CX300923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_ORYSJ (40S ribosomal protein S7 OS=Oryza sativa subsp. japonica GN=RPS7 PE=2 SV=2) HSP 1 Score: 207.608 bits (527), Expect = 1.593e-53 Identity = 101/121 (83.47%), Postives = 112/121 (92.56%), Query Frame = 1 Query: 25 TTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVH 387 T ++KIQKDK EPTEFE+TVAQA FDLEN NQELKSDLKDLYIN A+QMD+ GNRKA+++YVPYRLRKAY+KIH RLVRELEKKFSGKDVVL+ATRRIVRPPKKGSAV RPR+RTLTAVH Sbjct: 3 TARRKIQKDKGLEPTEFEDTVAQAFFDLENGNQELKSDLKDLYINGAVQMDLPGNRKAVIIYVPYRLRKAYKKIHVRLVRELEKKFSGKDVVLVATRRIVRPPKKGSAVVRPRTRTLTAVH 123
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_AVIMR (40S ribosomal protein S7 OS=Avicennia marina GN=RPS7 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 2.718e-53 Identity = 101/121 (83.47%), Postives = 113/121 (93.39%), Query Frame = 1 Query: 25 TTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVH 387 T +KI KDKDAEPTEFEE VAQALFD ENTNQE+KSDLKDLYIN A+Q+DVSG +KA+V++VPYRLRK++RKIH RLVRELEKKFSGK+VVLIATRRI+RPPKKGSAVQRPRSRTLTAVH Sbjct: 3 TALQKIHKDKDAEPTEFEENVAQALFDFENTNQEIKSDLKDLYINSALQIDVSGGKKAVVIHVPYRLRKSFRKIHPRLVRELEKKFSGKEVVLIATRRILRPPKKGSAVQRPRSRTLTAVH 123
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS72_ARATH (40S ribosomal protein S7-2 OS=Arabidopsis thaliana GN=RPS7B PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 3.924e-52 Identity = 97/119 (81.51%), Postives = 110/119 (92.44%), Query Frame = 1 Query: 31 KKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVH 387 + KI KDK PTEFEE V QALFDLENTNQELKS+LKDLYINQA+QMD+SGNRKA+V+YVP+RLRKA+RKIH RLVRELEKKFSGKDV+ +ATRRI+RPPKKGSAVQRPR+RTLT+VH Sbjct: 5 QNKIHKDKGVAPTEFEEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKAVVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVIFVATRRIMRPPKKGSAVQRPRNRTLTSVH 123
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS73_ARATH (40S ribosomal protein S7-3 OS=Arabidopsis thaliana GN=RPS7C PE=2 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 5.126e-52 Identity = 96/121 (79.34%), Postives = 113/121 (93.39%), Query Frame = 1 Query: 25 TTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVH 387 + + KI+KDK+AEPTE EE VAQALFDLENTNQELKS+LKDLYINQA+ MD+SGNRKA+V+YVP+RLRKA+RKIH RLVRELEKKFSGKDV+ + TRRI+RPPKKG+AVQRPR+RTLT+VH Sbjct: 3 SAQNKIKKDKNAEPTECEEQVAQALFDLENTNQELKSELKDLYINQAVHMDISGNRKAVVIYVPFRLRKAFRKIHPRLVRELEKKFSGKDVIFVTTRRIMRPPKKGAAVQRPRNRTLTSVH 123
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_SECCE (40S ribosomal protein S7 OS=Secale cereale GN=RPS7 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 6.694e-52 Identity = 99/121 (81.82%), Postives = 111/121 (91.74%), Query Frame = 1 Query: 25 TTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVH 387 T +KKIQKDK EP+EFE+TVAQA FDLEN NQELKSD+KDLYIN A QMDV+GNRKA+V++VPYRLRK +RKIH RLVRELEKKFSGKDVV++ATRRIVRPPKKGSAV RPR+RTLTAVH Sbjct: 3 TARKKIQKDKGLEPSEFEDTVAQAFFDLENGNQELKSDVKDLYINAAFQMDVAGNRKAVVIHVPYRLRKNFRKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVVRPRTRTLTAVH 123
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_BRAOL (40S ribosomal protein S7 OS=Brassica oleracea GN=RPS7 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 6.694e-52 Identity = 96/121 (79.34%), Postives = 110/121 (90.91%), Query Frame = 1 Query: 25 TTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVH 387 + + KI KDK PTEFEE VAQA FDLENTNQELKSDLKDLYINQA+ MD++GNRKA+V+YVP+RLRKA+RKIHSRLVRELEKKFSG DV+ +ATRRI+RPPKKGSAVQRPR+RTLT+VH Sbjct: 3 SAQNKIHKDKGVAPTEFEERVAQAFFDLENTNQELKSDLKDLYINQAVSMDIAGNRKAVVIYVPFRLRKAFRKIHSRLVRELEKKFSGNDVIFVATRRIMRPPKKGSAVQRPRNRTLTSVH 123
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_HORVU (40S ribosomal protein S7 OS=Hordeum vulgare GN=RPS7 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 4.797e-50 Identity = 99/121 (81.82%), Postives = 109/121 (90.08%), Query Frame = 1 Query: 25 TTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVH 387 T +KKIQKDK EP+EFE+TVAQA FDLEN NQELKSDLKDLYIN AIQMDV GNRKA+V++VPYRLRK +RKIH RLVRELE + SGKDVV +ATRRIVRPPKKGSAVQRPR+RTLTAVH Sbjct: 3 TARKKIQKDKGVEPSEFEDTVAQAFFDLENGNQELKSDLKDLYINTAIQMDVVGNRKAVVIHVPYRLRKPFRKIHVRLVRELE-RVSGKDVVFVATRRIVRPPKKGSAVQRPRTRTLTAVH 122
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS71_ARATH (40S ribosomal protein S7-1 OS=Arabidopsis thaliana GN=RPS7A PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 5.864e-48 Identity = 93/121 (76.86%), Postives = 107/121 (88.43%), Query Frame = 1 Query: 25 TTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVH 387 + + KI K+K E +E +E VAQA FDLENTNQELKS+LKDLY+N A+Q+D+SG RKAIVV VPYRLRKAYRKIH RLVRELEKKFSGKDV+LIATRRIVRPPKKGSA +RPR+RTLT+VH Sbjct: 3 SAQHKIHKEKGVELSELDEQVAQAFFDLENTNQELKSELKDLYVNSAVQVDISGGRKAIVVNVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAKRPRNRTLTSVH 123
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_ICTPU (40S ribosomal protein S7 OS=Ictalurus punctatus GN=rps7 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.398e-25 Identity = 64/125 (51.20%), Postives = 86/125 (68.80%), Query Frame = 1 Query: 25 TTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV----QRPRSRTLTAVH 387 ++ KI K +P EFE ++QAL +LE N +LK+ L++L I A +++V G+RKAI+++VP KA++KI RLVRELEKKFSGK VV IA RRI+ P + S +RPRSRTLTAVH Sbjct: 3 SSSAKIVKANGEKPDEFESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGSRKAIIIFVPVPQLKAFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVH 126
BLAST of CX300923 vs. ExPASy Swiss-Prot
Match: RS7_DANRE (40S ribosomal protein S7 OS=Danio rerio GN=rps7 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.398e-25 Identity = 63/125 (50.40%), Postives = 86/125 (68.80%), Query Frame = 1 Query: 25 TTKKKIQKDKDAEPTEFEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV----QRPRSRTLTAVH 387 +T KI K +P EFE ++QAL +LE N +LK+ L++L+I A +++V G+RKAI+++VP K+++KI RLVRELEKKFSGK VV IA RRI+ P + S +RPRSRTLT VH Sbjct: 3 STSAKIVKPNGEKPDEFESGISQALLELE-MNSDLKAQLRELHITAAKEIEVGGSRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTNVH 126 The following BLAST results are available for this feature:
BLAST of CX300923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300923 ID=CX300923; Name=CX300923; organism=Citrus sinensis; type=EST; length=388bpback to top |