CK937794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937794 vs. ExPASy Swiss-Prot
Match: FNTA_PEA (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Pisum sativum GN=FTA PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.836e-28 Identity = 58/88 (65.91%), Postives = 69/88 (78.41%), Query Frame = 1 Query: 517 GDEQQQEAERLPLSQRPEWSDVTPIPQDDGPNPVVPIAYKPEFSETMSYFRAVYYSNERSSRSFQLTKEAICLNPGNYTVWHFRXXII 780 G+ + +E +R+PL RPEWSDVTPIPQDDGP+PVVPI Y EFSE M YFRAVY++ E SSR+ LT EAI LN GNYTVWHFR ++ Sbjct: 3 GNIEVEEDDRVPLRLRPEWSDVTPIPQDDGPSPVVPINYSEEFSEVMDYFRAVYFAKELSSRALALTAEAIGLNAGNYTVWHFRRLLL 90
BLAST of CK937794 vs. ExPASy Swiss-Prot
Match: FNTA_ARATH (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Arabidopsis thaliana GN=FTA PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.090e-28 Identity = 55/80 (68.75%), Postives = 66/80 (82.50%), Query Frame = 1 Query: 541 ERLPLSQRPEWSDVTPIPQDDGPNPVVPIAYKPEFSETMSYFRAVYYSNERSSRSFQLTKEAICLNPGNYTVWHFRXXII 780 E +PLSQR EWSDV P+ QDDGPNPVVPIAYK EF ETM YFRA+Y+S+ERS R+ +LT+E + LN GNYTVWHFR ++ Sbjct: 19 ETVPLSQRLEWSDVVPLTQDDGPNPVVPIAYKEEFRETMDYFRAIYFSDERSPRALRLTEETLLLNSGNYTVWHFRRLVL 98
BLAST of CK937794 vs. ExPASy Swiss-Prot
Match: FNTA_SOLLC (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Solanum lycopersicum GN=FTA PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.906e-27 Identity = 52/79 (65.82%), Postives = 65/79 (82.28%), Query Frame = 1 Query: 544 RLPLSQRPEWSDVTPIPQDDGPNPVVPIAYKPEFSETMSYFRAVYYSNERSSRSFQLTKEAICLNPGNYTVWHFRXXII 780 R+P +RP+W+DV P+PQDDGP PVVPIAY +FSETM YFRA+Y ++ERS+R+ QLT EAI LNPGNYTVW FR ++ Sbjct: 10 RIPFKERPDWADVKPVPQDDGPCPVVPIAYTEDFSETMDYFRAIYVADERSTRALQLTGEAIQLNPGNYTVWQFRRVVL 88
BLAST of CK937794 vs. ExPASy Swiss-Prot
Match: FNTA_BOVIN (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Bos taurus GN=FNTA PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.840e-20 Identity = 42/73 (57.53%), Postives = 55/73 (75.34%), Query Frame = 1 Query: 562 RPEWSDVTPIPQDDGPNPVVPIAYKPEFSETMSYFRAVYYSNERSSRSFQLTKEAICLNPGNYTVWHFRXXII 780 RPEW+D+ P+PQ+DGPNPVV I Y +F + YFRAV +ERS R+F+LT++AI LN NYTVWHFR ++ Sbjct: 65 RPEWADIDPVPQNDGPNPVVQIIYSEKFQDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLL 137
BLAST of CK937794 vs. ExPASy Swiss-Prot
Match: FNTA_HUMAN (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Homo sapiens GN=FNTA PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.133e-20 Identity = 46/111 (41.44%), Postives = 65/111 (58.56%), Query Frame = 1 Query: 448 HRDQRRKREGSVLARTTKMESDEGDEQQQEAERLPLSQRPEWSDVTPIPQDDGPNPVVPIAYKPEFSETMSYFRAVYYSNERSSRSFQLTKEAICLNPGNYTVWHFRXXII 780 H+++ G +A D+G + R EW+D+ P+PQ+DGPNPVV I Y +F + YFRAV +ERS R+F+LT++AI LN NYTVWHFR ++ Sbjct: 35 HKEEMAAEAGEAVASPM----DDGFVSLDSPSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLL 141
BLAST of CK937794 vs. ExPASy Swiss-Prot
Match: FNTA_MOUSE (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Mus musculus GN=Fnta PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.035e-19 Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 1 Query: 562 RPEWSDVTPIPQDDGPNPVVPIAYKPEFSETMSYFRAVYYSNERSSRSFQLTKEAICLNPGNYTVWHFRXXII 780 R EW+D+ P+PQ+DGPNPVV I Y +F + YFRAV +ERS R+F+LT++AI LN NYTVWHFR ++ Sbjct: 69 RAEWADIDPVPQNDGPNPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLL 141
BLAST of CK937794 vs. ExPASy Swiss-Prot
Match: FNTA_RAT (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Rattus norvegicus GN=Fnta PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.731e-19 Identity = 40/73 (54.79%), Postives = 54/73 (73.97%), Query Frame = 1 Query: 562 RPEWSDVTPIPQDDGPNPVVPIAYKPEFSETMSYFRAVYYSNERSSRSFQLTKEAICLNPGNYTVWHFRXXII 780 R EW+D+ P+PQ+DGP+PVV I Y +F + YFRAV +ERS R+F+LT++AI LN NYTVWHFR ++ Sbjct: 69 RAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLL 141
BLAST of CK937794 vs. ExPASy Swiss-Prot
Match: FNTA_DICDI (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Dictyostelium discoideum GN=fntA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.731e-19 Identity = 43/93 (46.24%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 502 MESDEGDEQQQEAERLPLSQRPEWSDVTPIPQDDGPNPVVPIAYKPEFSETMSYFRAVYYSNERSSRSFQLTKEAICLNPGNYTVWHFRXXII 780 M S E D+ +P S+RPEWSDV P+ QDDGP+P+ PI Y F + M+YFRA+ S E+S R L +E I NP NYT+W++R ++ Sbjct: 1 MSSSEEDDGY-----VPFSKRPEWSDVKPLAQDDGPHPICPILYSEVFKDKMNYFRAILKSKEKSLRVLDLLEEVIQENPSNYTIWYYRREVL 88
BLAST of CK937794 vs. ExPASy Swiss-Prot
Match: FNTA_SCHPO (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Schizosaccharomyces pombe GN=cwp1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.663e-11 Identity = 32/71 (45.07%), Postives = 43/71 (60.56%), Query Frame = 1 Query: 568 EWSDVTPIPQDDGPNPVVPIAYKPEFSETMSYFRAVYYSNERSSRSFQLTKEAICLNPGNYTVWHFRXXII 780 E+ +TPIPQDDG NP+ I Y + + M+YFRA+ E S R+ LT I NP +YTVW +R I+ Sbjct: 16 EYGPLTPIPQDDGENPLAKICYTTGYEQGMAYFRAIMAKKEYSLRALNLTGFLIMNNPAHYTVWAYRFQIL 86 The following BLAST results are available for this feature:
BLAST of CK937794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK937794 ID=CK937794; Name=CK937794; organism=Citrus sinensis; type=EST; length=780bpback to top |