FC921784
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921784 vs. ExPASy Swiss-Prot
Match: IDH3_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial OS=Arabidopsis thaliana GN=IDH3 PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 4.598e-45 Identity = 87/122 (71.31%), Postives = 107/122 (87.70%), Query Frame = 3 Query: 6 RRSLPILKQILSKSSDQCSPFLTPTRSVTYMPRPGDGAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEVHGDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNLLLRRELD 371 RRS+ I ++L+ SPF + +RS+TYMPRPGDGAPR VTL+PGDGIGPLVTGAVEQVMEAMHAPV+FE+ EV G+M++VPEEVI+S+K+NKVCL+GGLATP+GGGVSSLN+ LR+ELD Sbjct: 3 RRSVSIFNRLLANPP---SPFTSLSRSITYMPRPGDGAPRTVTLIPGDGIGPLVTGAVEQVMEAMHAPVHFERYEVLGNMRKVPEEVIESVKRNKVCLKGGLATPVGGGVSSLNMQLRKELD 121
BLAST of FC921784 vs. ExPASy Swiss-Prot
Match: IDH1_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial OS=Arabidopsis thaliana GN=IDH1 PE=1 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 1.479e-43 Identity = 86/122 (70.49%), Postives = 102/122 (83.61%), Query Frame = 3 Query: 6 RRSLPILKQILSKSSDQCSPFLTPTRSVTYMPRPGDGAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEVHGDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNLLLRRELD 371 RRSL +LK + ++ TRSVTYMPRPGDGAPRAVTL+PGDGIGPLVT AVEQVMEAMHAP++FEK +VHG+M RVP EV++SI+KNKVCL+GGL TP+GGGVSSLN+ LR+ELD Sbjct: 3 RRSLTLLKNLARNANGSG----IQTRSVTYMPRPGDGAPRAVTLIPGDGIGPLVTNAVEQVMEAMHAPIFFEKYDVHGEMSRVPPEVMESIRKNKVCLKGGLKTPVGGGVSSLNVQLRKELD 120
BLAST of FC921784 vs. ExPASy Swiss-Prot
Match: IDH2_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial OS=Arabidopsis thaliana GN=IDH2 PE=1 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 1.060e-41 Identity = 84/122 (68.85%), Postives = 99/122 (81.15%), Query Frame = 3 Query: 6 RRSLPILKQILSKSSDQCSPFLTPTRSVTYMPRPGDGAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEVHGDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNLLLRRELD 371 R+S +LK + S +S TRSVTYMPRPGDG PR VTL+PGDG+GPLVT AV+QVMEAMHAPVYFE EVHGDMK +PE +++SIKKNKVCL+GGL TP+GGGVSSLN+ LR+ELD Sbjct: 3 RQSFSLLKNLRSIASGS----KIQTRSVTYMPRPGDGKPRPVTLIPGDGVGPLVTNAVQQVMEAMHAPVYFEPFEVHGDMKSLPEGLLESIKKNKVCLKGGLKTPVGGGVSSLNVNLRKELD 120
BLAST of FC921784 vs. ExPASy Swiss-Prot
Match: IDH2_SCHPO (Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial OS=Schizosaccharomyces pombe GN=idh2 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.916e-13 Identity = 35/82 (42.68%), Postives = 57/82 (69.51%), Query Frame = 3 Query: 129 VTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEVHGDMKR----VPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNLLLRR 362 VT++ GDGIGP + +VE++ +A P+ +E+ +V+ +K +P++ +S++KNKV L+G LATP+G G S+NL LRR Sbjct: 48 VTMIAGDGIGPEIAQSVERIFKAAKVPIEWERVKVYPILKNGTTTIPDDAKESVRKNKVALKGPLATPIGKGHVSMNLTLRR 129
BLAST of FC921784 vs. ExPASy Swiss-Prot
Match: IDH3A_PONAB (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Pongo abelii GN=IDH3A PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.034e-12 Identity = 44/117 (37.61%), Postives = 65/117 (55.56%), Query Frame = 3 Query: 36 LSKSSDQCSPFLTPTRSVTYMPRPGDGAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEV-----HGDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNLLLRRELD 371 +SK S F P + + R G + VTL+PGDGIGP ++ AV ++ +A AP+ +E+ V G +P E +S+ KNK+ L+G L TP+ G S+NLLLR+ D Sbjct: 7 ISKVSRLLGAFHNPKQ----VTRGFTGGVQTVTLIPGDGIGPEISAAVMKIFDAAKAPIQWEERNVTAIQGPGGKWMIPSEAKESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFD 119
BLAST of FC921784 vs. ExPASy Swiss-Prot
Match: IDH3A_HUMAN (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Homo sapiens GN=IDH3A PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.034e-12 Identity = 44/117 (37.61%), Postives = 65/117 (55.56%), Query Frame = 3 Query: 36 LSKSSDQCSPFLTPTRSVTYMPRPGDGAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEV-----HGDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNLLLRRELD 371 +SK S F P + + R G + VTL+PGDGIGP ++ AV ++ +A AP+ +E+ V G +P E +S+ KNK+ L+G L TP+ G S+NLLLR+ D Sbjct: 7 ISKVSRLLGAFHNPKQ----VTRGFTGGVQTVTLIPGDGIGPEISAAVMKIFDAAKAPIQWEERNVTAIQGPGGKWMIPSEAKESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFD 119
BLAST of FC921784 vs. ExPASy Swiss-Prot
Match: IDH3A_MACFA (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (Fragment) OS=Macaca fascicularis GN=IDH3A PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.350e-12 Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 3 Query: 114 GAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEV-----HGDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNLLLRRELD 371 G + VTL+PGDGIGP ++ AV ++ +A AP+ +E+ V G +P E +S+ KNK+ L+G L TP+ G S+NLLLR+ D Sbjct: 10 GGVQTVTLIPGDGIGPEISAAVMKIFDAAKAPIQWEERNVTAIQGPGGKWMIPSEAKESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFD 100
BLAST of FC921784 vs. ExPASy Swiss-Prot
Match: IDH3A_BOVIN (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Bos taurus GN=IDH3A PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.350e-12 Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 3 Query: 114 GAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEV-----HGDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNLLLRRELD 371 G + VTL+PGDGIGP ++ AV ++ +A AP+ +E+ V G +P E +S+ KNK+ L+G L TP+ G S+NLLLR+ D Sbjct: 29 GGVKTVTLIPGDGIGPEISAAVMKIFDAAKAPIQWEERNVAAIQGPGGKWMIPPEAKESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFD 119
BLAST of FC921784 vs. ExPASy Swiss-Prot
Match: IDHA_DICDI (Isocitrate dehydrogenase [NAD] regulatory subunit A, mitochondrial OS=Dictyostelium discoideum GN=idhA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.303e-12 Identity = 37/78 (47.44%), Postives = 56/78 (71.79%), Query Frame = 3 Query: 129 VTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEVHGDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNLLLRR 362 VTL+PGDGIGP ++ +V++V A+ AP+ +E V + + +EVI+SI KNK+ L+G ++TP+G G SLNL LR+ Sbjct: 26 VTLIPGDGIGPEISESVKRVFSAVKAPIEWETVVVDANTG-ISKEVIESISKNKIGLKGPISTPIGTGHQSLNLGLRK 102
BLAST of FC921784 vs. ExPASy Swiss-Prot
Match: IDH3A_CAEEL (Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Caenorhabditis elegans GN=F43G9.1 PE=1 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 2.303e-12 Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = 3 Query: 102 RPGDGAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEV-----HGDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNLLLRRE 365 R G R VTL+PGDGIGP ++ +V+++ EA AP+ ++ +V + R+P I+ + NKV L+G L TP+G G SLNL +R+E Sbjct: 18 RYSSGDVRRVTLIPGDGIGPEISASVQKIFEAADAPIAWDPVDVTPVKGRDGVFRIPSRCIELMHANKVGLKGPLETPIGKGHRSLNLAVRKE 110 The following BLAST results are available for this feature:
BLAST of FC921784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921784 ID=FC921784; Name=FC921784; organism=Citrus sinensis; type=EST; length=373bpback to top |