CX671638
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671638 vs. ExPASy Swiss-Prot
Match: TAF13_PONAB (Transcription initiation factor TFIID subunit 13 OS=Pongo abelii GN=TAF13 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.845e-22 Identity = 52/94 (55.32%), Postives = 73/94 (77.66%), Query Frame = 2 Query: 422 KRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKGGKLSVEDFLYLIRKDLPKLNRCTELLSMQEELKQARKAFE 703 KRKR +F K+L+ MMYGFGDD NP E+V ++ED+V+E++T++ HKA IG + G++ VED ++LIRKD K R +LL+M EELK+ARKAF+ Sbjct: 27 KRKR-LFSKELRCMMYGFGDDQNPYTESVDILEDLVIEFITEMTHKAMSIG-RQGRVQVEDIVFLIRKDPRKFARVKDLLTMNEELKRARKAFD 118
BLAST of CX671638 vs. ExPASy Swiss-Prot
Match: TAF13_MOUSE (Transcription initiation factor TFIID subunit 13 OS=Mus musculus GN=Taf13 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.845e-22 Identity = 52/94 (55.32%), Postives = 73/94 (77.66%), Query Frame = 2 Query: 422 KRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKGGKLSVEDFLYLIRKDLPKLNRCTELLSMQEELKQARKAFE 703 KRKR +F K+L+ MMYGFGDD NP E+V ++ED+V+E++T++ HKA IG + G++ VED ++LIRKD K R +LL+M EELK+ARKAF+ Sbjct: 27 KRKR-LFSKELRCMMYGFGDDQNPYTESVDILEDLVIEFITEMTHKAMSIG-RQGRVQVEDIVFLIRKDPRKFARVKDLLTMNEELKRARKAFD 118
BLAST of CX671638 vs. ExPASy Swiss-Prot
Match: TAF13_HUMAN (Transcription initiation factor TFIID subunit 13 OS=Homo sapiens GN=TAF13 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.845e-22 Identity = 52/94 (55.32%), Postives = 73/94 (77.66%), Query Frame = 2 Query: 422 KRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKGGKLSVEDFLYLIRKDLPKLNRCTELLSMQEELKQARKAFE 703 KRKR +F K+L+ MMYGFGDD NP E+V ++ED+V+E++T++ HKA IG + G++ VED ++LIRKD K R +LL+M EELK+ARKAF+ Sbjct: 27 KRKR-LFSKELRCMMYGFGDDQNPYTESVDILEDLVIEFITEMTHKAMSIG-RQGRVQVEDIVFLIRKDPRKFARVKDLLTMNEELKRARKAFD 118
BLAST of CX671638 vs. ExPASy Swiss-Prot
Match: TAF13_BOVIN (Transcription initiation factor TFIID subunit 13 OS=Bos taurus GN=TAF13 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.845e-22 Identity = 52/94 (55.32%), Postives = 73/94 (77.66%), Query Frame = 2 Query: 422 KRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKGGKLSVEDFLYLIRKDLPKLNRCTELLSMQEELKQARKAFE 703 KRKR +F K+L+ MMYGFGDD NP E+V ++ED+V+E++T++ HKA IG + G++ VED ++LIRKD K R +LL+M EELK+ARKAF+ Sbjct: 27 KRKR-LFSKELRCMMYGFGDDQNPYTESVDILEDLVIEFITEMTHKAMSIG-RQGRVQVEDIVFLIRKDPRKFARVKDLLTMNEELKRARKAFD 118
BLAST of CX671638 vs. ExPASy Swiss-Prot
Match: TAF13_DICDI (Transcription initiation factor TFIID subunit 13 OS=Dictyostelium discoideum GN=taf13 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.933e-20 Identity = 48/96 (50.00%), Postives = 68/96 (70.83%), Query Frame = 2 Query: 416 SFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKGGKLSVEDFLYLIRKDLPKLNRCTELLSMQEELKQARKAFE 703 S KRKR +F K+L+HMMYGFGD PL E++ L+E++V E++ ++ KA + +K GK ED ++L+RKD K R ELL M EELK+A+KAF+ Sbjct: 2 STKRKR-MFSKELKHMMYGFGDVREPLHESIDLLEELVFEFIQEMTLKAAQVSNKRGKFQTEDLVFLVRKDPKKYYRVIELLRMNEELKKAKKAFD 96
BLAST of CX671638 vs. ExPASy Swiss-Prot
Match: TAF13_SCHPO (Transcription initiation factor TFIID subunit 13 OS=Schizosaccharomyces pombe GN=taf13 PE=2 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14 Identity = 35/93 (37.63%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 425 RKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKGGKLSVEDFLYLIRKDLPKLNRCTELLSMQEELKQARKAFE 703 R++ +F KDL+ +MY FGDD NP P+++ ++E+IVV+Y+ ++ +A I K+ V+DF + +R D KL R ELL +Q+ + R + Sbjct: 13 RRQHLFTKDLKSLMYAFGDDVNPAPDSINVLEEIVVDYINEMCLEAARIAGNRNKVKVDDFKFALRDDPKKLGRVEELLVLQKMIADTRNVMK 105
BLAST of CX671638 vs. ExPASy Swiss-Prot
Match: TAF13_YEAST (Transcription initiation factor TFIID subunit 13 OS=Saccharomyces cerevisiae GN=TAF13 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 35/96 (36.46%), Postives = 58/96 (60.42%), Query Frame = 2 Query: 425 RKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLA----HKAQDIGSKGGKLSVEDFLYLIRKDLPKLNRCTELLSMQEELKQARKAF 700 +K +F KD+ ++Y +GD P PL TV ++++V Y+ D+ H AQ+ S+ KL +EDF + +RKD KL R EL++ + + +A+K F Sbjct: 6 KKTNLFNKDVSSLLYAYGDVPQPLQATVQCLDELVSGYLVDVCTNAFHTAQN--SQRNKLRLEDFKFALRKDPIKLGRAEELIATNKLITEAKKQF 99 The following BLAST results are available for this feature:
BLAST of CX671638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671638 ID=CX671638; Name=CX671638; organism=Citrus sinensis; type=EST; length=708bpback to top |