EY665387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665387 vs. ExPASy Swiss-Prot
Match: CRS2A_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Arabidopsis thaliana GN=CRS2A PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.638e-38 Identity = 72/117 (61.54%), Postives = 85/117 (72.65%), Query Frame = 1 Query: 97 MLYALSAPKTCISCPRGPPFPQKRQVSTRLC-VHASLP-DDNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFDMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQA*LKF 441 M A S+P T P+ F Q + S R + ASLP DN K EYTPWLIVGLGNPG+KY+GTRHN+GF+MIDHIA+A I+MNTIQSKAL+GIGS+GEVPILL KPQ + F Sbjct: 1 MFCASSSPITSPLYPKAYKFSQTKSNSKRFSSLRASLPVSDNKLLKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNF 117 HSP 2 Score: 45.0542 bits (105), Expect = 1.638e-38 Identity = 29/91 (31.87%), Postives = 41/91 (45.05%), Query Frame = 2 Query: 437 NFSGESAGPLGCTLSSTAASLFIDLGEMNLRKWGSQTSTKRKAWAYKGVKNGINHLEGCREFPTRA-KYGKPHGKRD-KSLVQPNINPLKR 703 NFSGES GPL + + +M L + K + G+KN HL GCR +P + G P G D K+ + +PL+R Sbjct: 116 NFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLER 206
BLAST of EY665387 vs. ExPASy Swiss-Prot
Match: CRS2_MAIZE (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea mays GN=CRS2 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.395e-32 Identity = 68/134 (50.75%), Postives = 84/134 (62.69%), Query Frame = 1 Query: 40 ALPRLCSFIVVS*KPKNRSMLYALSAPKTCISCPRGPPFPQKRQVSTRLCVHASLPDDNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFDMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQA*LKF 441 A+P S P R +L+AP I PR PF V +S+PD G VEYTPWLI GLGNPG KY+GTRHNVGF+M+D IA + I MNTIQSK+L+GIGSIGEVP+L+ KPQ+ + + Sbjct: 7 AIPSTSSHFSAPFLPSFRMPRKSLTAPLHRIRRPR--PFT----------VVSSVPDPAAG-PVEYTPWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNY 127 HSP 2 Score: 41.9726 bits (97), Expect = 4.395e-32 Identity = 24/47 (51.06%), Postives = 29/47 (61.70%), Query Frame = 3 Query: 447 GNRPGLLAALYQVPLLHFLLI*EK*I*GNGVPKLRQKGRHGPTKGLK 587 G G LAA YQVPL H LLI + NGV +L++KG HG GL+ Sbjct: 129 GEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQ 175
BLAST of EY665387 vs. ExPASy Swiss-Prot
Match: CRS2B_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Arabidopsis thaliana GN=CRS2B PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 4.314e-27 Identity = 73/149 (48.99%), Postives = 90/149 (60.40%), Query Frame = 1 Query: 157 PQKRQVSTRLCVHASLPDDNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFDMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQA*LKFQW-GIGRASWLHFIKYRCFTFY*SRRNEFKEMGFPN----FDKKEGMGLQRG*K 588 P R+ R+C S +D+ FKVEYTPWLIVGLGNPG KYHGTRHNVGF+MID +A+ + + MNTIQSKALIGIG+I +VPILLAKPQ + F +G + + + R + EM PN K G G G K Sbjct: 18 PVFRKQRFRVCSSTSGGEDDR-FKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHILMI------YDEMALPNGVLRLQPKGGQGYHNGVK 159
BLAST of EY665387 vs. ExPASy Swiss-Prot
Match: CRS2_ORYSJ (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0132800 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.255e-26 Identity = 68/146 (46.58%), Postives = 89/146 (60.96%), Query Frame = 1 Query: 160 QKRQVSTRLCVHASLPDDNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFDMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQA*LKFQW-GIGRASWLHFIKYRCFTFY*SRRNEFKEMGFPN----FDKKEGMGLQRG 582 ++ ++ R+ V AS+PD EYTPWLI GLGNPG KYHGTRHNVGF+M+D IA+ + I MNTIQSK+L+GIGSIGEVP+LL KPQ+ + + IG + + + R + EM PN +K G G G Sbjct: 38 RRTRLRRRIAVVASVPDP-AARPAEYTPWLIAGLGNPGSKYHGTRHNVGFEMVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQVPLRHILVM------YDEMSLPNGVLRLQRKGGHGRHNG 176
BLAST of EY665387 vs. ExPASy Swiss-Prot
Match: PTHM_ORYSJ (Peptidyl-tRNA hydrolase, mitochondrial OS=Oryza sativa subsp. japonica GN=Os01g0693900 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 8.909e-22 Identity = 44/77 (57.14%), Postives = 57/77 (74.03%), Query Frame = 1 Query: 196 ASLPDDNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFDMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 426 A+ D G K PWL VGLGNPG Y GTRHNVGF+MID IA+A+ I+++++Q KA++G G IG+ PI+LAKPQ Sbjct: 44 AAAAGDGGALK----PWLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLAKPQ 116 HSP 2 Score: 33.8834 bits (76), Expect = 8.909e-22 Identity = 24/77 (31.17%), Postives = 36/77 (46.75%), Query Frame = 2 Query: 437 NFSGESAGPLGCTLSSTAASLFIDLGEMNLRKWGSQTSTKRKAWAYKGVKNGINHLEGCREFP-TRAKYGKPHGKRD 664 N SGES G L + + +++L + K + GV++ INHL+ R+FP R G+P GK D Sbjct: 120 NASGESVGQLVSYFKIPLNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGVRSIINHLKQNRDFPRLRIGIGRPPGKMD 196
BLAST of EY665387 vs. ExPASy Swiss-Prot
Match: PTHM_ARATH (Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana GN=At5g19830 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.616e-20 Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = 1 Query: 235 YTPWLIVGLGNPGIKYHGTRHNVGFDMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 426 + PWL +GLGNPG KY GTRHN+GF+MID A++ I MN + KA++G G + ++P++LAKPQ Sbjct: 16 HRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVILAKPQ 79 HSP 2 Score: 37.7354 bits (86), Expect = 1.616e-20 Identity = 25/77 (32.47%), Postives = 35/77 (45.45%), Query Frame = 2 Query: 437 NFSGESAGPLGCTLSSTAASLFIDLGEMNLRKWGSQTSTKRKAWAYKGVKNGINHLEGCREFP-TRAKYGKPHGKRD 664 N SGES+GPL + + +M L + K + G+K+ +NH G REF R GKP G+ D Sbjct: 83 NLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVMNHFRGNREFARLRIGIGKPPGQMD 159
BLAST of EY665387 vs. ExPASy Swiss-Prot
Match: PTHC_ARATH (Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana GN=At1g18440 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 4.324e-19 Identity = 43/62 (69.35%), Postives = 51/62 (82.26%), Query Frame = 1 Query: 241 PWLIVGLGNPGIKYHGTRHNVGFDMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 426 PWLIVGLGNPG KY GTRHNVGF+M+D +A A+ I+MNT+ KAL G G IG +PI+LAKPQ Sbjct: 94 PWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKPQ 155
BLAST of EY665387 vs. ExPASy Swiss-Prot
Match: CRS2L_ORYSJ (CRS2-like protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0347800 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.471e-17 Identity = 49/92 (53.26%), Postives = 55/92 (59.78%), Query Frame = 1 Query: 151 PFPQKRQVSTRLCVHASLPDDNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFDMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 426 PF KR ST SL + V PWL VGLGNPG KY TRHNVGFDMID AQ+Q I++ KAL G G + VP+LLAKPQ Sbjct: 34 PFISKRHASTS---QTSLSSSSSSCSV-INPWLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPVLLAKPQ 121 HSP 2 Score: 21.9422 bits (45), Expect = 9.471e-17 Identity = 10/30 (33.33%), Postives = 14/30 (46.67%), Query Frame = 2 Query: 437 NFSGESAGPLGCTLSSTAASLFIDLGEMNL 526 N SGES GPL + + +M+L Sbjct: 125 NLSGESVGPLAAYYKLPLNRVLVAFDDMDL 154
BLAST of EY665387 vs. ExPASy Swiss-Prot
Match: PTH_CLOD6 (Peptidyl-tRNA hydrolase OS=Clostridium difficile (strain 630) GN=pth PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.002e-12 Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 1 Query: 244 WLIVGLGNPGIKYHGTRHNVGFDMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 426 +++VGLGNPG KY TRHNVGFD+ID +A+ I++ I+ KALIG G +G +LL KPQ Sbjct: 2 YVVVGLGNPGKKYEKTRHNVGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVKPQ 62
BLAST of EY665387 vs. ExPASy Swiss-Prot
Match: PTH_ALKMQ (Peptidyl-tRNA hydrolase OS=Alkaliphilus metalliredigens (strain QYMF) GN=pth PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.920e-12 Identity = 35/61 (57.38%), Postives = 44/61 (72.13%), Query Frame = 1 Query: 244 WLIVGLGNPGIKYHGTRHNVGFDMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQ 426 ++IVGLGNPG KY GTRHNVGFD+ID +A I +N ++ KAL G IG ++LAKPQ Sbjct: 2 YIIVGLGNPGKKYSGTRHNVGFDVIDLLAHRLGITVNKLKHKALYGEARIGGEKVILAKPQ 62 The following BLAST results are available for this feature:
BLAST of EY665387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY665387 ID=EY665387; Name=EY665387; organism=Citrus sinensis; type=EST; length=1071bpback to top |