CV884949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U7373_ARATH (UPF0737 protein AFP3 OS=Arabidopsis thaliana GN=AFP3 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.127e-22 Identity = 59/108 (54.63%), Postives = 69/108 (63.89%), Query Frame = -1 Query: 236 PVSTTEN----LSPTGSKESKKDVGKPPKPQIQSQNTPSLPHMPCVSTTGNGPNGKTINGFLYRYTK-TEVSIVCVCHGTSFSPAEFVLHAGGTDVSQPLKHITVIPS 544 PV T N SP+ ++ +++GK I + MP VSTTG+GPNGK INGFLYRY K EV IVCVCHG+ SPAEFV HAGG DV+ PLKHI V PS Sbjct: 128 PVQATTNKSVETSPSSAQSQPENLGKEASQNI-------IEDMPFVSTTGDGPNGKKINGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPS 228
BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U7373_ORYSJ (UPF0737 protein Os03g0419100 OS=Oryza sativa subsp. japonica GN=Os03g0419100 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19 Identity = 69/169 (40.83%), Postives = 86/169 (50.89%), Query Frame = -1 Query: 236 SNSGKPKTSSKDAQC--------SPPTNCTTNFVQQTALSNAVDCSPAKPKEEVATELHGASSQNPVSTTENLSPTGSKESKKDVGKPPKPQIQSQNTPSLPHMPCVSTTGNGPNGKTINGFLYRYTKTE-VSIVCVCHGTSFSPAEFVLHAGGTDVSQPLKHITVIPS 715 S+S P+ D SP T+ TN Q +AL S KP T+ Q+P+ T +L+ S S D+GK + MP VS+ GPNG+ I+GFLY+Y K E VSI+CVCHG SPAEFV HAGG DVS PL+HI V PS Sbjct: 158 SSSANPQDQGPDGSAICQSTEARSPSTSDDTN--QNSALPPTA--STGKPLNGTVTQ------QSPLRTLGSLTMRTS--STGDIGK------------IMMDMPMVSSKVEGPNGRKIDGFLYKYRKGEDVSIMCVCHGKFHSPAEFVKHAGGGDVSNPLRHIVVNPS 302
BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U7372_ARATH (UPF0737 protein AFP2 OS=Arabidopsis thaliana GN=AFP2 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.092e-17 Identity = 49/115 (42.61%), Postives = 66/115 (57.39%), Query Frame = -1 Query: 233 TELHGASSQNPVSTTENLSPTGSKESKKDVGKPPKPQIQSQNTPSLPHMPCVSTTGNGPNGKTINGFLYRYTK-TEVSIVCVCHGTSFSPAEFVLHAGGTDVSQPLKHITVIPSA 574 TE + N V+ EN S++S GK + L MPCV T G+GPNG+ ++G LY+Y K EV I+C+CHG+ +PAEFV H GG DV +PL+HI V S+ Sbjct: 237 TERPSVTRANKVNENENEKRVRSEDSVDRKGKG------MATSTGLVDMPCVFTKGDGPNGRRVDGILYKYGKGEEVRIMCICHGSFLTPAEFVKHGGGGDVDRPLRHIVVNTSS 345
BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U7372_ORYSJ (UPF0737 protein Os07g0602900 OS=Oryza sativa subsp. japonica GN=Os07g0602900 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.862e-17 Identity = 62/178 (34.83%), Postives = 82/178 (46.07%), Query Frame = -1 Query: 236 GKPKTSSKDAQCSPPTNCTTNFVQQTALSNAVDCSPAKPKEEVATELHGASSQNPVSTTENLSPTGSKESKKDVGKPPKPQIQSQNTP--------------------SLPHMPCVSTTGNGPNGKTINGFLYRYTKTE-VSIVCVCHGTSFSPAEFVLHAGGTDVSQPLKHITVIPS 706 G + +DA + V Q + S+ C P + A + +SS N + L PT S G+PP + P + MP VS+ +GPNG+ I+GFLY+Y K E V IVCVCHG +PAEFV HAGG DV+ PL+HI V PS Sbjct: 141 GGGRDDGQDAMYPTGFQLRRSVVSQGSTSS---CMPEQGVGVGAEAMDTSSSDNASCQNKPLPPTASSGGGGG-GRPPANGSMKEQPPLRTLRSLTMRTTSTGDLRKSMMEDMPMVSSRVDGPNGRKIDGFLYKYRKREEVRIVCVCHGNFLTPAEFVKHAGGGDVTNPLRHIVVNPS 314
BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U7372_WHEAT (UPF0737 protein 2 OS=Triticum aestivum GN=AFP-B1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.177e-17 Identity = 54/121 (44.63%), Postives = 69/121 (57.02%), Query Frame = -1 Query: 236 HGASSQNPVSTTENLSPTGSKESKKDVGKPPKPQIQS--QNTPS--------LPHMPCVSTTGNGPNGKTINGFLYRYTK-TEVSIVCVCHGTSFSPAEFVLHAGGTDVSQPLKHITVIPS 565 + AS+QN SP G + +PP ++S T S + MP VS+ +GPNGK I+GFLY+Y K EV IVCVCHG +PAEFV HAGG DV+ PL+HI V P+ Sbjct: 191 NNASNQNKSLPPPAPSPAGKLPNGIVKEQPPLRTLRSLTMRTTSTGDLRKSMMEDMPMVSSKVDGPNGKKIDGFLYKYRKGEEVRIVCVCHGNFLTPAEFVKHAGGGDVTNPLRHIVVNPA 311
BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U7371_WHEAT (UPF0737 protein 1 OS=Triticum aestivum GN=AFP-A1 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.149e-17 Identity = 43/66 (65.15%), Postives = 50/66 (75.76%), Query Frame = -1 Query: 236 MPCVSTTGNGPNGKTINGFLYRYTK-TEVSIVCVCHGTSFSPAEFVLHAGGTDVSQPLKHITVIPS 430 MP VS+ +GPNGK I+GFLY+Y K EV IVCVCHG +PAEFV HAGG DV+ PL+HI V PS Sbjct: 245 MPMVSSKVDGPNGKKIDGFLYKYRKGEEVRIVCVCHGNFLTPAEFVKHAGGGDVTNPLRHIVVNPS 310
BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U7371_ARATH (UPF0737 protein AFP1 OS=Arabidopsis thaliana GN=AFP1 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.077e-17 Identity = 50/125 (40.00%), Postives = 72/125 (57.60%), Query Frame = -1 Query: 233 EVATELHGASSQNPVSTTENLSPTGSKESKK-------DVGKPPKPQIQSQNTPSLPHMPCVSTTGNGPNGKTINGFLYRY-TKTEVSIVCVCHGTSFSPAEFVLHAGGTDVSQPLKHITVIPSA 583 E+ T+ +++ STT+ T +K + + D+ +PQ + ++ MPCV T G+GPNGK ++G LYRY + EV I+CVCHG SPA+FV HAGG V PL+HI V S+ Sbjct: 221 ELETKASSDEARSLPSTTQPQQETTTKPTNRLRRLSSVDMNMKMEPQGKGKS-----EMPCVFTKGDGPNGKRVDGILYRYGSGEEVRIMCVCHGDFLSPADFVKHAGGPHVDHPLRHIVVNTSS 340
BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U7373_WHEAT (UPF0737 protein 3 OS=Triticum aestivum GN=AFP-D1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.059e-16 Identity = 42/66 (63.64%), Postives = 49/66 (74.24%), Query Frame = -1 Query: 236 MPCVSTTGNGPNGKTINGFLYRYTK-TEVSIVCVCHGTSFSPAEFVLHAGGTDVSQPLKHITVIPS 430 MP VS+ +GPN K I+GFLY+Y K EV IVCVCHG +PAEFV HAGG DV+ PL+HI V PS Sbjct: 240 MPIVSSKVDGPNSKKIDGFLYKYRKGEEVRIVCVCHGNFLTPAEFVKHAGGGDVTNPLRHIVVNPS 305
BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U7371_ORYSJ (UPF0737 protein Os03g0214200 OS=Oryza sativa subsp. japonica GN=Os03g0214200 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.512e-16 Identity = 42/68 (61.76%), Postives = 49/68 (72.06%), Query Frame = -1 Query: 239 LPHMPCVSTTGNGPNGKTINGFLYRYTK-TEVSIVCVCHGTSFSPAEFVLHAGGTDVSQPLKHITVIP 439 + MPCV T G PNGK + GFLY+Y K EV IVCVCHG+ +PAEFV HAGG DV+ PL+HI V P Sbjct: 329 MQEMPCVCTKGL-PNGKRVEGFLYKYRKGEEVRIVCVCHGSFLTPAEFVKHAGGGDVANPLRHIVVNP 395
BLAST of CV884949 vs. ExPASy Swiss-Prot
Match: U7376_MAIZE (UPF0737 protein 6 OS=Zea mays PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.022e-15 Identity = 41/66 (62.12%), Postives = 48/66 (72.73%), Query Frame = -1 Query: 236 MPCVSTTGNGPNGKTINGFLYRYTKTE-VSIVCVCHGTSFSPAEFVLHAGGTDVSQPLKHITVIPS 430 MP VS+ GPN + I+GFLYRY K E V IVCVCHG+ +PAEFV HAGG DV PL+HI V P+ Sbjct: 220 MPMVSSKVEGPNARRIDGFLYRYKKGEDVRIVCVCHGSFLTPAEFVKHAGGGDVPNPLRHIVVNPA 285 The following BLAST results are available for this feature:
BLAST of CV884949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884949 ID=CV884949; Name=CV884949; organism=Citrus sinensis; type=EST; length=907bpback to top |