CK936852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936852 vs. ExPASy Swiss-Prot
Match: RGA4_SOLBU (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.196e-18 Identity = 59/195 (30.26%), Postives = 102/195 (52.31%), Query Frame = 1 Query: 103 MVDAIISPLLELLTSMAVEEAKEQLRLVTGVGKESKKLTSNLQAIRAVLHDAEKRQVKEETVRLWLDRLRCACYDVEDVLGEWNTARLKLQIDGVDDHENDALVPKKKVGSFFPAASCFGCKPIFLRRRIALKMKDINETLDDIDKQKAMFGFAVNVTKSNERADQRGPASISSIDESEIFGRQKEKNELVNRLL 687 M +A + LLE LTS ++L L+ G KE +KL+S I+AVL DA+++Q+K++ + WL +L A Y+V+D+LGE ++ + + ++G + P I R +I +MK+I E LD I +++ F F +T+ A R + + E +++GR KE++E+V L+ Sbjct: 1 MAEAFLQVLLENLTSFI----GDKLVLIFGFEKECEKLSSVFSTIQAVLQDAQEKQLKDKAIENWLQKLNSAAYEVDDILGECKNEAIRFE--------------QSRLGFYHPGI-------INFRHKIGRRMKEIMEKLDAISEERRKFHFLEKITERQAAAATRETGFV--LTEPKVYGRDKEEDEIVKILI 168
BLAST of CK936852 vs. ExPASy Swiss-Prot
Match: RGA3_SOLBU (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.513e-13 Identity = 58/197 (29.44%), Postives = 96/197 (48.73%), Query Frame = 1 Query: 103 MVDAIISPLLELLTSMAVEEAKEQLRLVTGVGKESKKLTSNLQAIRAVLHDAEKRQVKEETVRLWLDRLRCACYDVEDVLGEWNT--ARLKLQIDGVDDHENDALVPKKKVGSFFPAASCFGCKPIFLRRRIALKMKDINETLDDIDKQKAMFGFAVNVTKSNERADQRGPASISSIDESEIFGRQKEKNELVNRLL 687 M +A + LL+ LT E L LV G KE KKL+S I+AVL DA+++Q+K + ++ WL +L A Y+V+D+L + T AR K + +G + P F K + +MK++ E LD I +++ F + + Q G + E +++GR+KE++E+V L+ Sbjct: 1 MAEAFLQVLLDNLTFFIQGE----LGLVFGFEKEFKKLSSMFSMIQAVLEDAQEKQLKYKAIKNWLQKLNVAAYEVDDILDDCKTEAARFKQAV----------------LGRYHPRTITFCYK-------VGKRMKEMMEKLDAIAEERRNFHLDERIIERQAARRQTG----FVLTEPKVYGREKEEDEIVKILI 166
BLAST of CK936852 vs. ExPASy Swiss-Prot
Match: RGA1_SOLBU (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum GN=RGA1 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 7.511e-13 Identity = 51/195 (26.15%), Postives = 95/195 (48.72%), Query Frame = 1 Query: 103 MVDAIISPLLELLTSMAVEEAKEQLRLVTGVGKESKKLTSNLQAIRAVLHDAEKRQVKEETVRLWLDRLRCACYDVEDVLGEWNTARLKLQIDGVDDHENDALVPKKKVGSFFPAASCFGCKPIFLRRRIALKMKDINETLDDIDKQKAMFGFAVNVTKSNERADQRGPASISSIDESEIFGRQKEKNELVNRLL 687 M +A I +L+ LTS K +L L+ G E ++L+S I+AVL DA+++Q+ ++ + WL +L A Y+V+D+L E+ T + + + G + P K I R ++ +M + + L+ I +++ F + + + G S + E +++GR KEK+E+V L+ Sbjct: 1 MAEAFIQVVLDNLTSFL----KGELVLLFGFQDEFQRLSSMFSTIQAVLEDAQEKQLNDKPLENWLQKLNAATYEVDDILDEYKTKATRFL--------------QSEYGRYHP-------KVIPFRHKVGKRMDQVMKKLNAIAEERKKFHLQEKIIERQAATRETG----SVLTEPQVYGRDKEKDEIVKILI 166
BLAST of CK936852 vs. ExPASy Swiss-Prot
Match: RGA2_SOLBU (Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12 Identity = 52/195 (26.67%), Postives = 93/195 (47.69%), Query Frame = 1 Query: 103 MVDAIISPLLELLTSMAVEEAKEQLRLVTGVGKESKKLTSNLQAIRAVLHDAEKRQVKEETVRLWLDRLRCACYDVEDVLGEWNTARLKLQIDGVDDHENDALVPKKKVGSFFPAASCFGCKPIFLRRRIALKMKDINETLDDIDKQKAMFGFAVNVTKSNERADQRGPASISSIDESEIFGRQKEKNELVNRLL 687 M +A I LL+ LTS K +L L+ G E ++L+S I+AVL DA+++Q+ + + WL +L A Y+V+D+L E+ T + + + G + P K I R ++ +M + + L I +++ F + + + G S + E +++GR KEK+E+V L+ Sbjct: 1 MAEAFIQVLLDNLTSFL----KGELVLLFGFQDEFQRLSSMFSTIQAVLEDAQEKQLNNKPLENWLQKLNAATYEVDDILDEYKTKATRFS--------------QSEYGRYHP-------KVIPFRHKVGKRMDQVMKKLKAIAEERKNFHLHEKIVERQAVRRETG----SVLTEPQVYGRDKEKDEIVKILI 166 The following BLAST results are available for this feature:
BLAST of CK936852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK936852 ID=CK936852; Name=CK936852; organism=Citrus sinensis; type=EST; length=735bpback to top |