-----HGDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNMQLRRE 365 R G R VTL+PGDGIGP ++ +V+++ EA AP+ ++ +V + R+P I+ + NKV L+G L TP+G G SLN+ +R+E Sbjct: 18 RYSSGDVRRVTLIPGDGIGPEISASVQKIFEAADAPIAWDPVDVTPVKGRDGVFRIPSRCIELMHANKVGLKGPLETPIGKGHRSLNLAVRKE 110
BLAST of FC921792 vs. ExPASy Swiss-Prot
Match: IDH2_YEAST (Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial OS=Saccharomyces cerevisiae GN=IDH2 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.701e-12 Identity = 36/95 (37.89%), Postives = 57/95 (60.00%), Query Frame = 3 Query: 90 TYMPRPGDGAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEVH----GDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNMQLRR 362 T P P G V+ + GDGIGP ++ +V+++ A + P+ +E C+V + +P+ ++SI KN V L+G LATP+G G SLN+ LR+ Sbjct: 27 TGKPNPSTGK-YTVSFIEGDGIGPEISKSVKKIFSAANVPIEWESCDVSPIFVNGLTTIPDPAVQSITKNLVALKGPLATPIGKGHRSLNLTLRK 120
BLAST of FC921792 vs. ExPASy Swiss-Prot
Match: IDH3A_PONAB (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Pongo abelii GN=IDH3A PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.752e-12 Identity = 42/117 (35.90%), Postives = 64/117 (54.70%), Query Frame = 3 Query: 36 LSKSSDQCSPFLTPTRSVTYMPRPGDGAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEV-----HGDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNMQLRRELD 371 +SK S F P + + R G + VTL+PGDGIGP ++ AV ++ +A AP+ +E+ V G +P E +S+ KNK+ L+G L TP+ G S+N+ LR+ D Sbjct: 7 ISKVSRLLGAFHNPKQ----VTRGFTGGVQTVTLIPGDGIGPEISAAVMKIFDAAKAPIQWEERNVTAIQGPGGKWMIPSEAKESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFD 119
BLAST of FC921792 vs. ExPASy Swiss-Prot
Match: IDH3A_HUMAN (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Homo sapiens GN=IDH3A PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.752e-12 Identity = 42/117 (35.90%), Postives = 64/117 (54.70%), Query Frame = 3 Query: 36 LSKSSDQCSPFLTPTRSVTYMPRPGDGAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEV-----HGDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNMQLRRELD 371 +SK S F P + + R G + VTL+PGDGIGP ++ AV ++ +A AP+ +E+ V G +P E +S+ KNK+ L+G L TP+ G S+N+ LR+ D Sbjct: 7 ISKVSRLLGAFHNPKQ----VTRGFTGGVQTVTLIPGDGIGPEISAAVMKIFDAAKAPIQWEERNVTAIQGPGGKWMIPSEAKESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFD 119
BLAST of FC921792 vs. ExPASy Swiss-Prot
Match: IDH3A_MACFA (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (Fragment) OS=Macaca fascicularis GN=IDH3A PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11 Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 114 GAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEV-----HGDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNMQLRRELD 371 G + VTL+PGDGIGP ++ AV ++ +A AP+ +E+ V G +P E +S+ KNK+ L+G L TP+ G S+N+ LR+ D Sbjct: 10 GGVQTVTLIPGDGIGPEISAAVMKIFDAAKAPIQWEERNVTAIQGPGGKWMIPSEAKESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFD 100 The following BLAST results are available for this feature:
BLAST of FC921792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921792 ID=FC921792; Name=FC921792; organism=Citrus sinensis; type=EST; length=373bpback to top |