EY665332

Overview
NameEY665332
Unique NameEY665332
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1087
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3C_RICCO (Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 8.418e-95
Identity = 158/207 (76.33%), Postives = 173/207 (83.57%), Query Frame = 1
Query:    1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLKRQTSP-----WKYYREPRNRERNPL 606
            QNHGHVENDESWHPLSEKI+++LD+ T+ LRF +PFP+LAYPFYLWSRSPGK GSHF P+S LFVP ERKD+ITST CWTAMAALLV L+F MGP+Q+LKLYG+PYWIFVMWLD VTYLHHHGHEDKLPWYRGK WSYLR GLTTLDRDYGW +NIHHDIGTHVIHHLFPQIPHY    HL   T        KYYREP+     PL
Sbjct:  218 QNHGHVENDESWHPLSEKIFKSLDNVTKTLRFSLPFPMLAYPFYLWSRSPGKKGSHFHPDSGLFVPKERKDIITSTACWTAMAALLVYLNFSMGPVQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKAWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHY----HLVEATEAAKPVMGKYYREPKKSGPLPL 420          
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3C_SESIN (Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 1.099e-94
Identity = 162/205 (79.02%), Postives = 177/205 (86.34%), Query Frame = 1
Query:    1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLK-RQTSPWKYYREPRNRERNPLTF 612
            QNHGHVENDESWHPLSEKIY+ LD+AT+ LRF +PFPLLAYP YLWSRSPGK GSHF P+SDLFVP+E+KDVITSTVCWTAM ALLVGLSFV+GP+QLLKLYG+PY   VMWLDLVTYLHHHGHEDKLPWYRGKEWSYLR GLTTLDRDYGW +NIHHDIGTHVIHHLFPQIPHY  I   +  +    KYYREP  ++  PL F
Sbjct:  208 QNHGHVENDESWHPLSEKIYKNLDTATKKLRFTLPFPLLAYPIYLWSRSPGKQGSHFHPDSDLFVPNEKKDVITSTVCWTAMLALLVGLSFVIGPVQLLKLYGIPYLGNVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREP--KKSAPLPF 410          
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3D_ARATH (Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 2.449e-94
Identity = 155/207 (74.88%), Postives = 172/207 (83.09%), Query Frame = 1
Query:    1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLKRQTSP-----WKYYREPRNRERNPL 606
            QNHGHVENDESWHPL E IY+ L+  T+  RF +PFP+LAYPFYLW+RSPGK GSH+ P+SDLF+P E+KDV+TST CWTAMAALLV L+FVMGP+Q+LKLYG+PYWIFVMWLD VTYLHHHGHEDKLPWYRGKEWSYLR GLTTLDRDYGW +NIHHDIGTHVIHHLFPQIPHY    HL   T        KYYREP+N    PL
Sbjct:  197 QNHGHVENDESWHPLPESIYKNLEKTTQMFRFTLPFPMLAYPFYLWNRSPGKQGSHYHPDSDLFLPKEKKDVLTSTACWTAMAALLVCLNFVMGPIQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHY----HLVEATEAAKPVLGKYYREPKNSGPLPL 399          
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3C_SOYBN (Omega-3 fatty acid desaturase, chloroplastic OS=Glycine max GN=FAD7 PE=2 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 9.308e-94
Identity = 158/205 (77.07%), Postives = 174/205 (84.88%), Query Frame = 1
Query:    1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLKRQTSPW-KYYREPRNRERNPLTF 612
            Q+HGH ENDESWHPL EK++R+LD+ TR LRF  PFPLLA+P YL+SRSPGKTGSHFDP+SDLFVP+ERKDVITST CW AM  LLVGL FVMGP+QLLKLYGVPY IFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLR GLTTLDRDYGW +NIHHDIGTHVIHHLFPQIPHY  +   +     + KYYREP+ +   PL F
Sbjct:  212 QHHGHAENDESWHPLPEKLFRSLDTVTRMLRFTAPFPLLAFPVYLFSRSPGKTGSHFDPSSDLFVPNERKDVITSTACWAAMLGLLVGLGFVMGPIQLLKLYGVPYVIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVFGKYYREPK-KSAAPLPF 415          
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3C_ARATH (Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=1 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 8.712e-92
Identity = 157/215 (73.02%), Postives = 171/215 (79.53%), Query Frame = 1
Query:    1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLKRQTSP-----WKYYREPRNRERNPLTFWEINLK 630
            QNHGHVENDESWHP+SEKIY TLD  TRF RF +P  +LAYPFYLW+RSPGK GSH+ P+SDLF+P ERKDV+TST CWTAMAALLV L+F +GP+Q+LKLYG+PYWI VMWLD VTYLHHHGHEDKLPWYRGKEWSYLR GLTTLDRDYG  +NIHHDIGTHVIHHLFPQIPHY    HL   T        KYYREP      PL   EI  K
Sbjct:  204 QNHGHVENDESWHPMSEKIYNTLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERKDVLTSTACWTAMAALLVCLNFTIGPIQMLKLYGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHY----HLVEATEAAKPVLGKYYREPDKSGPLPLHLLEILAK 414          
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3C_BRANA (Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 3.660e-90
Identity = 153/207 (73.91%), Postives = 167/207 (80.68%), Query Frame = 1
Query:    1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLKRQTSP-----WKYYREPRNRERNPL 606
            QNHGHVENDESWHP+SEKIY++LD  TRF RF +P  +LAYPFYLW+RSPGK GSH+ P+SDLF+P ER DV+TST CWTAMA LLV L+FVMGPMQ+LKLY +PYWI VMWLD VTYLHHHGHEDKLPWYRGKEWSYLR GLTTLDRDYG  +NIHHDIGTHVIHHLFPQIPHY    HL   T        KYYREP      PL
Sbjct:  162 QNHGHVENDESWHPMSEKIYKSLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAVLLVCLNFVMGPMQMLKLYVIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHY----HLVEATEAAKPVLGKYYREPDKSGPLPL 364          
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3E_SOYBN (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Glycine max GN=FAD3 PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 8.732e-84
Identity = 142/209 (67.94%), Postives = 160/209 (76.56%), Query Frame = 1
Query:    1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLKRQTSPWK-----YYREPRNRERNPLTF 612
            QNHGH+E DESW PL+EKIY+ LDS TR +RF +PFPL  YP YL+SRSPGK GSHF+P S+LF PSERK +  ST+CW  M +LL+ LSF+  P+ +LKLYG+PYWIFVMWLD VTYLHHHGH  KLPWYRGKEWSYLR GLTT+DRDYGW +NIHHDIGTHVIHHLFPQIPHY    HL   T   K     YYREP      PL F
Sbjct:  141 QNHGHIEKDESWVPLTEKIYKNLDSMTRLIRFTVPFPLFVYPIYLFSRSPGKEGSHFNPYSNLFPPSERKGIAISTLCWATMFSLLIYLSFITSPLLVLKLYGIPYWIFVMWLDFVTYLHHHGHHQKLPWYRGKEWSYLRGGLTTVDRDYGWIYNIHHDIGTHVIHHLFPQIPHY----HLVEATQAAKPVLGDYYREPERSA--PLPF 343          
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3E_PHAAU (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Phaseolus aureus GN=ARG1 PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 2.809e-82
Identity = 137/205 (66.83%), Postives = 162/205 (79.02%), Query Frame = 1
Query:    1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLKRQTSP-WKYYREPRNRERNPLTF 612
            QNHGHVE DESW PL+EK+Y+ LD  TR LR+  PFP+ AYPFYLW+RSPGK GSHF+P S+LF P ERK V+TST+CW  + ++L+ LS  +GP+ +LKLYGVPY IFVMWLD VTYLHHHG+  KLPWYRG+EWSYLR GLTT+DRDYGW +N+HHDIGTHVIHHLFPQIPHY  +   K   S   KYYREP  ++  PL F
Sbjct:  138 QNHGHVEKDESWVPLTEKVYKNLDDMTRMLRYSFPFPIFAYPFYLWNRSPGKEGSHFNPYSNLFSPGERKGVVTSTLCWGIVLSVLLYLSLTIGPIFMLKLYGVPYLIFVMWLDFVTYLHHHGYTHKLPWYRGQEWSYLRGGLTTVDRDYGWINNVHHDIGTHVIHHLFPQIPHYHLVEATKSAKSVLGKYYREP--QKSGPLPF 340          
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3E_BRANA (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 3.106e-81
Identity = 136/203 (67.00%), Postives = 160/203 (78.82%), Query Frame = 1
Query:    1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLKRQTSP-WKYYREPRNRERNPL 606
            QNHGHVENDESW PL EK+Y+ L  +TR LR+ +P P+LAYP YLW RSPGK GSHF+P S LF PSERK + TST CW+ M A LV LSF++ P+ +LK+YGVPY IFVMWLD VTYLHHHGH++KLPWYRGKEWSYLR GLTT+DRDYG F+NIHHDIGTHVIHHLFPQIPHY  ++  +       +YYREP+     P+
Sbjct:  139 QNHGHVENDESWVPLPEKLYKNLPHSTRMLRYTVPLPMLAYPIYLWYRSPGKEGSHFNPYSSLFAPSERKLIATSTTCWSIMLATLVYLSFLVDPVTVLKVYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVDATRAAKHVLGRYYREPKTSGAIPI 341          
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3E_TOBAC (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 2.013e-80
Identity = 140/209 (66.99%), Postives = 162/209 (77.51%), Query Frame = 1
Query:    1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLKRQTSP-----WKYYREPRNRERNPLTF 612
            QNHG+VE DESW P+ EK+Y  +  +T+FLR+KIPFPLLAYP YL  RSPGK+GSHF+P SDLF P ERK V+TST+CWT MAALL+ L    G +Q+ K+YG PY IFVMWLD VTYLHHHG+E KLPWYRGKEWSYLR GLTT+DRDYG F+NIHHDIGTHVIHHLFPQIPHY    HL+  T        KYYREP  ++  P+ F
Sbjct:  138 QNHGNVETDESWVPMPEKLYNKVGYSTKFLRYKIPFPLLAYPMYLMKRSPGKSGSHFNPYSDLFQPHERKYVVTSTLCWTVMAALLLYLCTAFGSLQMFKIYGAPYLIFVMWLDFVTYLHHHGYEKKLPWYRGKEWSYLRGGLTTVDRDYGLFNNIHHDIGTHVIHHLFPQIPHY----HLREATKAAKPVLGKYYREP--KKSGPIPF 340          
The following BLAST results are available for this feature:
BLAST of EY665332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
FAD3C_RICCO8.418e-9576.33Omega-3 fatty acid desaturase, chloroplastic OS=Ri... [more]
FAD3C_SESIN1.099e-9479.02Omega-3 fatty acid desaturase, chloroplastic OS=Se... [more]
FAD3D_ARATH2.449e-9474.88Temperature-sensitive omega-3 fatty acid desaturas... [more]
FAD3C_SOYBN9.308e-9477.07Omega-3 fatty acid desaturase, chloroplastic OS=Gl... [more]
FAD3C_ARATH8.712e-9273.02Omega-3 fatty acid desaturase, chloroplastic OS=Ar... [more]
FAD3C_BRANA3.660e-9073.91Omega-3 fatty acid desaturase, chloroplastic (Frag... [more]
FAD3E_SOYBN8.732e-8467.94Omega-3 fatty acid desaturase, endoplasmic reticul... [more]
FAD3E_PHAAU2.809e-8266.83Omega-3 fatty acid desaturase, endoplasmic reticul... [more]
FAD3E_BRANA3.106e-8167.00Omega-3 fatty acid desaturase, endoplasmic reticul... [more]
FAD3E_TOBAC2.013e-8066.99Omega-3 fatty acid desaturase, endoplasmic reticul... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-F10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665332 ID=EY665332; Name=EY665332; organism=Citrus sinensis; type=EST; length=1087bp
CAAAACCATGGGCATGTTGAGAATGATGAATCCTGGCACCCGTTGTCTGA
GAAAATTTACAGGACTTTGGATAGTGCAACAAGATTTTTGAGATTCAAAA
TTCCTTTTCCCTTGCTTGCATATCCCTTTTATCTTTGGAGTAGGAGTCCG
GGGAAGACTGGTTCTCACTTTGACCCTAACAGTGACCTGTTTGTCCCAAG
TGAGAGGAAGGATGTGATCACTTCAACAGTATGCTGGACGGCCATGGCTG
CTTTGCTAGTGGGTTTATCATTTGTAATGGGTCCTATGCAGTTGCTTAAA
CTCTATGGCGTTCCATATTGGATTTTTGTCATGTGGCTGGACCTTGTGAC
TTACTTGCATCACCATGGGCATGAAGACAAACTTCCGTGGTATCGTGGAA
AGGAATGGAGTTACTTAAGGAGAGGGCTCACAACACTTGATCGTGACTAT
GGATGGTTTCATAACATCCACCACGATATTGGAACCCACGTCATACATCA
CCTCTTCCCTCAAATCCCGCATTACCCCTATATAAACCACCTGAAGCGGC
AGACCAGTCCTTGGAAATATTACCGGGAGCCAAGAAATCGGGAACGGAAC
CCTTTAACCTTTTGGGAAATTAATTTAAAACAGGGTTAAAAACCCTATGG
TATTGAAATGGGCAAGTTGTTTATACCAAACCAACCCAGCTTTACGGCTC
TTCCAATCCGGGAAAGATGGGAATTTTTTTACTTTAAACCGGGTTTTAAA
ACTTTTACAACCCATACCAGTCTTATATCCAAAGTTTTAAAACCACATGT
GGGGGGAACTCCTTTAACAAAAAGTGGCCCAAAAAAAAAAATGCCTCGCT
CTTAATATAGGGAAAAAGAGATTTCCACTTGGGAAATTTGAAGGAAAATT
TATTTCCCTCAAAAAATTTTCTCCACATTTTCTGTGTTTTAAAAACTTCT
TTGGAAAAATAGAATTTTTATTTTTCAAACAATAAAAAAAAAAGGGGCCC
AGAAAAAGATAGCCGTGGGAAGATTTCTATTTATATTTTTGGGCCTAAAT
GGTGGGAAACACGCGTTATCGACCCCTTCACGGGAAA
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