CK937778
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937778 vs. ExPASy Swiss-Prot
Match: NIFU4_ARATH (NifU-like protein 4, mitochondrial OS=Arabidopsis thaliana GN=NIFU4 PE=2 SV=1) HSP 1 Score: 343.584 bits (880), Expect = 7.670e-94 Identity = 172/224 (76.79%), Postives = 192/224 (85.71%), Query Frame = 1 Query: 133 SRTLSYLSNPITSQNSTLLKSIP-LSSSVQSGKWNLFRVQRRTMFIQTQPTPNPSSLMFYPGKPVMEVGSADFPNARAAMNSPLAKSLYGVDGITRVFFGSVFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVXLKSGIENMLMHYVPEV 801 SR ++S + T ++P L+SS+ + KWN QRRTMFIQTQ TPNPSSLMFYPGKPVMEVGSADFPN R+A+ SPLAKS+Y +DG+ RVFFGS F+TVTKS+D SWD+LKPEIFAA+MDFYSSGQPLFLDS+ AAAKDTAI+EDDSETVAMIKELLETRIRPAVQDDGGDIEY GFDPE+G VKLRMQGACSGCPSSSV LKSGIENMLMHYV EV Sbjct: 37 SRRSLFISATNLLNSRTKDSALPSLNSSLLAQKWNFLGGQRRTMFIQTQSTPNPSSLMFYPGKPVMEVGSADFPNVRSALGSPLAKSIYSIDGVVRVFFGSDFVTVTKSDDVSWDILKPEIFAAVMDFYSSGQPLFLDSQAAAAKDTAISEDDSETVAMIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEV 260
BLAST of CK937778 vs. ExPASy Swiss-Prot
Match: NIFU5_ARATH (NifU-like protein 5, mitochondrial OS=Arabidopsis thaliana GN=NIFU5 PE=2 SV=1) HSP 1 Score: 318.546 bits (815), Expect = 2.642e-86 Identity = 152/185 (82.16%), Postives = 171/185 (92.43%), Query Frame = 1 Query: 247 QRRTMFIQTQPTPNPSSLMFYPGKPVMEVGSADFPNARAAMNSPLAKSLYGVDGITRVFFGSVFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVXLKSGIENMLMHYVPEV 801 QRRTMFIQTQ TPNPSSLMF PGKPVME+GSADFPN+R+AM+SPLAK+++ +DG+ RVF+GS F+TVTKS+D +WD+LKP+IFA +MDFYSSGQPLFLDS+ AAKDTAI+EDDSETVAMIKELLETRIRP+VQDDGGDIEY GFD ETG VKLRMQGACSGCPSSSV LKSGIENMLMHYV EV Sbjct: 71 QRRTMFIQTQSTPNPSSLMFSPGKPVMEIGSADFPNSRSAMSSPLAKAIFAIDGVVRVFYGSDFVTVTKSDDVTWDILKPDIFAVVMDFYSSGQPLFLDSQATAAKDTAIHEDDSETVAMIKELLETRIRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEV 255
BLAST of CK937778 vs. ExPASy Swiss-Prot
Match: NFU1_DROME (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila melanogaster GN=CG32500 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.721e-56 Identity = 110/185 (59.46%), Postives = 137/185 (74.05%), Query Frame = 1 Query: 250 RRTMFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSVFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVXLKSGIENMLMHYVPEV 801 RR+MFIQTQ TPNP SL F PG V+ G+ DFPN A NSPLAK L+ V+G+ VFFG+ F+T++K E W L+KPE+FA IMDF++SG P+ D++ A DT I EDD ETV MIKELL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS V LK+G++NML Y+PEV Sbjct: 64 RRSMFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPNGTTAHNSPLAKLLFRVEGVKGVFFGADFVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPNA--DTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGY--EGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEV 244
BLAST of CK937778 vs. ExPASy Swiss-Prot
Match: NFU1_DROSE (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila sechellia GN=GM13534 PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 6.347e-56 Identity = 110/185 (59.46%), Postives = 137/185 (74.05%), Query Frame = 1 Query: 250 RRTMFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSVFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVXLKSGIENMLMHYVPEV 801 RR+MFIQTQ TPNP SL F PG V+ G+ DFPN A +SPLAK L+ V+G+ VFFG+ FIT++K E W L+KPE+FA IMDF++SG P+ D++ A DT I EDD ETV MIKELL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS V LK+G++NML Y+PEV Sbjct: 64 RRSMFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFFGADFITISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPNA--DTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEV 244
BLAST of CK937778 vs. ExPASy Swiss-Prot
Match: NFU1_MOUSE (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Mus musculus GN=Nfu1 PE=1 SV=2) HSP 1 Score: 217.238 bits (552), Expect = 8.290e-56 Identity = 109/184 (59.24%), Postives = 138/184 (75.00%), Query Frame = 1 Query: 253 RTMFIQTQPTPNPSSLMFYPGKPVMEVGSADFPNARAAMNSPLAKSLYGVDGITRVFFGSVFITVTK-SEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVXLKSGIENMLMHYVPEV 801 R MFIQTQ TPNP+SL F PGKPV+E + DFP AA SPLA+ L+ ++G+ VFFG FITVTK +E+ W+LLKP+I+A IMDF++SG PL + ET A +E+D E VAMIKELL+TRIRP VQ+DGGD+ YRGF E G V+L++QG+C+ CPSS + LKSGI+NML Y+PEV Sbjct: 55 RFMFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMDFFASGLPL-VTEETPPPPGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYRGF--EDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPEV 235
BLAST of CK937778 vs. ExPASy Swiss-Prot
Match: NFU1_DROYA (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila yakuba GN=GE15286 PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 8.290e-56 Identity = 109/185 (58.92%), Postives = 137/185 (74.05%), Query Frame = 1 Query: 250 RRTMFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSVFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVXLKSGIENMLMHYVPEV 801 RR+MFIQTQ TPNP SL F PG V+ G+ DFPN A +SPLAK L+ V+G+ VFFG+ F+T++K E W L+KPE+FA IMDF++SG P+ D++ A DT I EDD ETV MIKELL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS V LK+G++NML Y+PEV Sbjct: 64 RRSMFIQTQDTPNPDSLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFFGADFVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLHDAQPNA--DTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEV 244
BLAST of CK937778 vs. ExPASy Swiss-Prot
Match: NFU1_DROER (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila erecta GN=GG17526 PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 8.290e-56 Identity = 109/185 (58.92%), Postives = 137/185 (74.05%), Query Frame = 1 Query: 250 RRTMFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSVFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVXLKSGIENMLMHYVPEV 801 RR+MFIQTQ TPNP SL F PG V+ G+ DFPN A +SPLAK L+ V+G+ VFFG+ F+T++K E W L+KPE+FA IMDF++SG P+ D++ A DT I EDD ETV MIKELL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS V LK+G++NML Y+PEV Sbjct: 64 RRSMFIQTQDTPNPDSLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFFGADFVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLHDAQPNA--DTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEV 244
BLAST of CK937778 vs. ExPASy Swiss-Prot
Match: NFU1_DROSI (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila simulans GN=GD15490 PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.412e-55 Identity = 109/185 (58.92%), Postives = 137/185 (74.05%), Query Frame = 1 Query: 250 RRTMFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSVFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVXLKSGIENMLMHYVPEV 801 RR+MFIQTQ TPNP SL F PG V+ G+ DFP+ A +SPLAK L+ V+G+ VFFG+ FIT++K E W L+KPE+FA IMDF++SG P+ D++ A DT I EDD ETV MIKELL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS V LK+G++NML Y+PEV Sbjct: 64 RRSMFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPHGTTAHSSPLAKLLFRVEGVKGVFFGADFITISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPNA--DTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEV 244
BLAST of CK937778 vs. ExPASy Swiss-Prot
Match: NFU1_DROWI (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila willistoni GN=GK25604 PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.150e-55 Identity = 117/224 (52.23%), Postives = 154/224 (68.75%), Query Frame = 1 Query: 133 SRTLSYLSNPITSQNSTLLKSIPLSSSVQSGKWNLFRVQRRTMFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSVFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVXLKSGIENMLMHYVPEV 801 SR +L++ + +Q+S + S P + S+ + + +RTMFIQTQ TPNP SL F PG V+ G+ DFP+ AA SPLAK L+ V+G+ VFFGS FIT++K E W L+KPE+FA IMDF++SG P+ ++ A DT I EDD ETV MIKELL+TRIRP VQ+DGGDI + +D G VKL+MQG+CS CPSS V LK+G++NML Y+PEV Sbjct: 33 SRGFVHLTSSV-AQSSAIHVSTPSTPSL------MLIMGKRTMFIQTQDTPNPESLKFLPGVEVLGKGNTYDFPSVAAAHCSPLAKLLFRVEGVRSVFFGSDFITISKEEAAEWGLIKPEVFAVIMDFFASGLPILHEARNNA--DTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMSYD--NGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEV 245
BLAST of CK937778 vs. ExPASy Swiss-Prot
Match: NFU1_DROGR (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila grimshawi GN=GH17809 PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.114e-55 Identity = 118/223 (52.91%), Postives = 152/223 (68.16%), Query Frame = 1 Query: 136 RTLSYLSNPITSQNSTLLKSIPLSSSVQSGKWNLFRVQRRTMFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSVFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVXLKSGIENMLMHYVPEV 801 +T S L+ +T Q L K PL + ++ +R+MFIQTQ TPNP SL F PG V+ G+ DFP+A AA SPLAK L+ V+G+ VFFGS FIT++K E+ W L+KPE+FA IMDF++SG P+ ++ A DT I EDD ETV MIKELL+TRIRP VQ+DGGDI + + E G VKL+MQG+CS CPSS V LK+G++NML Y+PEV Sbjct: 47 KTYSTLAVDLTKQQMLLRK--PLETLA-------LQITKRSMFIQTQDTPNPDSLKFLPGVEVLGKGNTYDFPSATAAHCSPLAKLLFRVEGVRAVFFGSDFITISKEENGEWGLIKPEVFAVIMDFFASGLPILHEARPNA--DTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFISY--EKGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEV 256 The following BLAST results are available for this feature:
BLAST of CK937778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937778 ID=CK937778; Name=CK937778; organism=Citrus sinensis; type=EST; length=801bpback to top |