EL492543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RHOPS (30S ribosomal protein S16 OS=Rhodopseudomonas palustris (strain BisB5) GN=rpsP PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.171e-19 Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 VVIRLAR G K +PFY V+ ADSR PRDG+ +E LGY+NPL +D R+ L+ D+VK WL+ GAQPSD V R L AG+ Sbjct: 3 VVIRLARAGTKKRPFYHVVVADSRFPRDGRFIERLGYFNPLMAKDNEARLKLDLDKVKDWLAKGAQPSDRVARFLDTAGI 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_SPHWW (30S ribosomal protein S16 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=rpsP PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.530e-19 Identity = 46/80 (57.50%), Postives = 59/80 (73.75%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 V IRLAR G K +P+YR++ AD+RSPRDG +E +G YNPL +D KR+ L+ DR K+WLSVGAQP+D V R L AG+ Sbjct: 3 VSIRLARGGAKKRPYYRIVVADARSPRDGAFIEKIGAYNPLLAKDDPKRVVLDTDRAKHWLSVGAQPTDRVARFLDAAGV 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RHOPT (30S ribosomal protein S16 OS=Rhodopseudomonas palustris (strain TIE-1) GN=rpsP PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.530e-19 Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 VVIRLAR G K +PFY V+ ADSR PRDG+ +E LGY+NPL +D R+ L+ D+VK WL+ GAQPSD V R L AG+ Sbjct: 3 VVIRLARAGTKKRPFYHVVVADSRFPRDGRFIERLGYFNPLMAKDNEARLKLDLDKVKDWLAKGAQPSDRVARFLDTAGV 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RHOPA (30S ribosomal protein S16 OS=Rhodopseudomonas palustris GN=rpsP PE=1 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 1.530e-19 Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 VVIRLAR G K +PFY V+ ADSR PRDG+ +E LGY+NPL +D R+ L+ D+VK WL+ GAQPSD V R L AG+ Sbjct: 3 VVIRLARAGTKKRPFYHVVVADSRFPRDGRFIERLGYFNPLMAKDNEARLKLDLDKVKDWLAKGAQPSDRVARFLDTAGV 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_ROSDO (30S ribosomal protein S16 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=rpsP PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.408e-19 Identity = 45/78 (57.69%), Postives = 59/78 (75.64%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 IRLAR G K +PFYR++AADSR PRDG+ +E LG YNPL +D +R+ ++ +RV+YWL GAQP+D V R+L AGL Sbjct: 5 IRLARGGSKKRPFYRIVAADSRMPRDGRFIEKLGTYNPLLPKDSEERVKMDAERVQYWLGQGAQPTDRVARMLEAAGL 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RHOP2 (30S ribosomal protein S16 OS=Rhodopseudomonas palustris (strain HaA2) GN=rpsP PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.592e-19 Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 VVIRLAR G K +PFY V+ ADSR PRDG+ +E LGY+NPL +D R+ L+ D+VK WL+ GAQPSD V R L G+ Sbjct: 3 VVIRLARAGTKKRPFYHVVVADSRFPRDGRFIERLGYFNPLMAKDNEARLKLDLDKVKDWLAKGAQPSDRVARFLDITGV 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RHIME (30S ribosomal protein S16 OS=Rhizobium meliloti GN=rpsP PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.915e-19 Identity = 43/82 (52.44%), Postives = 61/82 (74.39%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPPP 258 IRLAR G K +P+Y+++ AD+RSPRDG+ LE LG +NP+ +D KR+ LN +RV++W++ GAQP+D V R L +AGL P Sbjct: 5 IRLARGGSKKRPYYQIVVADARSPRDGRFLEKLGSWNPMLAKDDEKRIELNAERVQHWIAQGAQPTDRVMRFLDQAGLAKRP 86
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_NITWN (30S ribosomal protein S16 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rpsP PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.915e-19 Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 VVIRLAR G K +P Y V+AADSR PRDG+ +E LG++NPL +D R+ L+ D+VK WL+ GAQPSD V R L AG+ Sbjct: 3 VVIRLARAGTKKRPVYHVVAADSRYPRDGRFIERLGHFNPLMPKDNADRLKLDLDKVKAWLAKGAQPSDRVARFLDAAGV 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_DINSH (30S ribosomal protein S16 OS=Dinoroseobacter shibae (strain DFL 12) GN=rpsP PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.915e-19 Identity = 44/80 (55.00%), Postives = 59/80 (73.75%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLP 252 IRLAR G K +PFYR++AADSR PRDG+ +E LG YNPL +D R+ ++ +RV+YWL GA+P+D V R+L A +LP Sbjct: 5 IRLARGGSKKRPFYRIVAADSRMPRDGRFIEKLGTYNPLLPKDSEDRVKMDLERVQYWLGEGAKPTDRVARMLEAAEVLP 84
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_SILPO (30S ribosomal protein S16 OS=Silicibacter pomeroyi GN=rpsP PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.295e-18 Identity = 44/79 (55.70%), Postives = 60/79 (75.95%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 IRLAR G K +PFYR++AADSR PRDG+ +E LG YNPL +D +R+ ++ +RV+YWLS GAQ +D V R+L AG++ Sbjct: 5 IRLARGGSKKRPFYRIVAADSRMPRDGRFIEKLGTYNPLLPKDSEERVKMDVERVQYWLSQGAQTTDRVARMLEAAGVV 83 The following BLAST results are available for this feature:
BLAST of EL492543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492543 ID=EL492543; Name=EL492543; organism=Citrus sinensis; type=EST; length=259bpback to top |