CX301088
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301088 vs. ExPASy Swiss-Prot
Match: YSL3_ARATH (Metal-nicotianamine transporter YSL3 OS=Arabidopsis thaliana GN=YSL3 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 3.756e-39 Identity = 73/84 (86.90%), Postives = 78/84 (92.86%), Query Frame = 3 Query: 3 TAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIP 254 TAIGCVVAPLTFFLFYKAFDVGN +GEYKAPYA+VYRNMAILGVEGFSALPQHCLQLCYGFFAFA+AANL+RD P KI W+P Sbjct: 510 TAIGCVVAPLTFFLFYKAFDVGNQEGEYKAPYALVYRNMAILGVEGFSALPQHCLQLCYGFFAFAVAANLVRDRLPDKIGNWVP 593
BLAST of CX301088 vs. ExPASy Swiss-Prot
Match: YSL2_ARATH (Metal-nicotianamine transporter YSL2 OS=Arabidopsis thaliana GN=YSL2 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.336e-36 Identity = 69/84 (82.14%), Postives = 77/84 (91.67%), Query Frame = 3 Query: 3 TAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIP 254 TAIGCVVAPLTFFLFYKAFDVGN +GEYKAPYA++YRNMAI+GV+G SALP+HCL+LCYGFFAFA+AANL RDL P K KWIP Sbjct: 502 TAIGCVVAPLTFFLFYKAFDVGNQNGEYKAPYAMIYRNMAIIGVQGPSALPKHCLELCYGFFAFAVAANLARDLLPDKPGKWIP 585
BLAST of CX301088 vs. ExPASy Swiss-Prot
Match: YSL9_ORYSJ (Probable metal-nicotianamine transporter YSL9 OS=Oryza sativa subsp. japonica GN=YSL9 PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 1.745e-36 Identity = 65/84 (77.38%), Postives = 75/84 (89.29%), Query Frame = 3 Query: 3 TAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIP 254 T +GCV++PLTFFLFY AFD+GNP+G +KAPYA+VYRNMAILGVEGFSALPQHCLQLCYGFF FA+AANL RDL P K +W+P Sbjct: 522 TVMGCVISPLTFFLFYSAFDIGNPEGYWKAPYALVYRNMAILGVEGFSALPQHCLQLCYGFFGFAVAANLTRDLCPPKYGRWVP 605
BLAST of CX301088 vs. ExPASy Swiss-Prot
Match: YSL1_ARATH (Metal-nicotianamine transporter YSL1 OS=Arabidopsis thaliana GN=YSL1 PE=2 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 2.785e-34 Identity = 59/84 (70.24%), Postives = 76/84 (90.48%), Query Frame = 3 Query: 3 TAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIP 254 T +GC+V PL+FFLFYKAFD+GNP+GE+KAPYA++YRNMAILGV+GFSALP HCLQ+CYGFF FA+ N++RDL+P KI +++P Sbjct: 512 TVVGCIVTPLSFFLFYKAFDIGNPNGEFKAPYALIYRNMAILGVQGFSALPLHCLQMCYGFFGFAVLVNVVRDLTPAKIGRFMP 595
BLAST of CX301088 vs. ExPASy Swiss-Prot
Match: YSL16_ORYSJ (Probable metal-nicotianamine transporter YSL16 OS=Oryza sativa subsp. japonica GN=YSL16 PE=2 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 5.253e-33 Identity = 61/84 (72.62%), Postives = 75/84 (89.29%), Query Frame = 3 Query: 3 TAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIP 254 T +GCVVAPLTFFLFYKAFDVG+P+G +KAPYA++YRNMAI+GVEGFSALP+HCLQLC GFFAFA+ ANL RD P++ +++P Sbjct: 513 TLMGCVVAPLTFFLFYKAFDVGDPNGYWKAPYALIYRNMAIIGVEGFSALPRHCLQLCAGFFAFAVLANLARDFLPRRYGRYMP 596
BLAST of CX301088 vs. ExPASy Swiss-Prot
Match: YSL2_ORYSJ (Metal-nicotianamine transporter YSL2 OS=Oryza sativa subsp. japonica GN=YSL2 PE=2 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 1.690e-31 Identity = 57/84 (67.86%), Postives = 73/84 (86.90%), Query Frame = 3 Query: 3 TAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIP 254 TA+GC++APLTF LFYKAFD+GNPDG +KAPYA+++RNMAILGVEGFSALP+HCL+L GFFAF++ NL+RD P+K ++P Sbjct: 512 TAMGCIIAPLTFLLFYKAFDIGNPDGYWKAPYALIFRNMAILGVEGFSALPKHCLELSAGFFAFSVLINLMRDFLPRKYRDYVP 595
BLAST of CX301088 vs. ExPASy Swiss-Prot
Match: YSL6_ARATH (Probable metal-nicotianamine transporter YSL6 OS=Arabidopsis thaliana GN=YSL6 PE=2 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 1.430e-30 Identity = 55/84 (65.48%), Postives = 74/84 (88.10%), Query Frame = 3 Query: 3 TAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIP 254 TA+GCV+APLTF+LF+ AFD+G+P+G YKAPYA+++R MAILG+EGF+ LP+HCL LCYGFF A+ NLLRD++P KI+++IP Sbjct: 512 TAMGCVIAPLTFWLFWTAFDIGDPNGPYKAPYAVIFREMAILGIEGFAELPKHCLALCYGFFIAALIVNLLRDITPPKISQFIP 595
BLAST of CX301088 vs. ExPASy Swiss-Prot
Match: YSL6_ORYSJ (Probable metal-nicotianamine transporter YSL6 OS=Oryza sativa subsp. japonica GN=YSL6 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.187e-30 Identity = 55/84 (65.48%), Postives = 72/84 (85.71%), Query Frame = 3 Query: 3 TAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIP 254 T +GC++APLTF+L++ AFD+GNPDG +KAPYA++YR M+ILGVEGFSALPQHCL +C FF AI NLLRD++PK ++K+IP Sbjct: 514 TTLGCIIAPLTFWLYWTAFDIGNPDGMFKAPYAVIYREMSILGVEGFSALPQHCLAICSVFFVAAILINLLRDVTPKSVSKFIP 597
BLAST of CX301088 vs. ExPASy Swiss-Prot
Match: YSL4_ARATH (Probable metal-nicotianamine transporter YSL4 OS=Arabidopsis thaliana GN=YSL4 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.187e-30 Identity = 56/84 (66.67%), Postives = 72/84 (85.71%), Query Frame = 3 Query: 3 TAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIP 254 TA+GC++APLTF+LF+ AFD+G+PDG YKAPYA++YR MAILGVEGF+ LP+HCL LC GFF A+ NL+RD++P KI+K IP Sbjct: 509 TAMGCIIAPLTFWLFWTAFDIGDPDGLYKAPYAVIYREMAILGVEGFAKLPKHCLALCCGFFIAALIVNLIRDMTPPKISKLIP 592
BLAST of CX301088 vs. ExPASy Swiss-Prot
Match: YSL15_ORYSJ (Iron-phytosiderophore transporter YSL15 OS=Oryza sativa subsp. japonica GN=YSL15 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.698e-29 Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 3 Query: 3 TAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIP 254 T IGC +APLTF LFY+AFD+GNPDG +KAPYA++YRNMAILG+EG SALP+HCL L GFFAFA+ N+ RD P + K +P Sbjct: 510 TGIGCFIAPLTFMLFYRAFDIGNPDGYWKAPYALIYRNMAILGIEGISALPKHCLSLSVGFFAFAVLTNVARDALPARYKKLVP 593 The following BLAST results are available for this feature:
BLAST of CX301088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301088 ID=CX301088; Name=CX301088; organism=Citrus sinensis; type=EST; length=254bpback to top |