EY665332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3C_RICCO (Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1) HSP 1 Score: 347.436 bits (890), Expect = 8.418e-95 Identity = 158/207 (76.33%), Postives = 173/207 (83.57%), Query Frame = 1 Query: 1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLKRQTSP-----WKYYREPRNRERNPL 606 QNHGHVENDESWHPLSEKI+++LD+ T+ LRF +PFP+LAYPFYLWSRSPGK GSHF P+S LFVP ERKD+ITST CWTAMAALLV L+F MGP+Q+LKLYG+PYWIFVMWLD VTYLHHHGHEDKLPWYRGK WSYLR GLTTLDRDYGW +NIHHDIGTHVIHHLFPQIPHY HL T KYYREP+ PL Sbjct: 218 QNHGHVENDESWHPLSEKIFKSLDNVTKTLRFSLPFPMLAYPFYLWSRSPGKKGSHFHPDSGLFVPKERKDIITSTACWTAMAALLVYLNFSMGPVQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKAWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHY----HLVEATEAAKPVMGKYYREPKKSGPLPL 420
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3C_SESIN (Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1) HSP 1 Score: 347.051 bits (889), Expect = 1.099e-94 Identity = 162/205 (79.02%), Postives = 177/205 (86.34%), Query Frame = 1 Query: 1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLK-RQTSPWKYYREPRNRERNPLTF 612 QNHGHVENDESWHPLSEKIY+ LD+AT+ LRF +PFPLLAYP YLWSRSPGK GSHF P+SDLFVP+E+KDVITSTVCWTAM ALLVGLSFV+GP+QLLKLYG+PY VMWLDLVTYLHHHGHEDKLPWYRGKEWSYLR GLTTLDRDYGW +NIHHDIGTHVIHHLFPQIPHY I + + KYYREP ++ PL F Sbjct: 208 QNHGHVENDESWHPLSEKIYKNLDTATKKLRFTLPFPLLAYPIYLWSRSPGKQGSHFHPDSDLFVPNEKKDVITSTVCWTAMLALLVGLSFVIGPVQLLKLYGIPYLGNVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREP--KKSAPLPF 410
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3D_ARATH (Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1) HSP 1 Score: 345.895 bits (886), Expect = 2.449e-94 Identity = 155/207 (74.88%), Postives = 172/207 (83.09%), Query Frame = 1 Query: 1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLKRQTSP-----WKYYREPRNRERNPL 606 QNHGHVENDESWHPL E IY+ L+ T+ RF +PFP+LAYPFYLW+RSPGK GSH+ P+SDLF+P E+KDV+TST CWTAMAALLV L+FVMGP+Q+LKLYG+PYWIFVMWLD VTYLHHHGHEDKLPWYRGKEWSYLR GLTTLDRDYGW +NIHHDIGTHVIHHLFPQIPHY HL T KYYREP+N PL Sbjct: 197 QNHGHVENDESWHPLPESIYKNLEKTTQMFRFTLPFPMLAYPFYLWNRSPGKQGSHYHPDSDLFLPKEKKDVLTSTACWTAMAALLVCLNFVMGPIQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHY----HLVEATEAAKPVLGKYYREPKNSGPLPL 399
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3C_SOYBN (Omega-3 fatty acid desaturase, chloroplastic OS=Glycine max GN=FAD7 PE=2 SV=1) HSP 1 Score: 343.969 bits (881), Expect = 9.308e-94 Identity = 158/205 (77.07%), Postives = 174/205 (84.88%), Query Frame = 1 Query: 1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLKRQTSPW-KYYREPRNRERNPLTF 612 Q+HGH ENDESWHPL EK++R+LD+ TR LRF PFPLLA+P YL+SRSPGKTGSHFDP+SDLFVP+ERKDVITST CW AM LLVGL FVMGP+QLLKLYGVPY IFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLR GLTTLDRDYGW +NIHHDIGTHVIHHLFPQIPHY + + + KYYREP+ + PL F Sbjct: 212 QHHGHAENDESWHPLPEKLFRSLDTVTRMLRFTAPFPLLAFPVYLFSRSPGKTGSHFDPSSDLFVPNERKDVITSTACWAAMLGLLVGLGFVMGPIQLLKLYGVPYVIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVFGKYYREPK-KSAAPLPF 415
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3C_ARATH (Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=1 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 8.712e-92 Identity = 157/215 (73.02%), Postives = 171/215 (79.53%), Query Frame = 1 Query: 1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLKRQTSP-----WKYYREPRNRERNPLTFWEINLK 630 QNHGHVENDESWHP+SEKIY TLD TRF RF +P +LAYPFYLW+RSPGK GSH+ P+SDLF+P ERKDV+TST CWTAMAALLV L+F +GP+Q+LKLYG+PYWI VMWLD VTYLHHHGHEDKLPWYRGKEWSYLR GLTTLDRDYG +NIHHDIGTHVIHHLFPQIPHY HL T KYYREP PL EI K Sbjct: 204 QNHGHVENDESWHPMSEKIYNTLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERKDVLTSTACWTAMAALLVCLNFTIGPIQMLKLYGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHY----HLVEATEAAKPVLGKYYREPDKSGPLPLHLLEILAK 414
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3C_BRANA (Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 3.660e-90 Identity = 153/207 (73.91%), Postives = 167/207 (80.68%), Query Frame = 1 Query: 1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLKRQTSP-----WKYYREPRNRERNPL 606 QNHGHVENDESWHP+SEKIY++LD TRF RF +P +LAYPFYLW+RSPGK GSH+ P+SDLF+P ER DV+TST CWTAMA LLV L+FVMGPMQ+LKLY +PYWI VMWLD VTYLHHHGHEDKLPWYRGKEWSYLR GLTTLDRDYG +NIHHDIGTHVIHHLFPQIPHY HL T KYYREP PL Sbjct: 162 QNHGHVENDESWHPMSEKIYKSLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAVLLVCLNFVMGPMQMLKLYVIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHY----HLVEATEAAKPVLGKYYREPDKSGPLPL 364
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3E_SOYBN (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Glycine max GN=FAD3 PE=2 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 8.732e-84 Identity = 142/209 (67.94%), Postives = 160/209 (76.56%), Query Frame = 1 Query: 1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLKRQTSPWK-----YYREPRNRERNPLTF 612 QNHGH+E DESW PL+EKIY+ LDS TR +RF +PFPL YP YL+SRSPGK GSHF+P S+LF PSERK + ST+CW M +LL+ LSF+ P+ +LKLYG+PYWIFVMWLD VTYLHHHGH KLPWYRGKEWSYLR GLTT+DRDYGW +NIHHDIGTHVIHHLFPQIPHY HL T K YYREP PL F Sbjct: 141 QNHGHIEKDESWVPLTEKIYKNLDSMTRLIRFTVPFPLFVYPIYLFSRSPGKEGSHFNPYSNLFPPSERKGIAISTLCWATMFSLLIYLSFITSPLLVLKLYGIPYWIFVMWLDFVTYLHHHGHHQKLPWYRGKEWSYLRGGLTTVDRDYGWIYNIHHDIGTHVIHHLFPQIPHY----HLVEATQAAKPVLGDYYREPERSA--PLPF 343
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3E_PHAAU (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Phaseolus aureus GN=ARG1 PE=2 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 2.809e-82 Identity = 137/205 (66.83%), Postives = 162/205 (79.02%), Query Frame = 1 Query: 1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLKRQTSP-WKYYREPRNRERNPLTF 612 QNHGHVE DESW PL+EK+Y+ LD TR LR+ PFP+ AYPFYLW+RSPGK GSHF+P S+LF P ERK V+TST+CW + ++L+ LS +GP+ +LKLYGVPY IFVMWLD VTYLHHHG+ KLPWYRG+EWSYLR GLTT+DRDYGW +N+HHDIGTHVIHHLFPQIPHY + K S KYYREP ++ PL F Sbjct: 138 QNHGHVEKDESWVPLTEKVYKNLDDMTRMLRYSFPFPIFAYPFYLWNRSPGKEGSHFNPYSNLFSPGERKGVVTSTLCWGIVLSVLLYLSLTIGPIFMLKLYGVPYLIFVMWLDFVTYLHHHGYTHKLPWYRGQEWSYLRGGLTTVDRDYGWINNVHHDIGTHVIHHLFPQIPHYHLVEATKSAKSVLGKYYREP--QKSGPLPF 340
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3E_BRANA (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 3.106e-81 Identity = 136/203 (67.00%), Postives = 160/203 (78.82%), Query Frame = 1 Query: 1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLKRQTSP-WKYYREPRNRERNPL 606 QNHGHVENDESW PL EK+Y+ L +TR LR+ +P P+LAYP YLW RSPGK GSHF+P S LF PSERK + TST CW+ M A LV LSF++ P+ +LK+YGVPY IFVMWLD VTYLHHHGH++KLPWYRGKEWSYLR GLTT+DRDYG F+NIHHDIGTHVIHHLFPQIPHY ++ + +YYREP+ P+ Sbjct: 139 QNHGHVENDESWVPLPEKLYKNLPHSTRMLRYTVPLPMLAYPIYLWYRSPGKEGSHFNPYSSLFAPSERKLIATSTTCWSIMLATLVYLSFLVDPVTVLKVYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVDATRAAKHVLGRYYREPKTSGAIPI 341
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3E_TOBAC (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 2.013e-80 Identity = 140/209 (66.99%), Postives = 162/209 (77.51%), Query Frame = 1 Query: 1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLKRQTSP-----WKYYREPRNRERNPLTF 612 QNHG+VE DESW P+ EK+Y + +T+FLR+KIPFPLLAYP YL RSPGK+GSHF+P SDLF P ERK V+TST+CWT MAALL+ L G +Q+ K+YG PY IFVMWLD VTYLHHHG+E KLPWYRGKEWSYLR GLTT+DRDYG F+NIHHDIGTHVIHHLFPQIPHY HL+ T KYYREP ++ P+ F Sbjct: 138 QNHGNVETDESWVPMPEKLYNKVGYSTKFLRYKIPFPLLAYPMYLMKRSPGKSGSHFNPYSDLFQPHERKYVVTSTLCWTVMAALLLYLCTAFGSLQMFKIYGAPYLIFVMWLDFVTYLHHHGYEKKLPWYRGKEWSYLRGGLTTVDRDYGLFNNIHHDIGTHVIHHLFPQIPHY----HLREATKAAKPVLGKYYREP--KKSGPIPF 340 The following BLAST results are available for this feature:
BLAST of EY665332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665332 ID=EY665332; Name=EY665332; organism=Citrus sinensis; type=EST; length=1087bpback to top |