CX671590
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671590 vs. ExPASy Swiss-Prot
Match: LE14B_PRUAR (LEC14B homolog OS=Prunus armeniaca PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 7.127e-54 Identity = 93/130 (71.54%), Postives = 106/130 (81.54%), Query Frame = -1 Query: 268 KMSSNTTDNSRLRDYDWDYRWMEYPSSARRLKHPHDQSSATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWEIPGIGEAP 657 KMSS + RLRD+DWDYRWMEYP+ A+ LKHP+DQS ATY+GH VLRTLIRCY SP YST QKYIYTGSSD+ VYIYDLV+GAQVA+L+ H PVRDC WHP+YPML+SSSWD I RWE PG + P Sbjct: 332 KMSSRAMYSPRLRDHDWDYRWMEYPAHAKTLKHPNDQSLATYRGHGVLRTLIRCYLSPAYSTGQKYIYTGSSDHCVYIYDLVTGAQVARLNHHEGPVRDCSWHPLYPMLVSSSWDGTIARWEFPGDDQVP 461
BLAST of CX671590 vs. ExPASy Swiss-Prot
Match: LE14B_LITER (LEC14B protein OS=Lithospermum erythrorhizon PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 4.474e-48 Identity = 89/131 (67.94%), Postives = 101/131 (77.10%), Query Frame = -1 Query: 265 KMSSNTTDNSRLRDYDWDYRWMEYPSSARRLKHPHDQSSATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWEIPGIGEAPL 657 KMSSN + R+ +WDYRWMEYP AR LKHP D S ATYKGHSVL TLIRCYFSP+YST QKYIYTGS D +VYIYDLV+G QV+ L +H A VRDC WHP YPML+SSS+D IV+WE G EAP+ Sbjct: 334 KMSSNAGGTIQSRNSEWDYRWMEYPQEARDLKHPSDLSGATYKGHSVLCTLIRCYFSPDYSTGQKYIYTGSHDANVYIYDLVTGDQVSTLQYHKATVRDCSWHPNYPMLVSSSFDGEIVKWEYRGNDEAPV 464
BLAST of CX671590 vs. ExPASy Swiss-Prot
Match: DCA11_BOVIN (DDB1- and CUL4-associated factor 11 OS=Bos taurus GN=DCAF11 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.015e-28 Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = -1 Query: 292 DWDYRWMEYPSSA-RRLKHPHDQSSATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 612 +WDYRW + P A R+LK P D S TY+GH VL TLIRC FSP +ST Q++IY+G S V +YDL+SG V KL H A VRD WHP ++SSSWD N+ W+ Sbjct: 404 NWDYRWQQVPKKAWRKLKLPGDSSLMTYRGHGVLHTLIRCRFSPTHSTGQQFIYSGCSTGKVVVYDLLSGHVVKKLTTHKACVRDVSWHPFEEKIVSSSWDGNLRLWQ 511
BLAST of CX671590 vs. ExPASy Swiss-Prot
Match: DCA11_PONAB (DDB1- and CUL4-associated factor 11 OS=Pongo abelii GN=DCAF11 PE=2 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 8.773e-28 Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = -1 Query: 292 DWDYRWMEYPSSA-RRLKHPHDQSSATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 612 +WDYRW + P A R+LK P D S TY+GH VL TLIRC FSP +ST Q++IY+G S V +YDL+SG V KL H A VRD WHP ++SSSWD N+ W+ Sbjct: 404 NWDYRWQQVPKKAWRKLKLPGDSSLMTYRGHGVLHTLIRCRFSPIHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGNLRLWQ 511
BLAST of CX671590 vs. ExPASy Swiss-Prot
Match: DCA11_HUMAN (DDB1- and CUL4-associated factor 11 OS=Homo sapiens GN=DCAF11 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.773e-28 Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = -1 Query: 292 DWDYRWMEYPSSA-RRLKHPHDQSSATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 612 +WDYRW + P A R+LK P D S TY+GH VL TLIRC FSP +ST Q++IY+G S V +YDL+SG V KL H A VRD WHP ++SSSWD N+ W+ Sbjct: 404 NWDYRWQQVPKKAWRKLKLPGDSSLMTYRGHGVLHTLIRCRFSPIHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGNLRLWQ 511
BLAST of CX671590 vs. ExPASy Swiss-Prot
Match: DCA11_MOUSE (DDB1- and CUL4-associated factor 11 OS=Mus musculus GN=Dcaf11 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.954e-27 Identity = 57/108 (52.78%), Postives = 72/108 (66.67%), Query Frame = -1 Query: 292 DWDYRWMEYPSSA-RRLKHPHDQSSATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 612 +WDYRW + P A ++LK P D S TY+GH VL TLIRC FSP +ST Q++IY+G S V +YDL+SG V KL H A VRD WHP ++SSSWD N+ W+ Sbjct: 404 NWDYRWQQVPKIAWKKLKLPGDSSLMTYRGHGVLHTLIRCRFSPAHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGNLRLWQ 511
BLAST of CX671590 vs. ExPASy Swiss-Prot
Match: DCA11_RAT (DDB1- and CUL4-associated factor 11 OS=Rattus norvegicus GN=Dcaf11 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.354e-27 Identity = 56/108 (51.85%), Postives = 72/108 (66.67%), Query Frame = -1 Query: 292 DWDYRWMEYPSSA-RRLKHPHDQSSATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 612 +WDYRW + P A ++LK P D S TY+GH VL TLIRC FSP +ST Q++IY+G S V +YDL+SG V KL H A VRD WHP ++SSSWD ++ W+ Sbjct: 404 NWDYRWQQVPKKAWKKLKLPGDSSLMTYRGHGVLHTLIRCRFSPAHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGSLRLWQ 511
BLAST of CX671590 vs. ExPASy Swiss-Prot
Match: DCA11_CAEEL (DDB1- and CUL4-associated factor 11 homolog OS=Caenorhabditis elegans GN=wdr-23 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.699e-19 Identity = 51/122 (41.80%), Postives = 67/122 (54.92%), Query Frame = -1 Query: 295 MSSNTTDNSRLRDYDWDYRWMEYPSSARRLKHP--HDQSSATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRW 654 MS + ++ WDYRW P L P D S T +GHSVL TL+R FSPE ST ++YIYTG + V +YD++SG +L H A VR+C WHP ++SS+WD W Sbjct: 394 MSGVEATRACVQSQHWDYRWQPAPPG---LCQPVAGDTSVMTLRGHSVLHTLVRANFSPE-STGRRYIYTGCARGEVVVYDIMSGTVSRRLKGHTAVVRECDWHPTENEIVSSAWDGVTTVW 511
BLAST of CX671590 vs. ExPASy Swiss-Prot
Match: DCA11_CAEBR (DDB1- and CUL4-associated factor 11 homolog OS=Caenorhabditis briggsae GN=wdr-23 PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.404e-17 Identity = 46/107 (42.99%), Postives = 62/107 (57.94%), Query Frame = -1 Query: 295 WDYRWMEYPSSARRLKHP--HDQSSATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRW 609 WDYRW P L P D S T +GHSVL TL+R FSPE +T +++IYTG + + +YD+V+G +L H A VR+C WHP ++S+SWD W Sbjct: 388 WDYRWQPAPPG---LCQPVQGDTSVMTLRGHSVLHTLVRAKFSPE-NTGRRFIYTGCARGEIVVYDIVTGTVSRRLKGHQAVVRECDWHPQENEIVSTSWDGVTTVW 490 The following BLAST results are available for this feature:
BLAST of CX671590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671590 ID=CX671590; Name=CX671590; organism=Citrus sinensis; type=EST; length=657bpback to top |