CV884641
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884641 vs. ExPASy Swiss-Prot
Match: CUTA_ARATH (Protein CutA, chloroplastic OS=Arabidopsis thaliana GN=CUTA PE=1 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.728e-51 Identity = 103/132 (78.03%), Postives = 118/132 (89.39%), Query Frame = -3 Query: 210 LPFFGSKFSNQARASSNTIKMEGNSKTVPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSSTRD 605 +P SKFS++A +SS I+ME +SKTVPSIVVYVTVPN+EAGKKLA SIV+ KLAACVN VPGIESVYEW+G++Q+D+EELLIIKTRQSLLE LTEHV ANHEYDVPEVIALPITGGS YLEWLK+STR+ Sbjct: 53 VPLLRSKFSSKAFSSS--IRMEESSKTVPSIVVYVTVPNREAGKKLANSIVQEKLAACVNIVPGIESVYEWEGKVQSDSEELLIIKTRQSLLEPLTEHVNANHEYDVPEVIALPITGGSDKYLEWLKNSTRN 182
BLAST of CV884641 vs. ExPASy Swiss-Prot
Match: CUTA1_ORYSJ (Protein CutA 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CUTA1 PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 9.814e-47 Identity = 92/119 (77.31%), Postives = 105/119 (88.24%), Query Frame = -3 Query: 210 ASSNTIKMEGNSKTVPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSSTRD 566 +SS + +ME S TVPSIVVYVTVPNKEAGK+LA SI+ KLAACVN VPGIESVY W+G++QTDAEELLIIKTR+SLL+ LTEHVKANHEYDVPEVIALPI GG+ YLEWLK+STR+ Sbjct: 58 SSSASARMESTSTTVPSIVVYVTVPNKEAGKRLAGSIISEKLAACVNIVPGIESVYWWEGKVQTDAEELLIIKTRESLLDALTEHVKANHEYDVPEVIALPIKGGNLKYLEWLKNSTRE 176
BLAST of CV884641 vs. ExPASy Swiss-Prot
Match: CUTA_HUMAN (Protein CutA OS=Homo sapiens GN=CUTA PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 2.352e-24 Identity = 52/111 (46.85%), Postives = 80/111 (72.07%), Query Frame = -3 Query: 216 EGNSKTVPSIV--VYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSST 542 + S VP V +VT PN++ K++A ++V+ +LAACVN +P I S+YEWKG+I+ D+E L++IKT+ SL+ LT+ V++ H Y+V EVIALP+ G+ PYL+W++ T Sbjct: 58 DSGSGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPYEVAEVIALPVEQGNFPYLQWVRQVT 168
BLAST of CV884641 vs. ExPASy Swiss-Prot
Match: CUTA_RAT (Protein CutA OS=Rattus norvegicus GN=Cuta PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 4.012e-24 Identity = 49/97 (50.52%), Postives = 73/97 (75.26%), Query Frame = -3 Query: 216 YVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSST 506 +VT PN++ K++A ++V+ +LAACVN +P I S+YEWKG+I+ D+E L++IKT+ SL+ LTE V++ H Y+V EVIALP+ G+ PYL W+ T Sbjct: 70 FVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTEFVRSVHPYEVAEVIALPVEQGNPPYLHWVHQVT 166
BLAST of CV884641 vs. ExPASy Swiss-Prot
Match: CUTA_MOUSE (Protein CutA OS=Mus musculus GN=Cuta PE=2 SV=3) HSP 1 Score: 111.309 bits (277), Expect = 4.012e-24 Identity = 49/97 (50.52%), Postives = 73/97 (75.26%), Query Frame = -3 Query: 216 YVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSST 506 +VT PN++ K++A ++V+ +LAACVN +P I S+YEWKG+I+ D+E L++IKT+ SL+ LTE V++ H Y+V EVIALP+ G+ PYL W+ T Sbjct: 70 FVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTEFVRSVHPYEVAEVIALPVEQGNPPYLHWVHQVT 166
BLAST of CV884641 vs. ExPASy Swiss-Prot
Match: CUTA_XENLA (Protein CutA homolog OS=Xenopus laevis GN=cuta PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 1.991e-23 Identity = 50/93 (53.76%), Postives = 68/93 (73.12%), Query Frame = -3 Query: 228 YVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWL 506 YVT PN K +A +V+ KLAACVN +P I S+YEWKG+++ D E LL+IKTR S + LTE+V++ H Y+V EVI+LPI G+ PYL+W+ Sbjct: 53 YVTCPNDTVAKDIARGLVERKLAACVNVIPQITSIYEWKGKLEEDTEVLLMIKTRSSKVSALTEYVRSVHPYEVCEVISLPIEQGNPPYLKWV 145
BLAST of CV884641 vs. ExPASy Swiss-Prot
Match: CUTA_THET8 (Divalent-cation tolerance protein cutA OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=cutA PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.601e-23 Identity = 48/99 (48.48%), Postives = 71/99 (71.72%), Query Frame = -3 Query: 216 VVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSST 512 VV +TVP++E + +A+++V+ +LAACVN VPG+ S+Y W+GE+ D E LL++KT L E VKA H Y VPE++ALPI G++ YL+WL+ +T Sbjct: 4 VVLITVPSEEVARTIAKALVEERLAACVNIVPGLTSIYRWQGEVVEDQELLLLVKTTTHAFPKLKERVKALHPYTVPEIVALPIAEGNREYLDWLRENT 102
BLAST of CV884641 vs. ExPASy Swiss-Prot
Match: CUTA_BOVIN (Protein CutA OS=Bos taurus GN=CUTA PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.567e-23 Identity = 52/108 (48.15%), Postives = 78/108 (72.22%), Query Frame = -3 Query: 216 SKTVPSIV--VYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSST 533 S VP V +VT PN++ K++A ++V+ +LA CVN VP I S+YEWKG+I+ D+E L++IKT+ SL+ LT+ V++ H Y+V EVIALP+ G+ PYL+W++ T Sbjct: 59 SAYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLA-CVNLVPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPYEVAEVIALPVEQGNSPYLQWVRQVT 165
BLAST of CV884641 vs. ExPASy Swiss-Prot
Match: CUTA_ERWCT (Divalent-cation tolerance protein cutA OS=Erwinia carotovora subsp. atroseptica GN=cutA PE=3 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 5.075e-19 Identity = 39/102 (38.24%), Postives = 66/102 (64.71%), Query Frame = -3 Query: 213 SIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSSTR 518 ++V+ T P+ ++LA S+++ +LAACV +PG S+Y W+G+++ +E ++IK+ S + L H+K H YD PE++ LP++GG YL WL +S R Sbjct: 9 AVVILCTAPDDACAQRLANSLLETRLAACVTLLPGARSLYYWEGKLEQQSEVQMLIKSDTSHQQALLTHLKQQHPYDTPELLVLPVSGGDSDYLTWLNASLR 110
BLAST of CV884641 vs. ExPASy Swiss-Prot
Match: CUTA_SHISS (Divalent-cation tolerance protein cutA OS=Shigella sonnei (strain Ss046) GN=cutA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.297e-18 Identity = 41/111 (36.94%), Postives = 66/111 (59.46%), Query Frame = -3 Query: 213 MEGNSKTVPSIVVYVTVPNKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDVPEVIALPITGGSQPYLEWLKSSTR 545 ++ S S+VV T P++ + LA ++ KLAAC +PG S+Y W+G+++ + E +I+KT S + L E +K++H Y PE++ LP+T G YL WL +S R Sbjct: 2 LDEKSSNTASVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR 112 The following BLAST results are available for this feature:
BLAST of CV884641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884641 ID=CV884641; Name=CV884641; organism=Citrus sinensis; type=EST; length=622bpback to top |