EY665393
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665393 vs. ExPASy Swiss-Prot
Match: LS14A_XENTR (Protein LSM14 homolog A OS=Xenopus tropicalis GN=lsm14a PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.345e-11 Identity = 59/180 (32.78%), Postives = 88/180 (48.89%), Query Frame = 1 Query: 118 YICRLISLTSMSDIRYQGVLFNIFAE*SSICLRSV*SFATQGRKRDGPHFLSYDYIYEYLLFQGSDITDLQD*SSPQIQTTTSIRNDRAIIQSHYSQAAISCTSLPSGTRS*RDTNFPNVTAPTFETSGSRDSSALTSGWKFGCMGSSPCPEQWGLAAMPKTGKDTLVTNWLPGTQNFGS 657 YI ISL S ++IRY+G+L+ I E S++ L V SF T+ R D P D ++EY++F+GSDI DL P+ Q S+ D AI+QS ++ S S + P PT+ S+ S++ G +FG +GSS + G +T + LP + GS Sbjct: 7 YIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-IPPRDEVFEYIIFRGSDIKDLTVCEPPKPQ--CSLPQDPAIVQSSLGSSSASSFQSVS-------SYGPFGRMPTY----SQFSTSPLVGQQFGAVGSS----------LTSFGAETTSSTSLPPSSTVGS 162
BLAST of EY665393 vs. ExPASy Swiss-Prot
Match: LS14A_PONAB (Protein LSM14 homolog A OS=Pongo abelii GN=LSM14A PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 6.674e-11 Identity = 58/180 (32.22%), Postives = 88/180 (48.89%), Query Frame = 1 Query: 118 YICRLISLTSMSDIRYQGVLFNIFAE*SSICLRSV*SFATQGRKRDGPHFLSYDYIYEYLLFQGSDITDLQD*SSPQIQTTTSIRNDRAIIQSHYSQAAISCTSLPSGTRS*RDTNFPNVTAPTFETSGSRDSSALTSGWKFGCMGSSPCPEQWGLAAMPKTGKDTLVTNWLPGTQNFGS 657 YI ISL S ++IRY+G+L+ I E S++ L V SF T+ R D P D ++EY++F+GSDI DL P+ Q S+ D AI+QS + S S+ S P PT+ S+ S + G +FG +G + +++ G +T + LP + GS Sbjct: 7 YIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-IPPRDEVFEYIIFRGSDIKDLTVCEPPKPQ--CSLPQDPAIVQSSLGSSTSSFQSMGS--------YGPFGRMPTY----SQFSPSSLVGQQFGAVGVAG-------SSLTSFGTETSNSGTLPQSSAVGS 164
BLAST of EY665393 vs. ExPASy Swiss-Prot
Match: LS14A_HUMAN (Protein LSM14 homolog A OS=Homo sapiens GN=LSM14A PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 6.674e-11 Identity = 58/180 (32.22%), Postives = 88/180 (48.89%), Query Frame = 1 Query: 118 YICRLISLTSMSDIRYQGVLFNIFAE*SSICLRSV*SFATQGRKRDGPHFLSYDYIYEYLLFQGSDITDLQD*SSPQIQTTTSIRNDRAIIQSHYSQAAISCTSLPSGTRS*RDTNFPNVTAPTFETSGSRDSSALTSGWKFGCMGSSPCPEQWGLAAMPKTGKDTLVTNWLPGTQNFGS 657 YI ISL S ++IRY+G+L+ I E S++ L V SF T+ R D P D ++EY++F+GSDI DL P+ Q S+ D AI+QS + S S+ S P PT+ S+ S + G +FG +G + +++ G +T + LP + GS Sbjct: 7 YIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-IPPRDEVFEYIIFRGSDIKDLTVCEPPKPQ--CSLPQDPAIVQSSLGSSTSSFQSMGS--------YGPFGRMPTY----SQFSPSSLVGQQFGAVGVAG-------SSLTSFGTETSNSGTLPQSSAVGS 164 The following BLAST results are available for this feature:
BLAST of EY665393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY665393 ID=EY665393; Name=EY665393; organism=Citrus sinensis; type=EST; length=1208bpback to top |