CV884405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_ORYSJ (Histidyl-tRNA synthetase OS=Oryza sativa subsp. japonica GN=Os05g0150900 PE=2 SV=2) HSP 1 Score: 246.899 bits (629), Expect = 1.152e-64 Identity = 124/198 (62.63%), Postives = 159/198 (80.30%), Query Frame = -3 Query: 290 NSSAKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 883 N+ + AL++LEI F+AL+K+ I K+VFDLSLARGLDYYTGVI+EA+FKG TQVGSIAAGGRYDNL+GMF KQVPAVGVSLGIERVF IMEQ + E+NQ IRATET+VLV ++G L LAAELVSELWNA +KAE+ + ++ + A +S IPWMV+VGE E++ G VKLKN+ +QEE + R+ F + ++++L Sbjct: 589 NAGSVTALNELEILFKALDKANAIGKIVFDLSLARGLDYYTGVIYEAVFKGTTQVGSIAAGGRYDNLVGMFSGKQVPAVGVSLGIERVFAIMEQQEMEKNQ-IRATETEVLVSIIGKDLILAAELVSELWNAGIKAEFKLTTRIQNHLKYATQSGIPWMVLVGESEISSGKVKLKNLAASQEEEVDRTEFAQVLKQKL 785
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYHC_MOUSE (Histidyl-tRNA synthetase, cytoplasmic OS=Mus musculus GN=Hars PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.761e-42 Identity = 100/214 (46.73%), Postives = 141/214 (65.89%), Query Frame = -3 Query: 284 ENSSAKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIF-KGATQ-------VGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKL-PLAAELVSELWNAKVKAEYMVHK--KVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 886 +N A L DL++ F+ L DK+ FDLSLARGLDYYTGVI+EA+ + TQ VGSIAAGGRYD L+GMF K +VP VG+S+G+ER+F+I+EQ + + +R TETQVLV KL +LVSELW+A +KAE + K K++ + E+ IP + I+GE+EL +G++KL+++ + +E + R + VEEI+RR NQ Sbjct: 291 QNKQAVEGLGDLKLLFEYLILFGIDDKISFDLSLARGLDYYTGVIYEAVLLQMPTQAGEEPLGVGSIAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEASEEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVASREEVDVQREDLVEEIRRRTNQ 504
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYHC_TAKRU (Histidyl-tRNA synthetase, cytoplasmic OS=Takifugu rubripes GN=hars PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.710e-42 Identity = 101/225 (44.89%), Postives = 139/225 (61.78%), Query Frame = -3 Query: 293 ENSSAKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGA------------------TQVGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLV-----GLLGDKLPLAAELVSELWNAKVKAEYMVHK--KVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRR 886 +++ A L D+++ F L+ + DKVVFDLSLARGLDYYTG+I+EAI A VGS+A GGRYD L+GMF K +VP VGVS+GIER+F+IMEQ + + IR TE QV+V LL ++L L++ELWNA +KAE M K K++ + ES IP + I+GE+EL G+VKL+N+ T E ISR++ + EI++R Sbjct: 296 QSTQACAGLTDIKLLFSYLQLFQVTDKVVFDLSLARGLDYYTGIIYEAILTQAGVAPVAPETSNEAPTEECVTVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSIMEQKAEASTEKIRTTEVQVMVAAAQKNLLEERL----RLITELWNAGIKAELMYKKSPKLLSQLQHCEESGIPLVAILGEQELKNGVVKLRNVATRDEVDISRADLIAEIKKR 516
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYHM_HUMAN (Probable histidyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=HARS2 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.152e-42 Identity = 94/214 (43.93%), Postives = 138/214 (64.49%), Query Frame = -3 Query: 284 ENSSAKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIF--------KGATQVGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAE--YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 886 +N A L DL++ F+ L DK+ FDLSLARGLDYYTGVI+EA+ + VGS+AAGGRYD L+GMF K +VP VG+S+G+ER+F I+EQ K + + +R TETQV V L +L++ELW++ +KAE Y + K++ + + IP +VI+GE+EL EG++K++++ + +E I R NFV EIQ+RL++ Sbjct: 292 QNKQALEGLGDLKLLFEYLTLFGIADKISFDLSLARGLDYYTGVIYEAVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDPKGHKVPCVGLSIGVERIFYIVEQRMKTKGEKVRTTETQVFVATPQKNFLQERLKLIAELWDSGIKAEMLYKNNPKLLTQLHYCESTGIPLVVIIGEQELKEGVIKIRSVASREEVAIKRENFVAEIQKRLSE 505
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYHM_PONAB (Probable histidyl-tRNA synthetase, mitochondrial OS=Pongo abelii GN=HARS2 PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 8.034e-42 Identity = 94/214 (43.93%), Postives = 138/214 (64.49%), Query Frame = -3 Query: 284 ENSSAKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIF--------KGATQVGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGL-LGDKLPLAAELVSELWNAKVKAE--YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 886 +N A L DL++ F+ L DK+ FDLSLARGLDYYTGVI+EA+ + VGS+AAGGRYD L+GMF K +VP VG+S+G+ER+F I+EQ K + + +R TETQV V + L +L++ELWN+ +KAE Y + K++ + + IP +VI+GE+EL EG++K++++ + +E I R N V EIQ+RL++ Sbjct: 292 QNKQALEGLGDLKLLFEYLTLFGIADKISFDLSLARGLDYYTGVIYEAVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDPKGHKVPCVGLSIGVERIFYIVEQRMKTKGEKVRTTETQVFVATPQKNFLQERLKLIAELWNSGIKAEMLYKNNPKLLTQLHYCESTGIPLVVIIGEQELKEGVIKIRSVASREEVAIKRENLVAEIQKRLSE 505
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYHC_HUMAN (Histidyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=HARS PE=1 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 1.370e-41 Identity = 97/214 (45.33%), Postives = 138/214 (64.49%), Query Frame = -3 Query: 284 ENSSAKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIF--------KGATQVGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAE--YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 886 +N A L DL++ F+ L DK+ FDLSLARGLDYYTGVI+EA+ + VGS+AAGGRYD L+GMF K +VP VG+S+G+ER+F+I+EQ + + IR TETQVLV K L +LVSELW+A +KAE Y + K++ + E+ IP + I+GE+EL +G++KL+++ + +E + R + VEEI+RR Q Sbjct: 291 QNKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTGQ 504
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYHC_BOVIN (Histidyl-tRNA synthetase, cytoplasmic OS=Bos taurus GN=HARS PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.370e-41 Identity = 95/214 (44.39%), Postives = 139/214 (64.95%), Query Frame = -3 Query: 284 ENSSAKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIF--------KGATQVGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAE--YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 886 +N A L DL++ F+ L DK+ FDLSLARGLDYYTGVI+EA+ + VGS+AAGGRYD L+GMF K +VP VG+S+G+ER+F+I+EQ + + +R TETQVLV K L +L+SELW+A +KAE Y + K++ + E+ IP + I+GE+EL +G++KL+++ + +E + R + VEEI+RR +Q Sbjct: 291 QNKQALEGLGDLKLLFEYLTLFGIADKISFDLSLARGLDYYTGVIYEAVLLQPPARAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKVRTTETQVLVASAQKKLLEERLKLISELWDAGIKAELLYKKNPKLLNQLQYCEETGIPLVAIIGEQELKDGVIKLRSVASREEVDVRREDLVEEIKRRTSQ 504
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYHC_PONAB (Histidyl-tRNA synthetase, cytoplasmic OS=Pongo abelii GN=HARS PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.801e-41 Identity = 95/214 (44.39%), Postives = 138/214 (64.49%), Query Frame = -3 Query: 284 ENSSAKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIF--------KGATQVGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAE--YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 886 ++ A L DL++ F+ L DK+ FDLSLARGLDYYTGVI+EA+ + VGS+AAGGRYD L+GMF K +VP VG+S+G+ER+F+I+EQ + + +R TETQVLV K L +LVSELW+A +KAE Y + K++ + E+ IP + I+GE+EL +G++KL+++ + +E + R + VEEI+RR Q Sbjct: 291 QSKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKVRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELEDGVIKLRSVTSREEVDVRREDLVEEIKRRTGQ 504
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYHC_DICDI (Histidyl-tRNA synthetase, cytoplasmic OS=Dictyostelium discoideum GN=hisS PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.160e-40 Identity = 93/202 (46.04%), Postives = 128/202 (63.37%), Query Frame = -3 Query: 287 NSSAKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQV-LVGLLGDKLPLAAELVSELWNAKVKAE--YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLN 883 N A AL LE F LE ++FDLSLARGLDYYTG+I+EA+ G +VGSIAAGGRYD L+GM+G K VPAVG S+GIER+FTI+E K+ N+ IR TQV +V + D + +VSELW A + AE Y V+ K+ ++ A ES IP ++I+G+ E+ + +K + ++ I RSNF +I+ L+ Sbjct: 276 NKDATEALSQLETLFGYLECFGVTQHILFDLSLARGLDYYTGIIYEAVLTGQDRVGSIAAGGRYDGLVGMYGKKDVPAVGFSIGIERIFTILEDEYKKENKKIRENATQVFVVQMEKDLIKERLAIVSELWKAGINAEFSYKVNPKLPAQLNTADESNIPLIIIIGKSEVETNSLSVKTMHDRKQVSIERSNFTVKIKEILS 477
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYHM_BOVIN (Probable histidyl-tRNA synthetase, mitochondrial OS=Bos taurus GN=HARS2 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.409e-40 Identity = 94/214 (43.93%), Postives = 137/214 (64.02%), Query Frame = -3 Query: 284 ENSSAKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIF--------KGATQVGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGL-LGDKLPLAAELVSELWNAKVKAE--YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 886 +N A L DL++ F+ L +KV FDLSLARGLDYYTGVI+EA+ + +GS+AAGGRYD L+GMF + +VP VG+S+G+ER+F+I+EQ K + IR TETQV V + L +L++ELW+A +KAE Y + K++ + IP +VI+GE+EL EG++KL+++ + +E I R N V EIQ+RL++ Sbjct: 292 QNKQALEGLGDLKLLFEYLTLFGVAEKVSFDLSLARGLDYYTGVIYEAVLLQTPVHAEEEPLNMGSVAAGGRYDGLVGMFDPRGHKVPCVGLSIGVERIFSIVEQRIKTFGEKIRTTETQVFVATPQKNFLQERLKLIAELWDAGIKAELMYKNNPKLLPQLHYCENMGIPLVVIIGEQELKEGVIKLRSVASREEVAIKRENLVAEIQKRLSE 505 The following BLAST results are available for this feature:
BLAST of CV884405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 401
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884405 ID=CV884405; Name=CV884405; organism=Citrus sinensis; type=EST; length=891bpback to top |