CV712488
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712488 vs. ExPASy Swiss-Prot
Match: ADF_VITVI (Actin-depolymerizing factor OS=Vitis vinifera PE=2 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.696e-62 Identity = 119/146 (81.51%), Postives = 129/146 (88.36%), Query Frame = -3 Query: 348 MSFRGLSRPNATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 785 MSFRGL NA+SGMGVADHSKN F EL+RKKVHRYVIFKID KTGGPAES+++FAAALPENDCRYAVYDFD+VTSENCQKSKIFFIAWSP +SRIRAKMLYATSK+RFRRELDG+HYEIQATDPTEMDLE LR RA+ Sbjct: 1 MSFRGL---NASSGMGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEFAAALPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRELDGVHYEIQATDPTEMDLEVLRERAH 143
BLAST of CV712488 vs. ExPASy Swiss-Prot
Match: ADF6_ARATH (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana GN=ADF6 PE=1 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.755e-59 Identity = 112/146 (76.71%), Postives = 121/146 (82.88%), Query Frame = -3 Query: 348 MSFRGLSRPNATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 785 MSFRGLSRPNA SGMGVAD SK F ELQRKK HRYV+FKID KTG P ESY+DF A+LP+NDCRYAVYDFD+VTSENCQKSKIFF AWSPSTS IRAK+LY+TSKD+ REL GIHYEIQATDPTE+DLE LR RAN Sbjct: 1 MSFRGLSRPNAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPTEVDLEVLRERAN 146
BLAST of CV712488 vs. ExPASy Swiss-Prot
Match: ADF11_ORYSJ (Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica GN=ADF11 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 2.078e-52 Identity = 99/140 (70.71%), Postives = 114/140 (81.43%), Query Frame = -3 Query: 348 SRPNATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 767 SR NA+SG+GVA K F ELQRKK HRYVIFKID KTG ES++DF +LPE+DCRYA+YDFD+VT ENCQKSKIFF+AWSPS SRIRAKMLYATSK+RFRRELDG+HYEIQATDP+E+D+E LR RA+ Sbjct: 6 SRANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQATDPSELDIELLRERAH 145
BLAST of CV712488 vs. ExPASy Swiss-Prot
Match: ADF2_ORYSJ (Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica GN=ADF2 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.660e-50 Identity = 98/140 (70.00%), Postives = 111/140 (79.29%), Query Frame = -3 Query: 348 SRPNATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 767 S NA+SGMGVA ++ F ELQ KK RYVIFKI+ KTG ESY+DF A+LPENDCRYA+YDFD+VT EN QKSKIFFIAWSPSTSRIRAKMLY+TSKDR ++ELDG HYEIQATDPTE+DLE LR RA+ Sbjct: 6 SHSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQATDPTEVDLEVLRERAH 145
BLAST of CV712488 vs. ExPASy Swiss-Prot
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.105e-45 Identity = 85/137 (62.04%), Postives = 108/137 (78.83%), Query Frame = -3 Query: 348 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 758 NA SGM V D K F EL+ K+ HR++++KI+ K G P ESYEDFAA+LPEN+CRYAVYDFD+VT+ENCQKS+IFFIAW P T+R+R+KM+YA+SKDRF+RELDGI E+QA DPTEM L+ +++RAN Sbjct: 3 NAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLPENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVELQACDPTEMGLDVIQSRAN 139
BLAST of CV712488 vs. ExPASy Swiss-Prot
Match: ADF10_ORYSJ (Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica GN=ADF10 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.443e-45 Identity = 86/130 (66.15%), Postives = 105/130 (80.77%), Query Frame = -3 Query: 348 VADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 737 V + SK+AF EL+R+KVHRYVIFKID KTG P ESY+DF A+LP +DCRYAVYD D+V+ +NC+KSKIFFI+WSPS SRIRAK +YA S+++FR ELDG+H+EIQATDP +MDLE LR RAN Sbjct: 20 VPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLPADDCRYAVYDLDFVSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDMDLEVLRGRAN 149
BLAST of CV712488 vs. ExPASy Swiss-Prot
Match: ADF7_ORYSJ (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 2.721e-44 Identity = 83/137 (60.58%), Postives = 106/137 (77.37%), Query Frame = -3 Query: 348 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 758 NA SGM V D K F EL+ K+ +R++I+KID K G P +Y+DFAA+LP N+CRYA++D+D+VT ENCQKSKIFFIAWSP TSR+R+KM+YA+SKDRF+RELDGI E+QATDPTE+ L+ +R RAN Sbjct: 3 NAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLPANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVIRGRAN 139
BLAST of CV712488 vs. ExPASy Swiss-Prot
Match: ADF1_ARATH (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.641e-44 Identity = 81/137 (59.12%), Postives = 106/137 (77.37%), Query Frame = -3 Query: 348 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 758 NA SGM V D K F EL+ K+ HR++++KI+ K G P ++YE+FAA LP ++CRYA+YDFD+VT+ENCQKSKIFFIAW P +++R+KM+YA+SKDRF+RELDGI E+QATDPTEMDL+ R+RAN Sbjct: 3 NAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRAN 139
BLAST of CV712488 vs. ExPASy Swiss-Prot
Match: ADF4_ARATH (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=2 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 7.916e-44 Identity = 81/137 (59.12%), Postives = 106/137 (77.37%), Query Frame = -3 Query: 348 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 758 NA SGM V D K F EL+ K+ HR++++KI+ K G P +YEDFAA+LP ++CRYA+YDFD+VT+ENCQKSKIFFIAW P +++R+KM+YA+SKDRF+RELDGI E+QATDPTEMDL+ L++R N Sbjct: 3 NAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVLKSRVN 139
BLAST of CV712488 vs. ExPASy Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.764e-43 Identity = 81/137 (59.12%), Postives = 105/137 (76.64%), Query Frame = -3 Query: 348 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXKTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 758 N+ SGM V+D K F EL+ K+ +R+++FKID K G P E+YEDF ++PE++CRYAVYD+D+ T ENCQKSKIFFIAWSP TSR+R+KMLYA+SKDRF+RELDGI E+QATDP+EM L+ ++ R N Sbjct: 3 NSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSLDIIKGRVN 139 The following BLAST results are available for this feature:
BLAST of CV712488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712488 ID=CV712488; Name=CV712488; organism=Citrus sinensis; type=EST; length=850bpback to top |