CX300934
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300934 vs. ExPASy Swiss-Prot
Match: RL7A2_ARATH (60S ribosomal protein L7a-2 OS=Arabidopsis thaliana GN=RPL7AB PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 1.659e-42 Identity = 84/126 (66.67%), Postives = 104/126 (82.54%), Query Frame = 2 Query: 8 RDLSRFVRWPKNVRLQRQKKILTQRLKVPPAINQFRRTLDKNQAAELFKLLVKYQPENKEAKKIRLEAKAAAIANKEPVQTVVPPPTIKFGLKHVTSLIEKKKAKLVVIAHDVDPIELVVWLPALC 385 +DLSR+++WPK++RLQRQK+IL QRLKVPPA+NQF +TLDKN A LFK+L+KY+PE+K AKK RL KA A A +P ++ P +K+GL HVT LIE+ KA+LVVIAHDVDPIELVVWLPALC Sbjct: 40 KDLSRYIKWPKSIRLQRQKRILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAAKKERLLNKAQAEAEGKPAES-KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALC 164
BLAST of CX300934 vs. ExPASy Swiss-Prot
Match: RL7A1_ARATH (60S ribosomal protein L7a-1 OS=Arabidopsis thaliana GN=RPL7AA PE=2 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 2.167e-42 Identity = 84/126 (66.67%), Postives = 104/126 (82.54%), Query Frame = 2 Query: 8 RDLSRFVRWPKNVRLQRQKKILTQRLKVPPAINQFRRTLDKNQAAELFKLLVKYQPENKEAKKIRLEAKAAAIANKEPVQTVVPPPTIKFGLKHVTSLIEKKKAKLVVIAHDVDPIELVVWLPALC 385 +DLSR+++WPK++RLQRQK+IL QRLKVPPA+NQF +TLDKN A LFK+L+KY+PE+K AKK RL KA A A +P ++ P +K+GL HVT LIE+ KA+LVVIAHDVDPIELVVWLPALC Sbjct: 41 KDLSRYIKWPKSIRLQRQKRILKQRLKVPPALNQFTKTLDKNLATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPSES-KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALC 165
BLAST of CX300934 vs. ExPASy Swiss-Prot
Match: RL7A_ORYSJ (60S ribosomal protein L7a OS=Oryza sativa subsp. japonica GN=RPL7A PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.337e-41 Identity = 84/126 (66.67%), Postives = 101/126 (80.16%), Query Frame = 2 Query: 8 RDLSRFVRWPKNVRLQRQKKILTQRLKVPPAINQFRRTLDKNQAAELFKLLVKYQPENKEAKKIRLEAKAAAIANKEPVQTVVPPPTIKFGLKHVTSLIEKKKAKLVVIAHDVDPIELVVWLPALC 385 +DL RFV+WPK VR+QRQ++IL QRLKVPPA+NQF RTLDKN A LFK+L+KY+PE+K AKK RL +A A A + V+ P +K+GL HVT LIE+ KA+LVVIAHDVDPIELVVWLPALC Sbjct: 42 KDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTVE-AKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALC 166
BLAST of CX300934 vs. ExPASy Swiss-Prot
Match: RL8_SCHPO (60S ribosomal protein L8 OS=Schizosaccharomyces pombe GN=rpl8 PE=1 SV=3) HSP 1 Score: 159.073 bits (401), Expect = 6.524e-39 Identity = 82/127 (64.57%), Postives = 100/127 (78.74%), Query Frame = 2 Query: 8 RDLSRFVRWPKNVRLQRQKKILTQRLKVPPAINQFRRTLDKNQAAELFKLLVKYQPENKEAKKIRLEAKAAAIANKEPVQTVVPPP-TIKFGLKHVTSLIEKKKAKLVVIAHDVDPIELVVWLPALC 385 RDLSRFV+WP+ +RLQR++KIL RLKVPPAI QF++TLDKN A ++FKLL KY+PE KK RL A+A A+AN + Q V P +K+GL HV +LIE KKAKLV+IA DVDPIELVV+LPALC Sbjct: 44 RDLSRFVKWPEYIRLQRRRKILNLRLKVPPAIAQFQKTLDKNTATQVFKLLNKYRPETAAEKKQRLVAEAEAVANGKSAQDVSKKPYNVKYGLNHVVALIEAKKAKLVLIASDVDPIELVVFLPALC 170
BLAST of CX300934 vs. ExPASy Swiss-Prot
Match: RL8B_YEAST (60S ribosomal protein L8-B OS=Saccharomyces cerevisiae GN=RPL8B PE=1 SV=3) HSP 1 Score: 156.762 bits (395), Expect = 3.238e-38 Identity = 83/127 (65.35%), Postives = 98/127 (77.17%), Query Frame = 2 Query: 8 RDLSRFVRWPKNVRLQRQKKILTQRLKVPPAINQFRRTLDKNQAAELFKLLVKYQPENKEAKKIRLEAKAAAIANKEPVQTVVPPP-TIKFGLKHVTSLIEKKKAKLVVIAHDVDPIELVVWLPALC 385 R+LSR+V+WP+ VRLQRQKKIL+ RLKVPP I QF+ TLD+N AAE FKL KY+PE KK RL +AAAIA + Q P P +K+GL HV SLIE KKAKLV+IA+DVDPIELVV+LPALC Sbjct: 44 RNLSRYVKWPEYVRLQRQKKILSIRLKVPPTIAQFQYTLDRNTAAETFKLFNKYRPETAAEKKERLTKEAAAIAEGKSKQDASPKPYAVKYGLNHVVSLIENKKAKLVLIANDVDPIELVVFLPALC 170
BLAST of CX300934 vs. ExPASy Swiss-Prot
Match: RL8A_YEAST (60S ribosomal protein L8-A OS=Saccharomyces cerevisiae GN=RPL8A PE=1 SV=4) HSP 1 Score: 154.066 bits (388), Expect = 2.099e-37 Identity = 80/127 (62.99%), Postives = 98/127 (77.17%), Query Frame = 2 Query: 8 RDLSRFVRWPKNVRLQRQKKILTQRLKVPPAINQFRRTLDKNQAAELFKLLVKYQPENKEAKKIRLEAKAAAIANKEPVQTVVPPP-TIKFGLKHVTSLIEKKKAKLVVIAHDVDPIELVVWLPALC 385 R+LSR+V+WP+ VR+QRQKKIL+ RLKVPP I QF+ TLD+N AAE FKL KY+PE KK RL +AAA+A + Q P P +K+GL HV +LIE KKAKLV+IA+DVDPIELVV+LPALC Sbjct: 44 RNLSRYVKWPEYVRVQRQKKILSIRLKVPPTIAQFQYTLDRNTAAETFKLFNKYRPETAAEKKERLTKEAAAVAEGKSKQDASPKPYAVKYGLNHVVALIENKKAKLVLIANDVDPIELVVFLPALC 170
BLAST of CX300934 vs. ExPASy Swiss-Prot
Match: RL7A_DROME (60S ribosomal protein L7a OS=Drosophila melanogaster GN=RpL7A PE=2 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 2.320e-36 Identity = 77/126 (61.11%), Postives = 96/126 (76.19%), Query Frame = 2 Query: 8 RDLSRFVRWPKNVRLQRQKKILTQRLKVPPAINQFRRTLDKNQAAELFKLLVKYQPENKEAKKIRLEAKAAAIANKEPVQTVVPPPTIKFGLKHVTSLIEKKKAKLVVIAHDVDPIELVVWLPALC 385 RDLSRFVRWPK +R+QRQK +L +RLKVPP I+QF +TLDK A +LFKLL KY+PE+ AKK+RL+ A A A + V+ P + G VT LIE+KKA+LVVIAHDVDP+ELV++LPALC Sbjct: 54 RDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALC 179
BLAST of CX300934 vs. ExPASy Swiss-Prot
Match: RL7A_TAKRU (60S ribosomal protein L7a OS=Takifugu rubripes GN=rpl7a PE=3 SV=3) HSP 1 Score: 149.058 bits (375), Expect = 6.751e-36 Identity = 74/126 (58.73%), Postives = 95/126 (75.40%), Query Frame = 2 Query: 8 RDLSRFVRWPKNVRLQRQKKILTQRLKVPPAINQFRRTLDKNQAAELFKLLVKYQPENKEAKKIRLEAKAAAIANKEPVQTVVPPPTIKFGLKHVTSLIEKKKAKLVVIAHDVDPIELVVWLPALC 385 RDL+RFV+WP+ +RLQRQ+ IL +RLKVPPAINQF + LD+ A +LFKL KY+PE K+ KK RL A+A A + PP ++ G+ +TSL+E KKA+LVVIAHDVDPIELV++LPALC Sbjct: 49 RDLTRFVKWPRYIRLQRQRSILYKRLKVPPAINQFTQALDRQTATQLFKLAHKYRPETKQEKKKRLLARAEQKAAGKGDAPTKRPPVLRAGVNTITSLVENKKAQLVVIAHDVDPIELVIFLPALC 174
BLAST of CX300934 vs. ExPASy Swiss-Prot
Match: RL7A_CHICK (60S ribosomal protein L7a OS=Gallus gallus GN=RPL7A PE=2 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 4.376e-35 Identity = 74/126 (58.73%), Postives = 94/126 (74.60%), Query Frame = 2 Query: 8 RDLSRFVRWPKNVRLQRQKKILTQRLKVPPAINQFRRTLDKNQAAELFKLLVKYQPENKEAKKIRLEAKAAAIANKEPVQTVVPPPTIKFGLKHVTSLIEKKKAKLVVIAHDVDPIELVVWLPALC 385 RDL+RFV+WP+ +RLQRQ+ IL +RLKVPPAINQF + LD+ A +L KL KY+PE K+ KK RL A+A A + PP ++ G+ VT+L+E KKA+LVVIAHDVDPIELVV+LPALC Sbjct: 49 RDLTRFVKWPRYIRLQRQRSILYKRLKVPPAINQFSQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEQKAAGKGDTPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALC 174
BLAST of CX300934 vs. ExPASy Swiss-Prot
Match: RL7A_ICTPU (60S ribosomal protein L7a OS=Ictalurus punctatus GN=rpl7a PE=2 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 5.715e-35 Identity = 75/126 (59.52%), Postives = 93/126 (73.81%), Query Frame = 2 Query: 8 RDLSRFVRWPKNVRLQRQKKILTQRLKVPPAINQFRRTLDKNQAAELFKLLVKYQPENKEAKKIRLEAKAAAIANKEPVQTVVPPPTIKFGLKHVTSLIEKKKAKLVVIAHDVDPIELVVWLPALC 385 RDL+RFV+WP+ VRLQR IL +RLKVPPAINQF + LD+ A +LFKL KY+PE K+ KK RL A+A A + PP ++ G+ VTSL+E KKA+LVVIAHDVDPIELV++LPALC Sbjct: 49 RDLTRFVKWPRYVRLQRHGSILYKRLKVPPAINQFNQALDRQTATQLFKLAHKYRPETKQEKKRRLLARAEQKAAGKGDVPTKRPPVVRAGVNTVTSLVESKKAQLVVIAHDVDPIELVLFLPALC 174 The following BLAST results are available for this feature:
BLAST of CX300934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300934 ID=CX300934; Name=CX300934; organism=Citrus sinensis; type=EST; length=385bpback to top |