CV884410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884410 vs. ExPASy Swiss-Prot
Match: TTC38_PONAB (Tetratricopeptide repeat protein 38 OS=Pongo abelii GN=TTC38 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.198e-15 Identity = 50/165 (30.30%), Postives = 81/165 (49.09%), Query Frame = 1 Query: 313 AVESHSKLLKEFPRDLLSLKRTQILCFYMGRPDLCFDIIHQVLPYNQQE----DFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEEXXXXXXXXXXFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPGAV 795 A E ++L++ P D+L+LK + FY+G + D + ++ P+ + ++ GI +F L+E AE+ AK+ L IN D WS H + H+ + K+ ++FM+ + HN+WH AL YL L IYD HI L+ GA+ Sbjct: 127 ACELWEQILQDHPTDMLALKFSHDAYFYLGYQEQMRDSVARIYPFWTPDIPLSSYVKGIYSFGLMETNFYDQAEKLAKEALSINPTDAWSVHTVAHIHEMKAEIKDGLEFMQH-SETLWKDSDMLACHNYWHWAL-YLIEKGEYEAALTIYDTHILPSLQANGAM 289
BLAST of CV884410 vs. ExPASy Swiss-Prot
Match: TTC38_HUMAN (Tetratricopeptide repeat protein 38 OS=Homo sapiens GN=TTC38 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.767e-15 Identity = 49/165 (29.70%), Postives = 80/165 (48.48%), Query Frame = 1 Query: 313 AVESHSKLLKEFPRDLLSLKRTQILCFYMGRPDLCFDIIHQVLPYNQQE----DFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEEXXXXXXXXXXFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPGAV 795 A E ++L++ P D+L+LK + FY+G + D + ++ P+ + ++ GI +F L+E AE+ AK+ L IN D WS H + H+ + K+ ++FM+ + HN+WH AL YL L IYD HI L+ A+ Sbjct: 127 ACELWEQILQDHPTDMLALKFSHDAYFYLGYQEQMRDSVARIYPFWTPDIPLSSYVKGIYSFGLMETNFYDQAEKLAKEALSINPTDAWSVHTVAHIHEMKAEIKDGLEFMQH-SETFWKDSDMLACHNYWHWAL-YLIEKGEYEAALTIYDTHILPSLQANDAM 289
BLAST of CV884410 vs. ExPASy Swiss-Prot
Match: TTC38_MOUSE (Tetratricopeptide repeat protein 38 OS=Mus musculus GN=Ttc38 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.730e-14 Identity = 48/165 (29.09%), Postives = 81/165 (49.09%), Query Frame = 1 Query: 313 AVESHSKLLKEFPRDLLSLKRTQILCFYMGRPDLCFDIIHQVLPYNQQE----DFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEEXXXXXXXXXXFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPGAV 795 A + ++L++ P D+L+LK + FY+G + D + +V P+ + ++ GI +F L+E A++ AK+ L I D WS H + HV + K+ ++FM++ + HN+WH AL YL L IYD+HI L+ G + Sbjct: 123 ACDLWEQILRDHPTDMLALKFSHDAYFYLGYQEQMRDSVARVYPFWTPDIPLNSYVKGIYSFGLMETNFYDQAQKLAKEALSIEPTDAWSVHTVAHVHEMRAEIKDGLEFMQQ-SEGHWKDSDMLACHNYWHWAL-YLIEKGDYEAALTIYDSHILPSLQASGTM 285
BLAST of CV884410 vs. ExPASy Swiss-Prot
Match: TTC38_XENLA (Tetratricopeptide repeat protein 38 OS=Xenopus laevis GN=ttc38 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.263e-13 Identity = 48/155 (30.97%), Postives = 72/155 (46.45%), Query Frame = 1 Query: 313 AVESHSKLLKEFPRDLLSLKRTQILCFYMGRPDLCFDIIHQVLPYNQQE----DFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEEXXXXXXXXXXFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHI 765 A + ++L+ P DLL+LK FY+G D + +VLPY + E ++ G+ +F LLE A + AK+ L + + D WS H + HV + + FM+E + H +WH AL YL L +YDNHI Sbjct: 126 AADLWERILQSHPTDLLALKFAHDCYFYLGEQRQMRDSVARVLPYWKPETPLSSYVKGMYSFGLLETNFYDQALKVAKEALAVERTDSWSVHTIAHVHEMKADLDSGLSFMQE-TENNWKGSDMLACHVYWHWAL-YLIEKGDYEAALTLYDNHI 278
BLAST of CV884410 vs. ExPASy Swiss-Prot
Match: TTC38_XENTR (Tetratricopeptide repeat protein 38 OS=Xenopus tropicalis GN=ttc38 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.240e-12 Identity = 46/155 (29.68%), Postives = 72/155 (46.45%), Query Frame = 1 Query: 313 AVESHSKLLKEFPRDLLSLKRTQILCFYMGRPDLCFDIIHQVLPY----NQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEEXXXXXXXXXXFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHI 765 A + ++L+ P DLL+LK FY+G D + +VLPY ++ G+ +F LLE A + AK+ L +++ D WS H + HV + + FM+E + H +WH AL ++E L +YDNHI Sbjct: 126 AADLWERILQNHPTDLLALKFAHDCYFYLGEQRQMRDSVARVLPYWKPGTPLSSYVKGMYSFGLLETNFYDQALKVAKEALAVDQTDSWSVHTVAHVHEMRADLDSGLAFMQE-TENNWKGSDMLACHVYWHWALYFIE-KGDYEAALTLYDNHI 278
BLAST of CV884410 vs. ExPASy Swiss-Prot
Match: TTC38_DANRE (Tetratricopeptide repeat protein 38 OS=Danio rerio GN=ttc38 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.054e-11 Identity = 47/165 (28.48%), Postives = 78/165 (47.27%), Query Frame = 1 Query: 313 AVESHSKLLKEFPRDLLSLKRTQILCFYMGRPDLCFDIIHQVLPYNQQEDFIF----GILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEEXXXXXXXXXXFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPGAV 795 A E +L + P DLL+LK FY+G D + +V+P+ + ++ G+ +F LLE +AE+ AK+ L + D WS HA+ HV + ++ + FM + HN+WH AL ++E L+I+D + + K GA+ Sbjct: 126 ACEVWECILADHPTDLLALKFAHDGFFYLGEQTQMRDSVARVMPHWKPHMPLYRQIKGMYSFGLLETRLYDEAEKMAKEALSLTPEDGWSVHAVAHVHEMKAEVEKGLNFMAS-TEKNWTVCDMLACHNYWHWALYHIE-KGNYEAALKIFDEQVSQRCVKSGAM 288 The following BLAST results are available for this feature:
BLAST of CV884410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884410 ID=CV884410; Name=CV884410; organism=Citrus sinensis; type=EST; length=851bpback to top |