CV712546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_CITSI (Putative membrane protein ycf1 OS=Citrus sinensis GN=ycf1-A PE=3 SV=1) HSP 1 Score: 525.013 bits (1351), Expect = 1.920e-148 Identity = 264/271 (97.42%), Postives = 265/271 (97.79%), Query Frame = -2 Query: 1 SPTQKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVWIKTKICSR 813 SPTQKEY ELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRV K K +R Sbjct: 1508 SPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNLAR 1778
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_GOSHI (Putative membrane protein ycf1 OS=Gossypium hirsutum GN=ycf1 PE=3 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 9.085e-82 Identity = 157/267 (58.80%), Postives = 195/267 (73.03%), Query Frame = -2 Query: 13 SPTQKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVWIKTK 813 +P +K+ L N+++EE E +G SDAQKQ SVLSNQEKD EE+Y SD K R KKKQ K TE +LDFFLKRYL QLRW S ++I+N+++VYC L+RLINP+++ I+SIQRGEM+L IL+ +K L+EL K G+LII+P RLSVKNDGQF LYQ + I LVHKNK +I +RYQEK Y+DK F EFIA+HQKMT N++KNHYDL VPE IL P RRELR I FNS+++NGM +N VF NN K G+V K K Sbjct: 1573 APNEKQIIGLENRNQEEKEPIGEGGLVSDAQKQGNFKSVLSNQEKDVEEDYDKSDKKKRRKKKQYKSNTEAELDFFLKRYLRFQLRWDD--SLNQRIINNIKVYCLLLRLINPNEIVISSIQRGEMNLDILMIQKDLTLRELMKKGILIIDPVRLSVKNDGQFILYQTISILLVHKNKHQINQRYQEKNYIDKNHFYEFIARHQKMTENKDKNHYDLFVPENILSPNHRRELRIRISFNSRDKNGMHRNAVFLNNVKNCGQVLTKNK 1837
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_GOSBA (Putative membrane protein ycf1 OS=Gossypium barbadense GN=ycf1 PE=3 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 9.085e-82 Identity = 157/267 (58.80%), Postives = 195/267 (73.03%), Query Frame = -2 Query: 13 SPTQKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVWIKTK 813 +P +K+ L N+++EE E +G SDAQKQ SVLSNQEKD EE+Y SD K R KKKQ K TE +LDFFLKRYL QLRW S ++I+N+++VYC L+RLINP+++ I+SIQRGEM+L IL+ +K L+EL K G+LII+P RLSVKNDGQF LYQ + I LVHKNK +I +RYQEK Y+DK F EFIA+HQKMT N++KNHYDL VPE IL P RRELR I FNS+++NGM +N VF NN K G+V K K Sbjct: 1570 APNEKQIIGLENRNQEEKEPIGEGGLVSDAQKQGNFKSVLSNQEKDVEEDYDKSDKKKRRKKKQYKSNTEAELDFFLKRYLRFQLRWDD--SLNQRIINNIKVYCLLLRLINPNEIVISSIQRGEMNLDILMIQKDLTLRELMKKGILIIDPVRLSVKNDGQFILYQTISILLVHKNKHQINQRYQEKNYIDKNHFYEFIARHQKMTENKDKNHYDLFVPENILSPNHRRELRIRISFNSRDKNGMHRNAVFLNNVKNCGQVLTKNK 1834
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_EUCGG (Putative membrane protein ycf1 OS=Eucalyptus globulus subsp. globulus GN=ycf1 PE=3 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 1.835e-74 Identity = 150/265 (56.60%), Postives = 189/265 (71.32%), Query Frame = -2 Query: 13 QKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLL-VPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVWIKTK 804 +K+ EL N+++EE E A + SDAQ Q LGS+ SNQEKD E+Y SDMK R KKK+ K TEV+L FFLKRYL +QLRW S ++++N++++YC L+RLINP ++AI+SIQRGEMSL ILIT+K L EL K G+LIIEP RLS+KNDGQ +YQ + I+L HK+K KI + Y+EK YV K + D+ IA+H KM NR KN YDLL VPE +L KRRRELR ICFNS+ +NG+ KNPVF NN K G K K Sbjct: 1562 EKKSIELENRNQEEKESAIRDNLESDAQNQANLGSLFSNQEKDIGEDYASSDMKKRRKKKEYKSNTEVELYFFLKRYLRIQLRWDD--SLNQRMINNIKIYCLLLRLINPREIAISSIQRGEMSLDILITQKDLTLTELMKKGILIIEPIRLSIKNDGQLIMYQSLNISLFHKSKPKINQIYREKSYVAKINLDKSIARHPKMAENRYKNDYDLLFVPEKVLSTKRRRELRIRICFNSRKRNGIHKNPVFCNNVKNWGEFLDKRK 1824
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_BUXMI (Putative membrane protein ycf1 OS=Buxus microphylla GN=ycf1-A PE=3 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 2.929e-72 Identity = 140/255 (54.90%), Postives = 183/255 (71.76%), Query Frame = -2 Query: 43 TQKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGK 807 T+K+ EL N+++EE E QG SDAQ LG VLSNQ+KD EE+Y GS++K R KKKQ TE +L+F LKRYL QLRW F ++++N+++VYC L+RLINP +++I+SIQ GEMS I+ +K + EL K G+LIIEP RLS+K DGQF +YQ + I+LVHKNK++ R +EK YVDK FDE IA+H+KM G ++NHY+LLVPE I P+RRRELR ICFNS N+N + +NPVFFN K Sbjct: 1542 TEKKSIELENRNQEEKETRGQGDLGSDAQNHGNLGYVLSNQQKDVEEDYAGSNIKKRRKKKQCTSNTEAELNFLLKRYLLFQLRWDDP--FNQRMINNIKVYCLLLRLINPKEISISSIQSGEMSPDII--QKDLTITELIKKGLLIIEPVRLSIKRDGQFIMYQTISISLVHKNKQQTNGRCREKRYVDKNYFDESIARHEKMVGTGDENHYELLVPENISSPRRRRELRIRICFNSGNKNFVDRNPVFFNENK 1792
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_VITVI (Putative membrane protein ycf1 OS=Vitis vinifera GN=ycf1 PE=3 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 3.826e-72 Identity = 143/258 (55.43%), Postives = 186/258 (72.09%), Query Frame = -2 Query: 52 SPTQKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSD--MKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTK--GGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 813 S +K+ +L N+++EE E A Q SD Q Q L SVLSN EKD EE+Y GSD M+ R KKKQ K TE +LD FLKRYL QLRW S +K++N+++VYC L+RLINP ++ I++IQRGEMSL ++ K L EL K G+ IIEP RLSVKNDGQF +YQ +GI+LVHK+K + +RY+E+ YVD K+ D+F A+ QKM GN++KNHYDLLVPE IL P+RRR+ R LICFN +N++G+ +NPVF N Sbjct: 1568 SSNEKKLLKLENRNQEEKESAGQVDLGSDVQNQGNLESVLSNHEKDIEEDYAGSDSDMQKRTKKKQFKNHTEAELDLFLKRYLLFQLRWDD--SLNQKMINNIKVYCLLLRLINPREICISAIQRGEMSLDLIPVHKDLTLTELMKMKRGIFIIEPIRLSVKNDGQFIMYQTIGISLVHKSKYQTNQRYREERYVDNKNCDKFSARCQKMIGNKDKNHYDLLVPENILSPRRRRKFRILICFNLRNRSGVARNPVFCN 1823
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_MORIN (Putative membrane protein ycf1 OS=Morus indica GN=ycf1 PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 4.677e-70 Identity = 143/265 (53.96%), Postives = 184/265 (69.43%), Query Frame = -2 Query: 10 QKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVWIKTKI 804 +K+Y EL Q++ E E ++D + S LSNQEKD EENY S MK KKQS+ E + DF LKRYL QLRW S +K++++++VYC L+R IN ++ IASIQRGE++L +L+ +K F L EL K G+L+IEP RLS KN+GQF +YQ +GI+LVHK+K I +RY+EKG VD K+FDEFI+KHQKMT NR+KNHYDL VPETIL P+ RRELR LICFNS+N+NG+ N F N K V K+KI Sbjct: 1556 EKKYLELEKQNQVEKEYGI----KTDFE------STLSNQEKDIEENYAVSKMKKN--KKQSRTNMEAEFDFLLKRYLLFQLRWDD--SLNKKMIDNIKVYCSLLRPINLREITIASIQRGEINLDLLMIQKNFILTELIKKGILLIEPVRLSRKNEGQFIMYQTIGISLVHKSKHTINQRYREKGLVDTKNFDEFISKHQKMTENRDKNHYDLFVPETILSPRHRRELRILICFNSRNRNGIPSNAFFCNENKVKSPVLNKSKI 1806
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_PLAOC (Putative membrane protein ycf1 OS=Platanus occidentalis GN=ycf1 PE=3 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 3.031e-69 Identity = 135/261 (51.72%), Postives = 182/261 (69.73%), Query Frame = -2 Query: 52 QKEYSELSNQSKEENELADQGTPRSDAQKQVILG----------SVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 804 +K+ EL N+++EE E + QG S+AQ Q LG SVL NQ+K+ EE+Y GSD+K KKKQ K + EV+LD LK+YL QLRW G S ++ILN++++YC L+RLINP ++ I+SIQ+GEMSL I++ K+ EL K G+ IIEP RLS+K DGQF +YQ +GI+LVHK+K + +RY+EK +DK F+ FIA+H+ M GN ++NHYDLLVPE I P+RRRELR L CF+ N N + +NPVF N Sbjct: 1585 KKKSLELENRNQEEKESSSQGDLGSNAQNQGNLGPNAQNQGNLGSVLPNQQKNLEEDYAGSDIKKVRKKKQFKSKAEVELDLLLKKYLLFQLRWNG--SLNQRILNNIKIYCFLLRLINPKEITISSIQKGEMSLGIMLIKRDLTFTELIKRGIFIIEPVRLSIKWDGQFIMYQTIGISLVHKSKHQTNQRYREKRCIDKNHFEGFIARHENMLGNGDENHYDLLVPENISSPRRRRELRILTCFHFLNGNVLDRNPVFCN 1843
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_NASOF (Putative membrane protein ycf1 OS=Nasturtium officinale GN=ycf1-A PE=3 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 7.467e-68 Identity = 135/252 (53.57%), Postives = 171/252 (67.86%), Query Frame = -2 Query: 49 QKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNN 804 +K+ N +KEE E A Q SD +K++ S LSN EK+ EENY S +K R KKQ K TE +LD FL RY QLRW F +KILN+++VYC LVRL NP+++AI+SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI+LVHKNK KI KRY++K Y++KK ++ I K+Q T NR KNHYD VPE IL PKRRRE R LICFN K +N +N F N Sbjct: 1486 EKKSLRFFNLNKEEKESAGQVELESDKEKKINPESALSNHEKNIEENYEESTIKKRKNKKQYKSNTEAELDLFLTRYSRFQLRWNSF--FNQKILNNVKVYCLLVRLKNPNEIAISSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPVRLSVQNDGQRIIYRTIGISLVHKNKHKINKRYKKKSYIEKKTIEKSITKYQNKTVNRKKNHYDFFVPENILSPKRRREFRILICFNLKKKNARDRNSRFNKN 1735
BLAST of CV712546 vs. ExPASy Swiss-Prot
Match: YCF1_CALFG (Putative membrane protein ycf1 OS=Calycanthus floridus var. glaucus GN=ycf1 PE=3 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 7.467e-68 Identity = 136/254 (53.54%), Postives = 178/254 (70.08%), Query Frame = -2 Query: 52 SPTQKEYSELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFN 813 S QK+Y EL N+++EE E QG SD Q NQ+KD E++Y SD+K R KK+QSK +L FFLKRYL QLRW ++ ++++N+++VYC L+RLINP ++AI+SIQRGEM L +++ +K L EL K G+LIIEP RLS+K DGQF +YQ +GI+LVHKNK + +RY+EK YVD+ FD IA+H KM NR +N YDLLVPE IL P+RRRELR LI FNS N+N + +N VFFN Sbjct: 1516 SSNQKDYLELENRNQEEKEEFGQGNLGSDTQ----------NQQKDVEKDYAKSDIKKRGKKRQSKSNKGAELQFFLKRYLLFQLRWDDPLN--QRMMNNVKVYCLLLRLINPREIAISSIQRGEMRLDVMLIQKDLTLTELIKRGILIIEPVRLSIKWDGQFIMYQTIGISLVHKNKHQTNRRYREKRYVDENYFDGSIAQHGKMLVNRAENDYDLLVPENILSPRRRRELRILISFNSGNRNVVDRNLVFFN 1757 The following BLAST results are available for this feature:
BLAST of CV712546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712546 ID=CV712546; Name=CV712546; organism=Citrus sinensis; type=EST; length=817bpback to top |