CK937076
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937076 vs. ExPASy Swiss-Prot
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.226e-17 Identity = 63/164 (38.41%), Postives = 81/164 (49.39%), Query Frame = 1 Query: 139 LNLKLGGNSLSTSRDPDSPARPTTAK-VFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRM-------------------MTMMGLPVH----TNMV--RSLGVRAHSLVHKPSRDGAGVG------ARFNDADTGFGMAWTPYVLEEATDVMWPGSFR 534 L L L S S++ + +P+ +K VFSCN+C RKF+SSQALGGHQNAHKRER AKR + + LP+H NM R+LG+RAHS H S ARFN FG YV ++ +++WPGSFR Sbjct: 57 LTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQG--YFGNCIPFYVEDDEAEMLWPGSFR 218
BLAST of CK937076 vs. ExPASy Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.945e-16 Identity = 48/108 (44.44%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 160 NSLSTSRDPDSPARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRM--------------------MTMMGLPVH--TNMVRSLGVRAHSLVHKPS 417 +S STS + +VFSCN+C RKF+SSQALGGHQNAHKRER AKR Q +M +M LP+H N +LG++AHS +HKPS Sbjct: 48 SSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPS 155
BLAST of CK937076 vs. ExPASy Swiss-Prot
Match: ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.943e-15 Identity = 55/136 (40.44%), Postives = 71/136 (52.21%), Query Frame = 1 Query: 139 LNLKLGGNSLSTSRDPDSPARPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMGLPVHTNMVRSLGVRAHS-LVHKPSRDGAGVGARFNDADTGFGMAWTPYVL---EEATDVMWPGSFR 534 L+LKL ++ A P +VFSCN+C RKF+SSQALGGHQNAHKRER AKR M +T SLG++AHS L+H + +RF+ G+ P + +D WPGSFR Sbjct: 35 LDLKLNDTFNDDTKSTKCEANP---RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSSSLGMQAHSGLLHHTLSQPQPLVSRFH--HQGYFGNTVPLFFDYDDGGSDFFWPGSFR 165
BLAST of CK937076 vs. ExPASy Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.712e-14 Identity = 45/83 (54.22%), Postives = 51/83 (61.45%), Query Frame = 1 Query: 205 TTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSQRMMTMMG----------LPVH--TNMVRSLGVRAHSLVHKPS 417 T K+FSCN+C R F+SSQALGGHQNAHKRER AKR QRM LP H N RSLG++AHS+ HK S Sbjct: 56 TEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKR--GQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISHKLS 136 The following BLAST results are available for this feature:
BLAST of CK937076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK937076 ID=CK937076; Name=CK937076; organism=Citrus sinensis; type=EST; length=778bpback to top |