CV884283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884283 vs. ExPASy Swiss-Prot
Match: RS8_MAIZE (40S ribosomal protein S8 OS=Zea mays GN=RPS8 PE=2 SV=2) HSP 1 Score: 316.235 bits (809), Expect = 1.435e-85 Identity = 167/217 (76.96%), Postives = 172/217 (79.26%), Query Frame = -3 Query: 197 DSMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVSRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAGA 847 DSMH KYELGRQPANTKLSSNKTVRR+RVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGVDIGR KSNHV+RKLEKR++ RTLDPHIEEQFGSGRLLACI+SRPGQCGRADGYILEGKELEFYMKKLQRKKGKSA A Sbjct: 6 DSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGR-KKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAVA 221
BLAST of CV884283 vs. ExPASy Swiss-Prot
Match: RS8_ORYSJ (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8 PE=2 SV=2) HSP 1 Score: 313.153 bits (801), Expect = 1.214e-84 Identity = 166/217 (76.50%), Postives = 169/217 (77.88%), Query Frame = -3 Query: 197 DSMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVSRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAGA 847 DSMH KYELGRQPANTKLSSNKTVRR+RVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGVDIGR KSNHV RKLEKRQ+ RTLD HIEEQFGSGRLLACI+SRPGQCGRADGYILEGKELEFYMKKLQRKKGK A A Sbjct: 6 DSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGR--KKKAPAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGASA 220
BLAST of CV884283 vs. ExPASy Swiss-Prot
Match: RS8_PRUAR (40S ribosomal protein S8 OS=Prunus armeniaca GN=RPS8 PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.485e-82 Identity = 162/218 (74.31%), Postives = 170/218 (77.98%), Query Frame = -3 Query: 194 DSMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVSRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAGAA 847 DSMH KYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV+IGR KSNHV+ KLEKRQ+ RTLD HIEEQFG G+LLACI+SRPGQCG+ADG ILEGKELEFYMKKLQRKKGK AGAA Sbjct: 6 DSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGR---KKKTAAAKKDTPEEGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLLACISSRPGQCGKADGDILEGKELEFYMKKLQRKKGKGAGAA 220
BLAST of CV884283 vs. ExPASy Swiss-Prot
Match: RS82_ARATH (40S ribosomal protein S8-2 OS=Arabidopsis thaliana GN=RPS8B PE=2 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 7.368e-82 Identity = 162/218 (74.31%), Postives = 168/218 (77.06%), Query Frame = -3 Query: 194 DSMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVSRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAGAA 847 DS+H KYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGVDIGR KSNHV RKLE RQ+ R LD H+EEQF SGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQ+KKGK+AGAA Sbjct: 6 DSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGVDIGR-------------KKKGEAVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210
BLAST of CV884283 vs. ExPASy Swiss-Prot
Match: RS81_ARATH (40S ribosomal protein S8-1 OS=Arabidopsis thaliana GN=RPS8A PE=2 SV=1) HSP 1 Score: 290.812 bits (743), Expect = 6.455e-78 Identity = 150/216 (69.44%), Postives = 164/216 (75.93%), Query Frame = -3 Query: 203 DSMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGR-XXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVSRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKKGKSA 847 DS+H KYE+GRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV++GR KSNH+ RK+ RQ+ R+LD HIE+QF SGRLLACI+SRPGQCGRADGYILEGKELEFYMKK+Q+KKGK A Sbjct: 6 DSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGVELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221
BLAST of CV884283 vs. ExPASy Swiss-Prot
Match: RS8_ICTPU (40S ribosomal protein S8 OS=Ictalurus punctatus GN=rps8 PE=2 SV=3) HSP 1 Score: 222.246 bits (565), Expect = 2.819e-57 Identity = 109/192 (56.77%), Postives = 138/192 (71.88%), Query Frame = -3 Query: 209 YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVSRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKKGK 784 YELGR P+NTKL K + +RVRGGN K+RALRLD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ ++ VD+APF+QWY HY + +GR +S V +K +KR+K+ + P ++EQF G+LLACI+SRPGQCGRADGY+LEGKELEFY++K++ KKGK Sbjct: 27 YELGRPPSNTKLGP-KRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCVILVDSAPFRQWYESHYALPLGR---------KKGAKLTPEEEDILNKKRSKKVQKKFDKRRKNSKISPLLDEQFQQGKLLACISSRPGQCGRADGYVLEGKELEFYLRKIKAKKGK 208
BLAST of CV884283 vs. ExPASy Swiss-Prot
Match: RS8_DANRE (40S ribosomal protein S8 OS=Danio rerio GN=rps8 PE=2 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 2.234e-54 Identity = 107/192 (55.73%), Postives = 133/192 (69.27%), Query Frame = -3 Query: 209 YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVSRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKKGK 784 YELGR ANTK+ + + IRVRGGN K+RALRLD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ +V VD+ P++QWY HY + +GR +S V +K R+K + P +EEQF G+LLACI+SRPGQCGRADGY+LEGKELEFY++K++ KKGK Sbjct: 27 YELGRPAANTKIGPRR-IHTIRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCVVLVDSTPYRQWYESHYALPLGR---------KKGAKLTPEEEEILNKKRSKKVQKKFTLRRKTAKISPLLEEQFLQGKLLACISSRPGQCGRADGYVLEGKELEFYLRKIKAKKGK 208
BLAST of CV884283 vs. ExPASy Swiss-Prot
Match: RS8_RAT (40S ribosomal protein S8 OS=Rattus norvegicus GN=Rps8 PE=1 SV=2) HSP 1 Score: 212.231 bits (539), Expect = 2.918e-54 Identity = 104/192 (54.17%), Postives = 135/192 (70.31%), Query Frame = -3 Query: 209 YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVSRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKKGK 784 YELGR ANTK+ + + +RVRGGN K+RALRLD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY HY + +GR +S + +K ++R+K+ + +EEQF G+LLACIASRPGQCGRADGY+LEGKELEFY++K++ +KGK Sbjct: 27 YELGRPAANTKIGPRR-IHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR---------KKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
BLAST of CV884283 vs. ExPASy Swiss-Prot
Match: RS8_MOUSE (40S ribosomal protein S8 OS=Mus musculus GN=Rps8 PE=1 SV=2) HSP 1 Score: 212.231 bits (539), Expect = 2.918e-54 Identity = 104/192 (54.17%), Postives = 135/192 (70.31%), Query Frame = -3 Query: 209 YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVSRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKKGK 784 YELGR ANTK+ + + +RVRGGN K+RALRLD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY HY + +GR +S + +K ++R+K+ + +EEQF G+LLACIASRPGQCGRADGY+LEGKELEFY++K++ +KGK Sbjct: 27 YELGRPAANTKIGPRR-IHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR---------KKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
BLAST of CV884283 vs. ExPASy Swiss-Prot
Match: RS8_MACFA (40S ribosomal protein S8 OS=Macaca fascicularis GN=RPS8 PE=2 SV=3) HSP 1 Score: 212.231 bits (539), Expect = 2.918e-54 Identity = 104/192 (54.17%), Postives = 135/192 (70.31%), Query Frame = -3 Query: 209 YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVSRKLEKRQKDRTLDPHIEEQFGSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKKGK 784 YELGR ANTK+ + + +RVRGGN K+RALRLD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY HY + +GR +S + +K ++R+K+ + +EEQF G+LLACIASRPGQCGRADGY+LEGKELEFY++K++ +KGK Sbjct: 27 YELGRPAANTKIGPRR-IHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR---------KKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208 The following BLAST results are available for this feature:
BLAST of CV884283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884283 ID=CV884283; Name=CV884283; organism=Citrus sinensis; type=EST; length=852bpback to top |