CX671659
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: RUB1_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Brassica napus PE=2 SV=2) HSP 1 Score: 333.569 bits (854), Expect = 8.198e-91 Identity = 181/227 (79.74%), Postives = 191/227 (84.14%), Query Frame = -2 Query: 136 QLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIXXXXXXXXXXXXXXPQGLMV 816 QLG ARKVTI KDSTT+IADAASKDE+QARI+QLKKEL+ETDSVYDSEKLAERIAKL+GGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGA LVHLS +PAIK+KLEDADERLGADIVQKALVAPA+LIA NA SEW GYNAMTD YEN+L+AGVIDPAKVTRCALQNAASVAGMVLTTQAI PQGLMV Sbjct: 320 QLGIARKVTISKDSTTLIADAASKDELQARISQLKKELSETDSVYDSEKLAERIAKLAGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATLVHLSTVIPAIKEKLEDADERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIMFSEWEIGYNAMTDTYENLLEAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVDKPKPKAPTAAPPQGLMV 546
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: RUBA_PEA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 332.413 bits (851), Expect = 1.826e-90 Identity = 178/227 (78.41%), Postives = 192/227 (84.58%), Query Frame = -2 Query: 136 QLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIXXXXXXXXXXXXXXPQGLMV 816 QLG ARKVTI KDSTTIIADAASKDE+Q+R+AQLKKEL+ETDS+YDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG ALVHLS +VPAIK+KLEDADERLGADIVQKALVAPA+LIA NA K+ EW GYNAMTD YEN++++GVIDPAKVTRCALQNAASVAGMVLTTQAI PQGL + Sbjct: 361 QLGLARKVTISKDSTTIIADAASKDELQSRVAQLKKELSETDSIYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSGYVPAIKEKLEDADERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIKNGEWEVGYNAMTDTYENLVESGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAAVAAAPQGLTI 587
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: RUBA_ARATH (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Arabidopsis thaliana GN=At2g28000 PE=1 SV=2) HSP 1 Score: 326.635 bits (836), Expect = 1.002e-88 Identity = 177/227 (77.97%), Postives = 188/227 (82.82%), Query Frame = -2 Query: 136 QLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIXXXXXXXXXXXXXXPQGLMV 816 QLG ARKVTI KDSTT+IADAASKDE+QARIAQLKKEL ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLS +PAIK+ EDADERLGADIVQKAL++PA+LIA NA S+W GYNAMTD YEN+ +AGVIDPAKVTRCALQNAASVAGMVLTTQAI P+GLMV Sbjct: 360 QLGIARKVTISKDSTTLIADAASKDELQARIAQLKKELFETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTVIPAIKETFEDADERLGADIVQKALLSPAALIAQNAGVEGEVVVEKIMFSDWENGYNAMTDTYENLFEAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVDKPKPKAPAAAAPEGLMV 586
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: RUBA_WHEAT (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 1.447e-87 Identity = 167/207 (80.68%), Postives = 186/207 (89.86%), Query Frame = -2 Query: 196 QLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 816 QLGTARK+TI + +TT+IADAASKDEIQAR+AQLKKEL+ETDS+YDSEKLAERIAKLSGGVAVIKVGA TETELEDR+LRIEDAKNATFAAIEEGIVPGGGAA VHLS +VPAIK+ +ED DERLGADI+QKAL APASLIA+NA K+SEW GYNAMTDKYEN++++GVIDPAKVTRCALQNAASV+GMVLTTQAI Sbjct: 316 QLGTARKITIHQTTTTLIADAASKDEIQARVAQLKKELSETDSIYDSEKLAERIAKLSGGVAVIKVGATTETELEDRQLRIEDAKNATFAAIEEGIVPGGGAAYVHLSTYVPAIKETIEDHDERLGADIIQKALQAPASLIANNAGVEGEVVIEKIKESEWEMGYNAMTDKYENLIESGVIDPAKVTRCALQNAASVSGMVLTTQAI 522
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: RUB2_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 1.956e-84 Identity = 175/227 (77.09%), Postives = 183/227 (80.62%), Query Frame = -2 Query: 136 QLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIXXXXXXXXXXXXXXPQGLMV 816 QLG ARKVTI KDSTT+IADAASK E+QARI+QLKKE ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGA LVHLS +PAIK+ EDAD RLGADIVQKALVA SLIA NA SEW GYNAMTD YEN+L+AGVIDPAKVTRCALQNAASVAGMVLTTQAI P+GLMV Sbjct: 358 QLGIARKVTISKDSTTLIADAASKAELQARISQLKKESFETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATLVHLSTVIPAIKETFEDADVRLGADIVQKALVA-QSLIAQNAGIEGEVVVEKIMFSEWELGYNAMTDTYENLLEAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVDKPKPKAPAAAAPEGLMV 583
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: RUBA_RICCO (RuBisCO large subunit-binding protein subunit alpha (Fragment) OS=Ricinus communis PE=2 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 5.889e-81 Identity = 161/193 (83.42%), Postives = 170/193 (88.08%), Query Frame = -2 Query: 238 QLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQN 816 QLG ARKVTI KDSTT+IADAASKDE+QARIAQLK+ELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLS VPAI + +DADERLGADI+QKALVAPASLIA NA K EW GYNAMTDKYEN+++AGVIDPAKVTRCALQN Sbjct: 303 QLGIARKVTITKDSTTLIADAASKDELQARIAQLKRELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTVVPAINGEDKDADERLGADILQKALVAPASLIAQNAGIEGEVVVEKVKAREWEIGYNAMTDKYENLVEAGVIDPAKVTRCALQN 495
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: RUBA_CHLRE (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 6.306e-75 Identity = 148/207 (71.50%), Postives = 169/207 (81.64%), Query Frame = -2 Query: 196 QLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 816 QLG ARKVT+ ++TT+IADAASKDEI+ RIAQLKKELAETDSVYD+EKL+ERIAKLSGGVAVIKVGAATE ELEDRKLRIEDAKNATFAA+EEGIVPGGGAAL+HLS+ VPA K+ L DA+E+LGADIV K+L AP LIA NA + GYNAM DK EN+L AGVIDPAKVTR L N+ S+AG++LTTQA+ Sbjct: 349 QLGVARKVTVANNTTTLIADAASKDEIEMRIAQLKKELAETDSVYDTEKLSERIAKLSGGVAVIKVGAATEAELEDRKLRIEDAKNATFAAVEEGIVPGGGAALLHLSELVPAFKETLTDAEEKLGADIVMKSLRAPCRLIADNAGVEGEVIVQRLLGKPFEVGYNAMIDKVENLLDAGVIDPAKVTRNGLLNSVSIAGIMLTTQAV 555
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH602_ANAVT (60 kDa chaperonin 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL2 PE=3 SV=2) HSP 1 Score: 244.202 bits (622), Expect = 6.541e-64 Identity = 130/206 (63.11%), Postives = 162/206 (78.64%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LGTA+K+TI KD+TTI+A +K EIQ RIAQ++++L ETDS YDSEKL ERIAKL+GG+AVIKVGAATETEL+DRKLRIEDA NAT AA+ EGIVPGGG L++L+ V IK K D +E++GADIV++AL AP IA NA KDS++ TGYNA T ++E+++ AG+IDPAKV R ALQNAAS+AG+VLTT+AI Sbjct: 315 LGTAQKITIEKDNTTIVAGNTTKPEIQKRIAQIRRQLEETDSEYDSEKLQERIAKLAGGIAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGKTLIYLASKVDEIK-KNFDEEEKIGADIVKRALEAPLRQIADNAGVEGSVIVSRVKDSDFNTGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAI 519
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH602_ANASP (60 kDa chaperonin 2 OS=Anabaena sp. (strain PCC 7120) GN=groL2 PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 3.246e-63 Identity = 129/206 (62.62%), Postives = 161/206 (78.16%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LGTA+K+TI KD+TTI+A +K EIQ RIAQ++++L ETDS YDSEKL ERIAKL+GG+AVIKVGAATETEL+DRKLRIEDA NAT AA+ EGIVPGGG L++L+ V IK K D +E++GADIV++AL AP IA NA KDS++ GYNA T ++E+++ AG+IDPAKV R ALQNAAS+AG+VLTT+AI Sbjct: 315 LGTAQKITIEKDNTTIVAGNTTKPEIQKRIAQIRRQLEETDSEYDSEKLQERIAKLAGGIAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGKTLIYLASKVDEIK-KNFDEEEKIGADIVKRALEAPLRQIADNAGAEGSVIVSRVKDSDFNIGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAI 519
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH601_ACAM1 (60 kDa chaperonin 1 OS=Acaryochloris marina (strain MBIC 11017) GN=groL1 PE=3 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 4.240e-63 Identity = 125/206 (60.68%), Postives = 162/206 (78.64%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LGTARKVTI KD+TTI+++AA+ ++ R+ QL+++L ETDS YD EKL ERIAKL+GGVAVIKVGAATETEL+DRKLRIEDA NAT AA+ EGIVPGGG L+HL+ + ++K +L+D +E++GAD+V AL AP + IA NA +D++++ GYNAMTD YE+M+ AGV+DPAKV R LQNA S+AGMVLTT+A+ Sbjct: 315 LGTARKVTISKDNTTIVSEAANAGDVGKRVEQLRRQLDETDSEYDKEKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGTTLIHLTKTIESVKAQLKD-EEKVGADLVGIALEAPLTQIADNAGKEGAVVVEKVRDADFSYGYNAMTDTYEDMIAAGVVDPAKVVRSGLQNAGSIAGMVLTTEAL 519 The following BLAST results are available for this feature:
BLAST of CX671659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671659 ID=CX671659; Name=CX671659; organism=Citrus sinensis; type=EST; length=817bpback to top |