CV712547
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_CITSI (Putative membrane protein ycf1 OS=Citrus sinensis GN=ycf1-A PE=3 SV=1) HSP 1 Score: 526.939 bits (1356), Expect = 4.763e-149 Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 2 Query: 2 SPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVL 790 SPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVL Sbjct: 1508 SPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVL 1770
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_GOSHI (Putative membrane protein ycf1 OS=Gossypium hirsutum GN=ycf1 PE=3 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 1.119e-81 Identity = 156/263 (59.32%), Postives = 194/263 (73.76%), Query Frame = 2 Query: 2 SPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVL 790 +P +K+ L N+++EE E +G SDAQKQ SVLSNQEKD EE+Y SD K R KKKQ K TE +LDFFLKRYL QLRW S ++I+N+++VYC L+RLINP+++ I+SIQRGEM+L IL+ +K L+EL K G+LII+P RLSVKNDGQF LYQ + I LVHKNK +I +RYQEK Y+DK F EFIA+HQKMT N++KNHYDL VPE IL P RRELR I FNS+++NGM +N VF NN K G+VL Sbjct: 1573 APNEKQIIGLENRNQEEKEPIGEGGLVSDAQKQGNFKSVLSNQEKDVEEDYDKSDKKKRRKKKQYKSNTEAELDFFLKRYLRFQLRWDD--SLNQRIINNIKVYCLLLRLINPNEIVISSIQRGEMNLDILMIQKDLTLRELMKKGILIIDPVRLSVKNDGQFILYQTISILLVHKNKHQINQRYQEKNYIDKNHFYEFIARHQKMTENKDKNHYDLFVPENILSPNHRRELRIRISFNSRDKNGMHRNAVFLNNVKNCGQVL 1833
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_GOSBA (Putative membrane protein ycf1 OS=Gossypium barbadense GN=ycf1 PE=3 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 1.119e-81 Identity = 156/263 (59.32%), Postives = 194/263 (73.76%), Query Frame = 2 Query: 2 SPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVL 790 +P +K+ L N+++EE E +G SDAQKQ SVLSNQEKD EE+Y SD K R KKKQ K TE +LDFFLKRYL QLRW S ++I+N+++VYC L+RLINP+++ I+SIQRGEM+L IL+ +K L+EL K G+LII+P RLSVKNDGQF LYQ + I LVHKNK +I +RYQEK Y+DK F EFIA+HQKMT N++KNHYDL VPE IL P RRELR I FNS+++NGM +N VF NN K G+VL Sbjct: 1570 APNEKQIIGLENRNQEEKEPIGEGGLVSDAQKQGNFKSVLSNQEKDVEEDYDKSDKKKRRKKKQYKSNTEAELDFFLKRYLRFQLRWDD--SLNQRIINNIKVYCLLLRLINPNEIVISSIQRGEMNLDILMIQKDLTLRELMKKGILIIDPVRLSVKNDGQFILYQTISILLVHKNKHQINQRYQEKNYIDKNHFYEFIARHQKMTENKDKNHYDLFVPENILSPNHRRELRIRISFNSRDKNGMHRNAVFLNNVKNCGQVL 1830
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_EUCGG (Putative membrane protein ycf1 OS=Eucalyptus globulus subsp. globulus GN=ycf1 PE=3 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 1.014e-74 Identity = 149/261 (57.09%), Postives = 188/261 (72.03%), Query Frame = 2 Query: 11 QKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLL-VPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVL 790 +K+ EL N+++EE E A + SDAQ Q LGS+ SNQEKD E+Y SDMK R KKK+ K TEV+L FFLKRYL +QLRW S ++++N++++YC L+RLINP ++AI+SIQRGEMSL ILIT+K L EL K G+LIIEP RLS+KNDGQ +YQ + I+L HK+K KI + Y+EK YV K + D+ IA+H KM NR KN YDLL VPE +L KRRRELR ICFNS+ +NG+ KNPVF NN K G L Sbjct: 1562 EKKSIELENRNQEEKESAIRDNLESDAQNQANLGSLFSNQEKDIGEDYASSDMKKRRKKKEYKSNTEVELYFFLKRYLRIQLRWDD--SLNQRMINNIKIYCLLLRLINPREIAISSIQRGEMSLDILITQKDLTLTELMKKGILIIEPIRLSIKNDGQLIMYQSLNISLFHKSKPKINQIYREKSYVAKINLDKSIARHPKMAENRYKNDYDLLFVPEKVLSTKRRRELRIRICFNSRKRNGIHKNPVFCNNVKNWGEFL 1820
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_BUXMI (Putative membrane protein ycf1 OS=Buxus microphylla GN=ycf1-A PE=3 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 1.619e-72 Identity = 140/255 (54.90%), Postives = 183/255 (71.76%), Query Frame = 2 Query: 8 TQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGK 772 T+K+ EL N+++EE E QG SDAQ LG VLSNQ+KD EE+Y GS++K R KKKQ TE +L+F LKRYL QLRW F ++++N+++VYC L+RLINP +++I+SIQ GEMS I+ +K + EL K G+LIIEP RLS+K DGQF +YQ + I+LVHKNK++ R +EK YVDK FDE IA+H+KM G ++NHY+LLVPE I P+RRRELR ICFNS N+N + +NPVFFN K Sbjct: 1542 TEKKSIELENRNQEEKETRGQGDLGSDAQNHGNLGYVLSNQQKDVEEDYAGSNIKKRRKKKQCTSNTEAELNFLLKRYLLFQLRWDDP--FNQRMINNIKVYCLLLRLINPKEISISSIQSGEMSPDII--QKDLTITELIKKGLLIIEPVRLSIKRDGQFIMYQTISISLVHKNKQQTNGRCREKRYVDKNYFDESIARHEKMVGTGDENHYELLVPENISSPRRRRELRIRICFNSGNKNFVDRNPVFFNENK 1792
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_VITVI (Putative membrane protein ycf1 OS=Vitis vinifera GN=ycf1 PE=3 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 2.114e-72 Identity = 143/258 (55.43%), Postives = 186/258 (72.09%), Query Frame = 2 Query: 2 SPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSD--MKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTK--GGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 763 S +K+ +L N+++EE E A Q SD Q Q L SVLSN EKD EE+Y GSD M+ R KKKQ K TE +LD FLKRYL QLRW S +K++N+++VYC L+RLINP ++ I++IQRGEMSL ++ K L EL K G+ IIEP RLSVKNDGQF +YQ +GI+LVHK+K + +RY+E+ YVD K+ D+F A+ QKM GN++KNHYDLLVPE IL P+RRR+ R LICFN +N++G+ +NPVF N Sbjct: 1568 SSNEKKLLKLENRNQEEKESAGQVDLGSDVQNQGNLESVLSNHEKDIEEDYAGSDSDMQKRTKKKQFKNHTEAELDLFLKRYLLFQLRWDD--SLNQKMINNIKVYCLLLRLINPREICISAIQRGEMSLDLIPVHKDLTLTELMKMKRGIFIIEPIRLSVKNDGQFIMYQTIGISLVHKSKYQTNQRYREERYVDNKNCDKFSARCQKMIGNKDKNHYDLLVPENILSPRRRRKFRILICFNLRNRSGVARNPVFCN 1823
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_PLAOC (Putative membrane protein ycf1 OS=Platanus occidentalis GN=ycf1 PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 9.822e-70 Identity = 139/272 (51.10%), Postives = 187/272 (68.75%), Query Frame = 2 Query: 11 QKEYFELSNQSKEENELADQGTPRSDAQKQVILG----------SVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVL 790 +K+ EL N+++EE E + QG S+AQ Q LG SVL NQ+K+ EE+Y GSD+K KKKQ K + EV+LD LK+YL QLRW G S ++ILN++++YC L+RLINP ++ I+SIQ+GEMSL I++ K+ EL K G+ IIEP RLS+K DGQF +YQ +GI+LVHK+K + +RY+EK +DK F+ FIA+H+ M GN ++NHYDLLVPE I P+RRRELR L CF+ N N + +NPVF NN K G+ L Sbjct: 1585 KKKSLELENRNQEEKESSSQGDLGSNAQNQGNLGPNAQNQGNLGSVLPNQQKNLEEDYAGSDIKKVRKKKQFKSKAEVELDLLLKKYLLFQLRWNG--SLNQRILNNIKIYCFLLRLINPKEITISSIQKGEMSLGIMLIKRDLTFTELIKRGIFIIEPVRLSIKWDGQFIMYQTIGISLVHKSKHQTNQRYREKRCIDKNHFEGFIARHENMLGNGDENHYDLLVPENISSPRRRRELRILTCFHFLNGNVLDRNPVFCNGNNVKNCGQFL 1854
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_MORIN (Putative membrane protein ycf1 OS=Morus indica GN=ycf1 PE=3 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.283e-69 Identity = 141/260 (54.23%), Postives = 181/260 (69.62%), Query Frame = 2 Query: 11 QKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVL 790 +K+Y EL Q++ E E ++D + S LSNQEKD EENY S MK KKQS+ E + DF LKRYL QLRW S +K++++++VYC L+R IN ++ IASIQRGE++L +L+ +K F L EL K G+L+IEP RLS KN+GQF +YQ +GI+LVHK+K I +RY+EKG VD K+FDEFI+KHQKMT NR+KNHYDL VPETIL P+ RRELR LICFNS+N+NG+ N F N K VL Sbjct: 1556 EKKYLELEKQNQVEKEYGI----KTDFE------STLSNQEKDIEENYAVSKMKKN--KKQSRTNMEAEFDFLLKRYLLFQLRWDD--SLNKKMIDNIKVYCSLLRPINLREITIASIQRGEINLDLLMIQKNFILTELIKKGILLIEPVRLSRKNEGQFIMYQTIGISLVHKSKHTINQRYREKGLVDTKNFDEFISKHQKMTENRDKNHYDLFVPETILSPRHRRELRILICFNSRNRNGIPSNAFFCNENKVKSPVL 1801
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_CALFG (Putative membrane protein ycf1 OS=Calycanthus floridus var. glaucus GN=ycf1 PE=3 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.419e-68 Identity = 140/265 (52.83%), Postives = 183/265 (69.06%), Query Frame = 2 Query: 2 SPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVL 790 S QK+Y EL N+++EE E QG SD Q NQ+KD E++Y SD+K R KK+QSK +L FFLKRYL QLRW ++ ++++N+++VYC L+RLINP ++AI+SIQRGEM L +++ +K L EL K G+LIIEP RLS+K DGQF +YQ +GI+LVHKNK + +RY+EK YVD+ FD IA+H KM NR +N YDLLVPE IL P+RRRELR LI FNS N+N + +N VFF NN K G+ L Sbjct: 1516 SSNQKDYLELENRNQEEKEEFGQGNLGSDTQ----------NQQKDVEKDYAKSDIKKRGKKRQSKSNKGAELQFFLKRYLLFQLRWDDPLN--QRMMNNVKVYCLLLRLINPREIAISSIQRGEMRLDVMLIQKDLTLTELIKRGILIIEPVRLSIKWDGQFIMYQTIGISLVHKNKHQTNRRYREKRYVDENYFDGSIAQHGKMLVNRAENDYDLLVPENILSPRRRRELRILISFNSGNRNVVDRNLVFFNGNNVKNFGQFL 1768
BLAST of CV712547 vs. ExPASy Swiss-Prot
Match: YCF1_NASOF (Putative membrane protein ycf1 OS=Nasturtium officinale GN=ycf1-A PE=3 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 4.126e-68 Identity = 135/252 (53.57%), Postives = 171/252 (67.86%), Query Frame = 2 Query: 11 QKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNN 766 +K+ N +KEE E A Q SD +K++ S LSN EK+ EENY S +K R KKQ K TE +LD FL RY QLRW F +KILN+++VYC LVRL NP+++AI+SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI+LVHKNK KI KRY++K Y++KK ++ I K+Q T NR KNHYD VPE IL PKRRRE R LICFN K +N +N F N Sbjct: 1486 EKKSLRFFNLNKEEKESAGQVELESDKEKKINPESALSNHEKNIEENYEESTIKKRKNKKQYKSNTEAELDLFLTRYSRFQLRWNSF--FNQKILNNVKVYCLLVRLKNPNEIAISSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPVRLSVQNDGQRIIYRTIGISLVHKNKHKINKRYKKKSYIEKKTIEKSITKYQNKTVNRKKNHYDFFVPENILSPKRRREFRILICFNLKKKNARDRNSRFNKN 1735 The following BLAST results are available for this feature:
BLAST of CV712547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712547 ID=CV712547; Name=CV712547; organism=Citrus sinensis; type=EST; length=791bpback to top |