CX671661
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671661 vs. ExPASy Swiss-Prot
Match: DCP1_ARATH (mRNA-decapping enzyme-like protein OS=Arabidopsis thaliana GN=At1g08370 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 9.064e-28 Identity = 57/67 (85.07%), Postives = 63/67 (94.03%), Query Frame = 3 Query: 378 QKNTQPRFQFVVMNRRNTDNLVENPLGDFEFEVQVPYLLYRNASQEVNGIWFYNARECEEVANLFSR 578 +++TQPRFQF+VMNRRNTDNLVEN LGDFE+EVQ PYLLYRNASQEVNGIWFYN RECEEVA LF+R Sbjct: 66 KRSTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQGPYLLYRNASQEVNGIWFYNKRECEEVATLFNR 132 HSP 2 Score: 122.479 bits (306), Expect = 3.463e-27 Identity = 60/76 (78.95%), Postives = 67/76 (88.16%), Query Frame = 1 Query: 184 MSQNGKLMANLDQQSTKLLNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSHKDVEGSLFVVKRTHSLDFSLL 411 MSQNGK++ NLDQ ST+LLNLTVLQRIDP+IEEILITAAHVTFYEFNI+LSQWS KDVEGSLFVVKR+ F + Sbjct: 1 MSQNGKIIPNLDQNSTRLLNLTVLQRIDPYIEEILITAAHVTFYEFNIELSQWSRKDVEGSLFVVKRSTQPRFQFI 76
BLAST of CX671661 vs. ExPASy Swiss-Prot
Match: DCP1B_HUMAN (mRNA-decapping enzyme 1B OS=Homo sapiens GN=DCP1B PE=1 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 2.025e-17 Identity = 26/63 (41.27%), Postives = 40/63 (63.49%), Query Frame = 3 Query: 381 KNTQPRFQFVVMNRRNTDNLVENPLGDFEFEVQVPYLLYRNASQEVNGIWFYNARECEEVANL 569 ++ P+ F +MNR + +N E D +F++Q P+LLYRNA + GIWFY+ EC+ +A L Sbjct: 64 RSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEECQRIAEL 126 HSP 2 Score: 46.595 bits (109), Expect = 2.025e-17 Identity = 22/52 (42.31%), Postives = 31/52 (59.62%), Query Frame = 1 Query: 238 LNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSHKDVEGSLFVVKRTHS 393 ++L LQR DP+I I+ A+ V Y F ++W DVEG+LFV R+ S Sbjct: 16 ISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLFVYTRSAS 67
BLAST of CX671661 vs. ExPASy Swiss-Prot
Match: DCP1B_PONAB (mRNA-decapping enzyme 1B OS=Pongo abelii GN=DCP1B PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 2.025e-17 Identity = 26/63 (41.27%), Postives = 40/63 (63.49%), Query Frame = 3 Query: 381 KNTQPRFQFVVMNRRNTDNLVENPLGDFEFEVQVPYLLYRNASQEVNGIWFYNARECEEVANL 569 ++ P+ F +MNR + +N E D +F++Q P+LLYRNA + GIWFY+ EC+ +A L Sbjct: 64 RSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEECQRIAEL 126 HSP 2 Score: 46.595 bits (109), Expect = 2.025e-17 Identity = 22/52 (42.31%), Postives = 31/52 (59.62%), Query Frame = 1 Query: 238 LNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSHKDVEGSLFVVKRTHS 393 ++L LQR DP+I I+ A+ V Y F ++W DVEG+LFV R+ S Sbjct: 16 ISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLFVYTRSAS 67
BLAST of CX671661 vs. ExPASy Swiss-Prot
Match: DCP1B_BOVIN (mRNA-decapping enzyme 1B OS=Bos taurus GN=DCP1B PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 1.653e-16 Identity = 26/63 (41.27%), Postives = 39/63 (61.90%), Query Frame = 3 Query: 381 KNTQPRFQFVVMNRRNTDNLVENPLGDFEFEVQVPYLLYRNASQEVNGIWFYNARECEEVANL 569 ++ P+ F +MNR + +N E D +F +Q P+LLYRNA + GIWFY+ EC+ +A L Sbjct: 62 RSASPKHGFTIMNRLSMENRTEPITKDLDFLLQDPFLLYRNARLSIYGIWFYDKEECQRIAEL 124 HSP 2 Score: 45.4394 bits (106), Expect = 1.653e-16 Identity = 21/52 (40.38%), Postives = 31/52 (59.62%), Query Frame = 1 Query: 238 LNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSHKDVEGSLFVVKRTHS 393 ++L L+R DP+I I+ A+ V Y F ++W DVEG+LFV R+ S Sbjct: 14 ISLAALRRHDPYISRIVDVASQVALYTFGHRANEWEKTDVEGTLFVYSRSAS 65
BLAST of CX671661 vs. ExPASy Swiss-Prot
Match: DCP1A_MOUSE (mRNA-decapping enzyme 1A OS=Mus musculus GN=Dcp1a PE=1 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.034e-15 Identity = 27/66 (40.91%), Postives = 40/66 (60.61%), Query Frame = 3 Query: 378 QKNTQPRFQFVVMNRRNTDNLVENPLGDFEFEVQVPYLLYRNASQEVNGIWFYNARECEEVANLFS 575 +++ P F ++NR N NLVE D EF++ P+LLYRNAS + IWFY+ +C +A L + Sbjct: 78 RRSASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAKLMA 143 HSP 2 Score: 41.5874 bits (96), Expect = 1.034e-15 Identity = 21/65 (32.31%), Postives = 36/65 (55.38%), Query Frame = 1 Query: 199 KLMANLDQQSTKLLNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSHKDVEGSLFVVKRTHS 393 +L++ +Q+ ++L L++ DP+I I V Y F +QW D+EG+LFV +R+ S Sbjct: 22 ELLSRAEQE----MSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRSAS 82
BLAST of CX671661 vs. ExPASy Swiss-Prot
Match: DCP1A_HUMAN (mRNA-decapping enzyme 1A OS=Homo sapiens GN=DCP1A PE=1 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.345e-15 Identity = 27/66 (40.91%), Postives = 40/66 (60.61%), Query Frame = 3 Query: 378 QKNTQPRFQFVVMNRRNTDNLVENPLGDFEFEVQVPYLLYRNASQEVNGIWFYNARECEEVANLFS 575 +++ P F ++NR N NLVE D EF++ P+LLYRNAS + IWFY+ +C +A L + Sbjct: 58 RRSASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAKLMA 123 HSP 2 Score: 41.2022 bits (95), Expect = 1.345e-15 Identity = 19/52 (36.54%), Postives = 29/52 (55.77%), Query Frame = 1 Query: 238 LNLTVLQRIDPFIEEILITAAHVTFYEFNIDLSQWSHKDVEGSLFVVKRTHS 393 ++L L++ DP+I I V Y F +QW D+EG+LFV +R+ S Sbjct: 11 MSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRSAS 62 The following BLAST results are available for this feature:
BLAST of CX671661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671661 ID=CX671661; Name=CX671661; organism=Citrus sinensis; type=EST; length=925bpback to top |