CX672120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10C_ARATH (20 kDa chaperonin, chloroplastic OS=Arabidopsis thaliana GN=CPN21 PE=1 SV=2) HSP 1 Score: 355.525 bits (911), Expect = 2.300e-97 Identity = 183/253 (72.33%), Postives = 207/253 (81.82%), Query Frame = 2 Query: 110 MATAQLTASSIKVPARSLTSFDGLRPSSVKFASVG-GAASQRSFRRLXXXXXXXXXPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 865 MA QLTAS + + ARSL S DGLR SSVKF+S+ G Q FRRL PKYTSIKPLGDRVLVKIK EEKT GGI LPS AQ+KPQ GEVVAVGEG+T+GK K+DI+V G Q+IYSKYAGTE+EFN HLI++EDD+VGILET++IKDLKPLNDRVFIKVAEAEE TAGGLLLTE +KEKPSIGTVIAVGPG LDEEG PL ++ G+TV+YSKYAGNDFKG DG+NYIALRAS+VMA+LS Sbjct: 1 MAATQLTASPVTMSARSLASLDGLRASSVKFSSLKPGTLRQSQFRRLVVKAASVVAPKYTSIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGKNKIDITVPTGAQIIYSKYAGTEVEFNDVKHLILKEDDIVGILETEDIKDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAILS 253
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10C_SPIOL (20 kDa chaperonin, chloroplastic OS=Spinacia oleracea GN=CPN21 PE=2 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 7.183e-83 Identity = 156/256 (60.94%), Postives = 194/256 (75.78%), Query Frame = 2 Query: 110 MATAQLTASSIKVPARSLTSFDGLRPSS----VKFASVGGAASQRSFRRLXXXXXXXXXPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 865 MA LT++S + +L SF+GLR +S + + + + RSFR L KYTS+KPLGDRVL+K K VEEKT GIFLP+AAQ KPQ+GEVVA+G GK VG KL ++VK G +V+YSKY GTE+E +G++HLIV+EDD++GILETD++KDLKPLNDR+ IKVAE E T+GGLLL E+SKEKPS GTV+A GPG LDEEGNR PL + GNTV+YSKYAGNDFKG DG++Y+ LR S+VMAVLS Sbjct: 1 MAATHLTSTS-SLTINTLPSFEGLRSASGISKINVSVAYPSFTSRSFRGLVVRAASITTSKYTSVKPLGDRVLIKTKIVEEKTTSGIFLPTAAQKKPQSGEVVAIGSGKKVGDKKLPVAVKTGAEVVYSKYTGTEIEVDGSSHLIVKEDDIIGILETDDVKDLKPLNDRLLIKVAEVENKTSGGLLLAESSKEKPSFGTVVATGPGVLDEEGNRIPLPVCSGNTVLYSKYAGNDFKGVDGSDYMVLRVSDVMAVLS 255
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_NATTJ (10 kDa chaperonin OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=groS PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.145e-22 Identity = 49/94 (52.13%), Postives = 72/94 (76.60%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 565 ++KPLGDR+++KI EEKT+ GI LP A+ KPQ GEVVAVG GKT+ +K++ VK G +V+YSK+AG E+E +G +LI+R+DD++ ++E Sbjct: 2 NLKPLGDRIVIKILEAEEKTESGIVLPEKAKEKPQEGEVVAVGSGKTLDDGSKVEPEVKAGDKVVYSKFAGNEVEVDGEEYLIMRQDDILAVIE 95 HSP 2 Score: 86.2705 bits (212), Expect = 2.603e-16 Identity = 41/94 (43.62%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 581 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862 +LKPL DR+ IK+ EAEE T G++L E +KEKP G V+AVG G ++G++ + G+ V+YSK+AGN+ + DG Y+ +R +++AV+ Sbjct: 2 NLKPLGDRIVIKILEAEEKTESGIVLPEKAKEKPQEGEVVAVGSGKTLDDGSKVEPEVKAGDKVVYSKFAGNEVE-VDGEEYLIMRQDDILAVI 94
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_THEPX (10 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groS PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.071e-22 Identity = 48/92 (52.17%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 565 +KPLGDRV+VK+ EE T GG+ LP A+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G +L++RE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 83.5741 bits (205), Expect = 1.687e-15 Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 584 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862 LKPL DRV +KV +AEE T GG++L +KEKP G V+AVG G +G + L + G+ V++SKYAG + K DG Y+ LR S+++A++ Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQY-IDGKKVELEVKVGDRVIFSKYAGTEVK-LDGEEYLLLRESDILAII 93
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_THEP3 (10 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=groS PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.071e-22 Identity = 48/92 (52.17%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 565 +KPLGDRV+VK+ EE T GG+ LP A+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G +L++RE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 83.5741 bits (205), Expect = 1.687e-15 Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 584 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862 LKPL DRV +KV +AEE T GG++L +KEKP G V+AVG G +G + L + G+ V++SKYAG + K DG Y+ LR S+++A++ Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQY-IDGKKVELEVKVGDRVIFSKYAGTEVK-LDGEEYLLLRESDILAII 93
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_THEBR (10 kDa chaperonin OS=Thermoanaerobacter brockii GN=groS PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.071e-22 Identity = 48/92 (52.17%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 565 +KPLGDRV+VK+ EE T GG+ LP A+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G +L++RE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 83.5741 bits (205), Expect = 1.687e-15 Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 584 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862 LKPL DRV +KV +AEE T GG++L +KEKP G V+AVG G +G + L + G+ V++SKYAG + K DG Y+ LR S+++A++ Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEY-IDGKKVELEVKVGDRVIFSKYAGTEVK-LDGEEYLLLRESDILAII 93
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_RHOMR (10 kDa chaperonin OS=Rhodothermus marinus GN=groS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.235e-22 Identity = 46/95 (48.42%), Postives = 70/95 (73.68%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILETDE 574 IKPL DRV++K + EEKT+ G+++P A+ KPQ G V+AVG G+ K+++SVK G +V+Y KYAGTE+ +G +LI+RE D++GI+E ++ Sbjct: 6 IKPLSDRVVIKPEPPEEKTESGLYIPDTAKEKPQRGTVIAVGPGRVENGTKIEMSVKEGDKVLYGKYAGTEITIDGEEYLIMRETDILGIIEEEK 100 HSP 2 Score: 80.4925 bits (197), Expect = 1.428e-14 Identity = 40/93 (43.01%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 584 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862 +KPL+DRV IK EE T GL + + +KEKP GTVIAVGPG + E G + +S+ G+ V+Y KYAG + DG Y+ +R ++++ ++ Sbjct: 6 IKPLSDRVVIKPEPPEEKTESGLYIPDTAKEKPQRGTVIAVGPGRV-ENGTKIEMSVKEGDKVLYGKYAGTEIT-IDGEEYLIMRETDILGII 96
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_THEVL (10 kDa chaperonin OS=Thermosynechococcus vulcanus GN=groS PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 2.057e-21 Identity = 46/96 (47.92%), Postives = 71/96 (73.96%), Query Frame = 2 Query: 575 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862 + +KPL DR+F+KVAE+EE TAGG+LL + ++EKP +G V AVGPG L E+G R+P+ + G+ V+YSKYAG + K + G +Y+ L +++A++ Sbjct: 8 VSTVKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDVKVGDKVLYSKYAGTEVKLA-GEDYVLLSEKDILAIV 102 HSP 2 Score: 92.8189 bits (229), Expect = 2.781e-18 Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = 2 Query: 284 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLD-ISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 562 +++KPLGDR+ VK+ EE+T GGI LP A+ KPQ GEV AVG GK K + VK G +V+YSKYAGTE++ G +++++ E D++ I+ Sbjct: 9 STVKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDVKVGDKVLYSKYAGTEVKLAGEDYVLLSEKDILAIV 102
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_THEEB (10 kDa chaperonin OS=Thermosynechococcus elongatus (strain BP-1) GN=groS PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 2.057e-21 Identity = 46/96 (47.92%), Postives = 71/96 (73.96%), Query Frame = 2 Query: 575 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862 + +KPL DR+F+KVAE+EE TAGG+LL + ++EKP +G V AVGPG L E+G R+P+ + G+ V+YSKYAG + K + G +Y+ L +++A++ Sbjct: 8 VSTVKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDVKVGDKVLYSKYAGTEVKLA-GEDYVLLSEKDILAIV 102 HSP 2 Score: 92.8189 bits (229), Expect = 2.781e-18 Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = 2 Query: 284 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLD-ISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 562 +++KPLGDR+ VK+ EE+T GGI LP A+ KPQ GEV AVG GK K + VK G +V+YSKYAGTE++ G +++++ E D++ I+ Sbjct: 9 STVKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDVKVGDKVLYSKYAGTEVKLAGEDYVLLSEKDILAIV 102
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_DESVV (10 kDa chaperonin OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=groS PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.687e-21 Identity = 49/94 (52.13%), Postives = 68/94 (72.34%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 565 ++KPL DRVLVK EEKT GG+++P A+ KP GEVVA G GKT KL ++VK G V+++KYAGTE++ +G HL++REDD++ I+E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIKIDGVEHLVMREDDILAIIE 95 HSP 2 Score: 89.7373 bits (221), Expect = 2.354e-17 Identity = 40/94 (42.55%), Postives = 65/94 (69.15%), Query Frame = 2 Query: 581 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G V+A GPG ++G +++ G+ V+++KYAG + K DG ++ +R +++A++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIK-IDGVEHLVMREDDILAII 94 The following BLAST results are available for this feature:
BLAST of CX672120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672120 ID=CX672120; Name=CX672120; organism=Citrus sinensis; type=EST; length=890bpback to top |