CX671262
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671262 vs. ExPASy Swiss-Prot
Match: HS235_ARATH (23.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.130e-41 Identity = 105/214 (49.07%), Postives = 132/214 (61.68%), Query Frame = -2 Query: 149 ASSLALKRLVSFNLI--PRAXRCTVAPSATSASRFFNTNAVRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTRSLSQVLNFMDQMTESPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXESV--RRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP*VKEEERADVFQVKVD 766 +S+LAL+RL+S + + PRA R V P A S SR FNTNA R Y TRSLSQ+LNFMDQ++E P S TRG G+RRGW+ KE DDAL+L IDMPGL +EDV+++LEQNTLVIR S RR+TSRI+LPEK+Y+TD+IKAEMKNGVLKV +P +KE+ER ++ + VD Sbjct: 4 SSALALRRLLSSSTVAVPRALRA-VRPVAAS-SRLFNTNAARNYEDGVDRNHHSNRHVSRHGGDFFSHILDPFTP-----TRSLSQMLNFMDQVSEIPLVSATRGMGASGVRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDGRRFTSRIELPEKVYKTDEIKAEMKNGVLKVVIPKIKEDERNNIRHINVD 210
BLAST of CX671262 vs. ExPASy Swiss-Prot
Match: HS22M_PEA (Heat shock 22 kDa protein, mitochondrial OS=Pisum sativum GN=HSP22 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.633e-41 Identity = 106/209 (50.72%), Postives = 129/209 (61.72%), Query Frame = -2 Query: 149 MASSLALKRLVSFNLIPRAXRCTVAPSATSASRFFNTNAVRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTRSLSQVLNFMDQMTESPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXE--SVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP*VKEEERADVFQVKVD 769 MASSLALKR +S L+ + + P A+SASR FNTNA+RQY P RSLSQVLN +D +T++P S RRGWDA+ET+DAL L +DMPGLGKEDV++S+EQNTL I+ + S RR++SRIDLPEKLY+ D IKAEMKNGVLKVTVP +KEEER +V VKVD Sbjct: 1 MASSLALKRFLSSGLLSSSF---LRPVASSASRSFNTNAMRQYDQHSDDRNVDVYRHSFPRTRRDDLLLSDVFDPFSPP-RSLSQVLNMVDLLTDNPVLSAAS---RRGWDARETEDALFLRLDMPGLGKEDVKISVEQNTLTIKGEEGAKESEEKEKSGRRFSSRIDLPEKLYKIDVIKAEMKNGVLKVTVPKMKEEERNNVINVKVD 202
BLAST of CX671262 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.803e-40 Identity = 103/215 (47.91%), Postives = 130/215 (60.47%), Query Frame = -2 Query: 149 MASSLALKRLVSFNLIPRAXRCTVAPSATSASRFFNTNAVRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTRSLSQVLNFMDQMTESPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXESV----RRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP*VKEEERADVFQVKVD 769 MAS+LALKRL+S ++ PR+ R + P+ +S R FNTNAVR Y TRS+SQVLN MDQ E+P S TRG G RRGWD KE DDAL L IDMPGL +EDV+++LEQ+TLVIR E RR+TSRI LP+K+Y+ D+IKAEMKNGVLKV +P +KE+ER DV Q++++ Sbjct: 1 MASALALKRLLSSSIAPRS-RSVLRPAVSS--RLFNTNAVRSYDDDGENGDGVDLYRRSVPRRRGDFFSDVFDPFSP--TRSVSQVLNLMDQFMENPLLSATRGMGASGARRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPKMKEQERNDVRQIEIN 210
BLAST of CX671262 vs. ExPASy Swiss-Prot
Match: HS22M_SOYBN (Heat shock 22 kDa protein, mitochondrial OS=Glycine max GN=HSP23.9 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.036e-39 Identity = 67/100 (67.00%), Postives = 81/100 (81.00%), Query Frame = -2 Query: 149 RGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP*VKEEERADVFQVKVD 448 RGWDA+ET+DAL+L +DMPGL KEDV++S+EQNTL+I+ ES RRYTSRIDLP+KLY+ DQI+AEMKNGVLKV VP +KEEER DV VKV+ Sbjct: 112 RGWDARETEDALHLRVDMPGLAKEDVKISVEQNTLIIKGEGAKEGDEEESARRYTSRIDLPDKLYKIDQIRAEMKNGVLKVVVPKMKEEERKDVISVKVE 211 HSP 2 Score: 37.7354 bits (86), Expect = 7.036e-39 Identity = 20/43 (46.51%), Postives = 31/43 (72.09%), Query Frame = -2 Query: 641 MASSLALKRLVSFNLIPRAXRCTVAPSATSASRFFNTNAVRQY 769 MASSL KR +S +L+ R+ + P+A+++ R F+TNA+RQY Sbjct: 1 MASSLIAKRFLSSSLLSRSL---LRPAASASHRSFDTNAMRQY 40 HSP 3 Score: 25.7942 bits (55), Expect = 7.036e-39 Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = -1 Query: 483 CV*SIFTNKEPEPGPELHGSDDGE 554 CV SIF++ E EPG E G G+ Sbjct: 72 CVGSIFSDSEFEPGSEHDGPGHGQ 95
BLAST of CX671262 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.063e-36 Identity = 91/208 (43.75%), Postives = 117/208 (56.25%), Query Frame = -2 Query: 149 SSLALKRLVSFNLIPRAXRCTVAPSATSASRFFNTNAVRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTRSLSQVLNFMDQMTESPFFSGTRGG---LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP*VKEEERADVFQVKVD 763 +S+AL+RL S NL+ + S SR FNTNA TRS+ Q++N MDQ+ E+PF + +RG +RRGWD +E ++AL L +DMPGL KEDV+VS+E NTL+I+ E RRY+SRI+L LY+ D IKAEMKNGVLKVTVP +KEEE+ DVFQV VD Sbjct: 2 ASMALRRLASRNLVSGGIFRPL-----SVSRSFNTNAQMGRVDHDHELDDRSNRAPISRRGDFPASFFSDVFDPFRATRSVGQLMNLMDQLMENPFMAASRGSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETEEEEQRRRYSSRIELTPNLYKIDGIKAEMKNGVLKVTVPKIKEEEKKDVFQVMVD 204
BLAST of CX671262 vs. ExPASy Swiss-Prot
Match: HS24M_ORYSJ (24.1 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP24.1 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.899e-27 Identity = 68/129 (52.71%), Postives = 89/129 (68.99%), Query Frame = -2 Query: 149 RSLSQVLNFMDQMTESPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXESVR--RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP*VKEEERADVFQVKVD 529 +SL ++L+ MD + +P LRRGW+AKE+++AL+L +DMPGLGKE V+V EQN+LVI+ E RY+ RI+L ++YR DQIKAEMKNGVLKV VP VKEE+R DVFQV V+ Sbjct: 93 QSLGRLLSLMDDLA-TPAGRAGAATLRRGWNAKESEEALHLRVDMPGLGKEHVKVWAEQNSLVIKGEGEKEAGEDEGAAPARYSGRIELAPEVYRMDQIKAEMKNGVLKVVVPKVKEEQRRDVFQVNVE 220
BLAST of CX671262 vs. ExPASy Swiss-Prot
Match: HS26M_ORYSJ (26.2 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP26.2 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.695e-22 Identity = 66/135 (48.89%), Postives = 82/135 (60.74%), Query Frame = -2 Query: 149 SLSQVLNFM-DQMTESPFFSGTRG----GLRRG--WDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXESVR--RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP*VKEEERADVFQVKVD 526 SL ++L M D + GT G RRG W AKE DDA++L + MPGLGKE V+V EQN+LVI+ RYT RI+LP ++ D+IKAEMKNGVL+V VP +KEEER DVFQV V+ Sbjct: 114 SLGRLLALMEDAAVATAAAPGTNGLATAAARRGGWWVAKEDDDAVHLKVSMPGLGKEHVKVWAEQNSLVIKGEGEKDPEDDADAAPPRYTRRIELPADAFKMDKIKAEMKNGVLRVAVPKLKEEERKDVFQVNVE 248
BLAST of CX671262 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.283e-16 Identity = 52/136 (38.24%), Postives = 76/136 (55.88%), Query Frame = -2 Query: 155 RSLSQVLNFMDQMTES--PFFSGTRGG-----LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI----RXXXXXXXXXXESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP*VKEEERADVFQVK 529 R++ Q+L+ MD+M E P RGG +R WD KE + + + DMPGL KEDV++S+E N LVI + SV Y +R+ LP+ + D+IKAE+KNGVL +T+P K E + Q++ Sbjct: 93 RTMRQMLDTMDRMFEDTMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSYGTRLQLPDNCEK-DKIKAELKNGVLFITIPKTKVERKVIDVQIQ 227
BLAST of CX671262 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.457e-14 Identity = 51/136 (37.50%), Postives = 76/136 (55.88%), Query Frame = -2 Query: 155 RSLSQVLNFMDQMTESPF-FSGTR---GGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI----RXXXXXXXXXXESVRRYTS---RIDLPEKLYRTDQIKAEMKNGVLKVTVP*VKEEERADVFQVK 529 RS+ Q+L+ MD++ E F G G +R WD K+ + + + DMPGL KEDV+VS+E + LVI + S R Y+S R+ LP+ + D++KAE+KNGVL +T+P K E + QV+ Sbjct: 47 RSMRQILDTMDRVFEDTMTFPGRNIGGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDSWSSRTYSSYDTRLKLPDNCEK-DKVKAELKNGVLYITIPKTKVERKVIDVQVQ 181
BLAST of CX671262 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.457e-14 Identity = 44/135 (32.59%), Postives = 79/135 (58.52%), Query Frame = -2 Query: 155 RSLSQVLNFMDQMTESPF-FSGTR----GGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI-----RXXXXXXXXXXESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP*VKEEERADVFQVK 529 R++ Q+++ MD++ E F G+R G +R WD K+ ++ + + DMPGL KE+V+VS+E + LVI + + Y +R+ LP+ + + D++KAE+KNGVL +++P K E++ ++K Sbjct: 108 RTMRQMMDTMDRLFEDTMTFPGSRNRGTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEESGKDDSWGRNYSSYDTRLSLPDNVDK-DKVKAELKNGVLLISIPKTKVEKKVTDVEIK 241 The following BLAST results are available for this feature:
BLAST of CX671262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671262 ID=CX671262; Name=CX671262; organism=Citrus sinensis; type=EST; length=842bpback to top |