CX671816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671816 vs. ExPASy Swiss-Prot
Match: PHR2_ARATH (Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana GN=PHR2 PE=2 SV=2) HSP 1 Score: 293.893 bits (751), Expect = 6.492e-79 Identity = 154/231 (66.67%), Postives = 179/231 (77.49%), Query Frame = 3 Query: 75 KQNLENPENHSNEEQNPLATIPSQSPFATLSLSFSLPQVLPANTFFIQPKISTLFSHQPNKVKAPTQAXXXXXXXXXXXXXXXXXXXXFKSTLSANPLQSPLSLGPHRPLDPNNGAAIRRASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKS 767 ++NL NPE S EEQNPLA S P A+LSL+ + P++T F++ LF+H PNKVK PTQA FKST++ANPLQSPLS+ P RP+DP++ AA+RRA++VWFRNDLRVHDNE LN+AN+E VSVLPVYCFDPRDYGKSSSGFDKTGP+RA FLIESVS+LRKNLQARGS+LVVRVGKPE VLVELAK IGADAVYAHREVSHDEVK+ Sbjct: 7 EENL-NPETKSAEEQNPLAIFHSSLPIASLSLT-----LFPSSTQFLK-----LFAHHPNKVKIPTQASSLTHLSLSSVSPFPSSRISFKSTIAANPLQSPLSIVPRRPVDPSSAAALRRAAVVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGFDKTGPFRAQFLIESVSELRKNLQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSHDEVKA 226
BLAST of CX671816 vs. ExPASy Swiss-Prot
Match: CRYD_GLOVI (Cryptochrome DASH OS=Gloeobacter violaceus GN=cry PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.381e-27 Identity = 56/107 (52.34%), Postives = 81/107 (75.70%), Query Frame = 3 Query: 441 IVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEV 761 +VW+RNDLRVHD+E L +A +++ V+ +YCFDPR +GK+ GF+KTGP+RA FL+ESV+DLR++L+ GSDL+VR G PE V+ L + AV+ H EV+ +E+ Sbjct: 7 LVWYRNDLRVHDHEPLTSALHKNARVVALYCFDPRQFGKAPFGFEKTGPFRARFLLESVADLRRSLRQLGSDLLVRRGHPEEVIPALVSELEIAAVHYHGEVTSEEL 113
BLAST of CX671816 vs. ExPASy Swiss-Prot
Match: CRYD_SOLLC (Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum GN=CRYD PE=3 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 7.050e-25 Identity = 59/110 (53.64%), Postives = 77/110 (70.00%), Query Frame = 3 Query: 438 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSS-GFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVK 764 +IVWFRNDLRV DNE+L A S ++LPVYC DPR +G + G KTG RA F+IE ++DL++NL RG DL+++ GKPE ++ LAKA A VYAH+E +EVK Sbjct: 80 AIVWFRNDLRVLDNEALLRAWVSSEAILPVYCVDPRLFGTTHYFGMPKTGALRAQFIIECLNDLKRNLVKRGLDLLIQHGKPEDIVPSLAKAYKAHTVYAHKETCSEEVK 189
BLAST of CX671816 vs. ExPASy Swiss-Prot
Match: CRYD_SYNY3 (Cryptochrome DASH OS=Synechocystis sp. (strain PCC 6803) GN=cry PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.203e-24 Identity = 50/107 (46.73%), Postives = 77/107 (71.96%), Query Frame = 3 Query: 441 IVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEV 761 +VWFRNDLR+HD+E L+ A +++ VYC+DPR + ++ GF KTGP+R++FL +SV +L ++LQ G+ L+V G PE V+ ++AK I A +Y HREV+ +E+ Sbjct: 9 LVWFRNDLRLHDHEPLHRALKSGLAITAVYCYDPRQFAQTHQGFAKTGPWRSNFLQQSVQNLAESLQKVGNKLLVTTGLPEQVIPQIAKQINAKTIYYHREVTQEEL 115
BLAST of CX671816 vs. ExPASy Swiss-Prot
Match: CRYD_ORYSJ (Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=CRYD PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24 Identity = 59/110 (53.64%), Postives = 76/110 (69.09%), Query Frame = 3 Query: 438 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSS--GFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEV 761 +IVWFRNDLRV DNE++ A S +VLPVYC DPR S+ GF KTG RA FLIE + DL++NL +G DL++R GKPE +L +AKA+ A VYAH+E +E+ Sbjct: 86 AIVWFRNDLRVLDNEAVVRAWAASDAVLPVYCVDPRISAGSTHYFGFPKTGALRAQFLIECLEDLKRNLTKQGLDLLIRHGKPEDILPSIAKAVTAHTVYAHKETCSEEL 195
BLAST of CX671816 vs. ExPASy Swiss-Prot
Match: CRYD_ARATH (Cryptochrome DASH, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=CRYD PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 2.268e-23 Identity = 56/109 (51.38%), Postives = 74/109 (67.89%), Query Frame = 3 Query: 438 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSS-GFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEV 761 +I+WFRNDLRV DN++L A + S ++LPVYC DPR + + F KTG R FL+E + DLRKNL RG +L++R GKPE +L LAK GA V+AH+E +EV Sbjct: 86 TILWFRNDLRVLDNDALYKAWSSSDTILPVYCLDPRLFHTTHFFNFPKTGALRGGFLMECLVDLRKNLMKRGLNLLIRSGKPEEILPSLAKDFGARTVFAHKETCSEEV 194
BLAST of CX671816 vs. ExPASy Swiss-Prot
Match: CRYD_XENLA (Cryptochrome DASH OS=Xenopus laevis GN=cry-dash PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.528e-22 Identity = 54/111 (48.65%), Postives = 73/111 (65.77%), Query Frame = 3 Query: 432 RASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDY-GKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIG-ADAVYAHREVSHDE 758 R I RNDLR+HDNE L+ A+ + ++P+YCFDPR Y G F KTGP+R FL+ESV DLR L+ +GS+L++R GKPE V+ +L K +G AV H E + +E Sbjct: 6 RVIICLLRNDLRLHDNEVLHWAHRNADQIVPLYCFDPRHYVGTHYFNFPKTGPHRLKFLLESVRDLRITLKKKGSNLLLRRGKPEEVIEDLVKQLGNVSAVTLHEEATKEE 116
BLAST of CX671816 vs. ExPASy Swiss-Prot
Match: CRYD_NATPD (Cryptochrome DASH OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=cry PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.528e-22 Identity = 54/107 (50.47%), Postives = 75/107 (70.09%), Query Frame = 3 Query: 438 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDE 758 ++VWFR+DLRV DN +L A + +V+PVY FDP Y +S G KTG +RA F ++V+DLR +L+ RG DL+VR G+P TV+ ELA+ GADAVYA + + +E Sbjct: 4 AVVWFRDDLRVTDNPTLADAVAAAETVIPVYTFDPDRYTESEYGPPKTGGHRAVFRRQAVADLRASLRDRGGDLLVRSGRPATVVPELAQRAGADAVYAQTKPATEE 110
BLAST of CX671816 vs. ExPASy Swiss-Prot
Match: CRYD_DANRE (Cryptochrome DASH OS=Danio rerio GN=cry-dash PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.772e-21 Identity = 54/111 (48.65%), Postives = 71/111 (63.96%), Query Frame = 3 Query: 432 RASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDY-GKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYA-HREVSHDE 758 R I RNDLR+HDNE + A + ++P+YCFDPR Y G F KTGP+R FL++SV DLR L+ GS L+VR GKPE V+ EL K +G+ + A H EV+ +E Sbjct: 5 RTVICLLRNDLRLHDNEVFHWAQRNAEHIIPLYCFDPRHYQGTYHYNFPKTGPFRLRFLLDSVKDLRALLKKHGSTLLVRQGKPEDVVCELIKQLGSVSTVAFHEEVASEE 115
BLAST of CX671816 vs. ExPASy Swiss-Prot
Match: CRYD_RHOBA (Cryptochrome DASH OS=Rhodopirellula baltica GN=cry PE=3 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 6.176e-21 Identity = 49/107 (45.79%), Postives = 70/107 (65.42%), Query Frame = 3 Query: 438 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDE 758 ++VWFRNDLR D+E A+ V+C DPR + + GF +TGP+RA FLIE+++DLR L++ G +L+VRVG+PETVL L ++ DAV+ H E +E Sbjct: 4 ALVWFRNDLRTIDHEPFLRASTAD-RCFAVHCIDPRQFETTELGFQRTGPFRARFLIENLTDLRSRLRSLGGELIVRVGRPETVLQHLLPSLAIDAVHFHHEPRTEE 109 The following BLAST results are available for this feature:
BLAST of CX671816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671816 ID=CX671816; Name=CX671816; organism=Citrus sinensis; type=EST; length=768bpback to top |